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Search of human proteins with 239742212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo
sapiens]
(233 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo ... 498 e-141
gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo ... 498 e-141
gi|239753665 PREDICTED: hypothetical protein [Homo sapiens] 496 e-141
gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo ... 36 0.025
gi|239756691 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo ... 33 0.16
gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo ... 33 0.16
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 33 0.21
gi|125490356 zinc finger protein 517 [Homo sapiens] 33 0.21
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 32 0.47
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ... 32 0.47
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 32 0.47
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ... 32 0.47
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 32 0.47
gi|89257348 homeo box HB9 [Homo sapiens] 32 0.47
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 31 0.79
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 31 1.0
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 31 1.0
gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo ... 30 1.8
gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo ... 30 1.8
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 30 1.8
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 30 1.8
gi|157504499 ankyrin repeat domain 47 [Homo sapiens] 30 1.8
gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 29 3.0
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 29 3.0
gi|239755994 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
gi|239750516 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo ... 29 3.9
>gi|239748314 PREDICTED: hypothetical protein XP_002346609 [Homo
sapiens]
Length = 233
Score = 498 bits (1282), Expect = e-141
Identities = 233/233 (100%), Positives = 233/233 (100%)
Query: 1 MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1 MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
Query: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
>gi|239742212 PREDICTED: hypothetical protein XP_002342451 [Homo
sapiens]
Length = 233
Score = 498 bits (1282), Expect = e-141
Identities = 233/233 (100%), Positives = 233/233 (100%)
Query: 1 MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1 MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
Query: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
>gi|239753665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 233
Score = 496 bits (1277), Expect = e-141
Identities = 232/233 (99%), Positives = 232/233 (99%)
Query: 1 MKVNWTSGLCLQFALETEIKYNESNKYRTPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
MKVNWTSGLCLQFALETEIKYNESNKYR PNDSHPHLLHLIVFQALHTLHANGGHKDCYH
Sbjct: 1 MKVNWTSGLCLQFALETEIKYNESNKYRAPNDSHPHLLHLIVFQALHTLHANGGHKDCYH 60
Query: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG
Sbjct: 61 SQEDANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAG 120
Query: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR
Sbjct: 121 IGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATR 180
Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN
Sbjct: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGGAGVWILEAAVAPRLGN 233
>gi|239754651 PREDICTED: hypothetical protein XP_002346061 [Homo
sapiens]
Length = 368
Score = 36.2 bits (82), Expect = 0