Guide to the Human Genome
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Search of human proteins with 239742212

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo
sapiens]
         (233 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo ...   498   e-141
gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo ...   498   e-141
gi|239753665 PREDICTED: hypothetical protein [Homo sapiens]           496   e-141
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ...    36   0.025
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]            33   0.16 
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ...    33   0.16 
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ...    33   0.16 
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]         33   0.21 
gi|125490356 zinc finger protein 517 [Homo sapiens]                    33   0.21 
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ...    32   0.47 
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ...    32   0.47 
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ...    32   0.47 
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            32   0.47 
gi|89257348 homeo box HB9 [Homo sapiens]                               32   0.47 
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ...    31   0.79 
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            31   1.0  
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ...    31   1.0  
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ...    31   1.0  
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ...    30   1.8  
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ...    30   1.8  
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]     30   1.8  
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             30   1.8  
gi|157504499 ankyrin repeat domain 47 [Homo sapiens]                   30   1.8  
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ...    29   3.0  
gi|14149712 C1q and tumor necrosis factor related protein 5 prec...    29   3.0  
gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]            29   3.9  
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]            29   3.9  
gi|239750516 PREDICTED: hypothetical protein [Homo sapiens]            29   3.9  
gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo ...    29   3.9  

>gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo
           sapiens]
          Length = 233

 Score =  498 bits (1282), Expect = e-141
 Identities = 233/233 (100%), Positives = 233/233 (100%)

Query: 1   MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
           MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1   MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60

Query: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
           SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120

Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
           IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180

Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
           TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233


>gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo
           sapiens]
          Length = 233

 Score =  498 bits (1282), Expect = e-141
 Identities = 233/233 (100%), Positives = 233/233 (100%)

Query: 1   MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
           MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1   MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60

Query: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
           SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120

Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
           IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180

Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
           TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233


>gi|239753665 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 233

 Score =  496 bits (1277), Expect = e-141
 Identities = 232/233 (99%), Positives = 232/233 (99%)

Query: 1   MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
           MKVNWTSGLCLQFALETEIKYNESNKYR PNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1   MKVNWTSGLCLQFALETEIKYNESNKYRAPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60

Query: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
           SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61  SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120

Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
           IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180

Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
           TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233


>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
           sapiens]
          Length = 368

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 96  PGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGH 155
           P  LR +GH  P    +    ++ G   +PP   G  D G + S E       L P  G 
Sbjct: 240 PSPLR-SGHQVPSPGSVLSPHMLFG---HPPSAAGGGDSGGEGSPE-----PLLPPAQGP 290

Query: 156 DSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAA 200
            +  RP+  RG R RRR + RW +     G A R  L   A  AA
Sbjct: 291 PAPPRPQKARGSRSRRRYLWRWDSAAGVAGGA-RAALSSSAAEAA 334


>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 319

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 69  QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
           QG G LQ  G L  Q+Q G            +  G P P++H  G H ++A      P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237

Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
            G A  GA   Q      Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261


>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
           sapiens]
          Length = 319

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 69  QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
           QG G LQ  G L  Q+Q G            +  G P P++H  G H ++A      P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237

Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
            G A  GA   Q      Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261


>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
           sapiens]
          Length = 319

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 69  QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
           QG G LQ  G L  Q+Q G            +  G P P++H  G H ++A      P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237

Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
            G A  GA   Q      Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261


>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
          Length = 1303

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 105  PQPLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQ 150
            PQP VH L    +   +   P  G GS   G  P++EGE +A  L+
Sbjct: 1243 PQPGVHNLPVPTLFGTVKQTPKTGSGSPFAGNSPAREGEQDAASLK 1288


>gi|125490356 zinc finger protein 517 [Homo sapiens]
          Length = 492

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 9/74 (12%)

Query: 107 PLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRG 166
           P  H +GGH         PP   G  +DG+D             PRV  + LGRP  +  
Sbjct: 123 PWGHPVGGHPA-------PPHPHGGPEDGSDKPTHPRAREHSASPRVLQEDLGRP--VGS 173

Query: 167 GRCRRRRVCRWATR 180
              R R VC  A R
Sbjct: 174 SAPRYRCVCGKAFR 187


>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
           sapiens]
          Length = 321

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 32/157 (20%)

Query: 78  GALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIG---VNPPLGQGSADD 134
           GA  AQ   G  D  L+LP  L+H          L G D  A +    V P         
Sbjct: 34  GAQHAQPANGDADELLELPALLQH----------LAGCDPCASLRDSCVTPATALLLLSH 83

Query: 135 GADPSQEGENEAQQLQPRVGHDSLGR--PRW---LRGG--RCRRR-------RVCRWATR 180
                +     A   +  +G   LG+  P+W    R G  RC  +       RVCR   +
Sbjct: 84  RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQ 143

Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGG 217
           T  GG    R+ ++ A   A        G GVR+RGG
Sbjct: 144 TRGGGGKKPRRGQKAATAGAKSR-----GGGVRSRGG 175


>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
           sapiens]
          Length = 231

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 32/157 (20%)

Query: 78  GALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIG---VNPPLGQGSADD 134
           GA  AQ   G  D  L+LP  L+H          L G D  A +    V P         
Sbjct: 34  GAQHAQPANGDADELLELPALLQH----------LAGCDPCASLRDSCVTPATALLLLSH 83

Query: 135 GADPSQEGENEAQQLQPRVGHDSLGR--PRW---LRGG--RCRRR-------RVCRWATR 180
                +     A   +  +G   LG+  P+W    R G  RC  +       RVCR   +
Sbjct: 84  RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQ 143

Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGG 217
           T  GG    R+ ++ A   A        G GVR+RGG
Sbjct: 144 TRGGGGKKPRRGQKAATAGAKSR-----GGGVRSRGG 175


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 43/129 (33%), Positives = 51/129 (39%), Gaps = 28/129 (21%)

Query: 116 DVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPR--VGHDSLGRPRWLRGGRCRRR- 172
           D+ A +GV    G     +G D S+   +EAQ L  R   GH       WLRGGR R R 
Sbjct: 291 DLGAAVGVR---GLAGLQEGLD-SRHLLHEAQPLHARRRAGHAG---SFWLRGGRDRLRR 343

Query: 173 -----------------RVCRWATRTPEGGWAPRRKL-RRGALLAAPPLEKLWVGVGVRA 214
                            R  R A     GG   RR+  RRG   A P L K+ V V   A
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403

Query: 215 RGGAGVWIL 223
            G    W+L
Sbjct: 404 LGLRWQWVL 412


>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
           sapiens]
          Length = 201

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 33/116 (28%), Positives = 40/116 (34%), Gaps = 30/116 (25%)

Query: 95  LPGALRHAGHPQPL---------VHGLGGHD----VVAGIGVNPPLGQGSADDGADPSQE 141
           LP A    G PQPL         + G GGH        G G  PPLG+G A  G  P+  
Sbjct: 85  LPAARSPRG-PQPLSPRSSWVRGMPGRGGHQRPLFSTLGAGFQPPLGRGGAGRGGAPASL 143

Query: 142 GENEAQQLQPRVGHDSLGRPR---------------WLRGGRCRRRRVCRWATRTP 182
             +      P + +    RP                W R  R RR R C     +P
Sbjct: 144 ASSARPCAAPALPYRERARPAALHWRTPASPSLGSGWFR-RRARRPRSCCGEAASP 198


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 43/129 (33%), Positives = 51/129 (39%), Gaps = 28/129 (21%)

Query: 116 DVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPR--VGHDSLGRPRWLRGGRCRRR- 172
           D+ A +GV    G     +G D S+   +EAQ L  R   GH       WLRGGR R R 
Sbjct: 291 DLGAAVGVR---GLAGLQEGLD-SRHLLHEAQPLHARRRAGHAG---SFWLRGGRDRLRR 343

Query: 173 -----------------RVCRWATRTPEGGWAPRRKL-RRGALLAAPPLEKLWVGVGVRA 214
                            R  R A     GG   RR+  RRG   A P L K+ V V   A
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403

Query: 215 RGGAGVWIL 223
            G    W+L
Sbjct: 404 LGLRWQWVL 412


>gi|89257348 homeo box HB9 [Homo sapiens]
          Length = 401

 Score = 32.0 bits (71), Expect = 0.47
 Identities = 41/164 (25%), Positives = 58/164 (35%), Gaps = 6/164 (3%)

Query: 6   TSGLCLQFALETEIKYNESNKYRTPNDSHPHLL--HLIVFQALHTLHANGGHKDCYHSQE 63
           TSG C   + E       +++ R  + S P LL  H  +      L A GG         
Sbjct: 54  TSGSCSPASSEPPAA--PADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHG 111

Query: 64  DANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHP-QPLVHGLGGHDVVAGIG 122
             +HH   G      A  A    G     L   GA   AG P Q  ++G   +   A   
Sbjct: 112 GPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAA 171

Query: 123 VNPPLGQGSADDGADPSQEGENEAQQLQP-RVGHDSLGRPRWLR 165
                GQ  A   + P  +G + A    P ++G  +    +WLR
Sbjct: 172 AAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLR 215


>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
           sapiens]
          Length = 756

 Score = 31.2 bits (69), Expect = 0.79
 Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 17/89 (19%)

Query: 142 GENEAQQLQPRVGHDSL--------GRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLR 193
           G+    Q +P  G  SL        G  RW   GR     V   A +  EG    R   R
Sbjct: 582 GQELLGQARPGGGLSSLSGGPGGGSGVGRWQLPGRAAAEDVAEAAAKVLEGAGPGRP--R 639

Query: 194 RGALLAAPPLEKLWVGVGVRARGGAGVWI 222
           RG LL A        G+G    GGAG W+
Sbjct: 640 RGQLLRA-------AGLGQARGGGAGAWL 661


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)

Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
           H GH  P  HG G   + A  G GV    G G+               A  GA P++ G 
Sbjct: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 197

Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
             A+   P VG    GR     G  C      RW  R    G AP  +   GA+      
Sbjct: 198 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 248

Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
               +  G R+  G G+   E AV
Sbjct: 249 AAASLARGPRSESGRGLDPAEGAV 272


>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
           sapiens]
          Length = 446

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)

Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
           H GH  P  HG G   + A  G GV    G G+               A  GA P++ G 
Sbjct: 288 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 346

Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
             A+   P VG    GR     G  C      RW  R    G AP  +   GA+      
Sbjct: 347 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 397

Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
               +  G R+  G G+   E AV
Sbjct: 398 AAASLARGPRSESGRGLDPAEGAV 421


>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
           sapiens]
          Length = 446

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)

Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
           H GH  P  HG G   + A  G GV    G G+               A  GA P++ G 
Sbjct: 288 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 346

Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
             A+   P VG    GR     G  C      RW  R    G AP  +   GA+      
Sbjct: 347 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 397

Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
               +  G R+  G G+   E AV
Sbjct: 398 AAASLARGPRSESGRGLDPAEGAV 421


>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
           sapiens]
          Length = 220

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 77  GGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG---QGSAD 133
           G  +  +++ GV + A   P    H  H Q +    GGH   A   V P      Q +  
Sbjct: 109 GERVDERVEAGVGE-AQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA 167

Query: 134 DGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRR 171
            GA  ++ G  E ++ QP   H   G  R  +G R +R
Sbjct: 168 HGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205


>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
           sapiens]
          Length = 220

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 77  GGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG---QGSAD 133
           G  +  +++ GV + A   P    H  H Q +    GGH   A   V P      Q +  
Sbjct: 109 GERVDERVEAGVGE-AQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA 167

Query: 134 DGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRR 171
            GA  ++ G  E ++ QP   H   G  R  +G R +R
Sbjct: 168 HGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205


>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
          Length = 484

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 137 DPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRR 194
           D  +E + + +   P   + +  R R     R RRRR  R  TR+P+   +P+RKL R
Sbjct: 312 DKKKEDKEKKRSKTPPKSYSTARRSR--SASRERRRRRSRSGTRSPKKPRSPKRKLSR 367


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 21/51 (41%), Positives = 23/51 (45%)

Query: 151 PRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAP 201
           PR    S GR     GG  RRRR  R   R+     APRR+ RR    A P
Sbjct: 366 PRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPP 416


>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
          Length = 821

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 1/85 (1%)

Query: 65  ANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVN 124
           A    G   LQ  G L  + +    + A D  G   + G   P      G D   G    
Sbjct: 458 AQPSSGPKSLQFVGVLNGEYESSSSEDASDSDGDSENGGAEPPGSSSGSGDDSGGGSDSG 517

Query: 125 PPLGQGSADDGADPSQEGENEAQQL 149
            P G  S  D  DP  E E E QQ+
Sbjct: 518 TP-GPPSGGDIRDPEPEAEAEPQQV 541


>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
           sapiens]
          Length = 536

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 20/104 (19%)

Query: 96  PGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLGQGSAD------DGADPSQEGENEAQQL 149
           PGA R  G P    HG G   +    G  PP   G A        G+    EG   ++Q 
Sbjct: 45  PGAARGRGKPALGAHGAGCSSMG---GAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQA 101

Query: 150 QPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLR 193
           +P      L RP      R  RRR  R A     G  APR + R
Sbjct: 102 RP------LRRP-----SRRARRRAPRCAPDRRCGDSAPRHRPR 134


>gi|14149712 C1q and tumor necrosis factor related protein 5
           precursor [Homo sapiens]
          Length = 243

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 184 GGWAPRRKLRRGALLAAPPLEKLWVGVGV 212
           GGW     L  GA++   P +++WV VGV
Sbjct: 183 GGWPKPASLSGGAMVRLEPEDQVWVQVGV 211


>gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
           RP   R   C RRR  R   RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237


>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 356

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%)

Query: 123 VNPPLGQGSADDGADPSQEGENEAQQL-----QPRVGHD-------SLGRPRWLRGGRCR 170
           + PP  +G    GA          + L     +P+VG +       SL   R L  GR R
Sbjct: 57  LQPPANRGGGPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSSRKSLSDHRGLGRGRRR 116

Query: 171 RRRVCRWATRTPEG 184
           RR+  RW T+ P G
Sbjct: 117 RRQRRRWGTQAPCG 130


>gi|239750516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 238

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
           RP   R   C RRR  R   RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237


>gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo
           sapiens]
          Length = 238

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
           RP   R   C RRR  R   RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.138    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,302,747
Number of Sequences: 37866
Number of extensions: 608957
Number of successful extensions: 1466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 48
length of query: 233
length of database: 18,247,518
effective HSP length: 99
effective length of query: 134
effective length of database: 14,498,784
effective search space: 1942837056
effective search space used: 1942837056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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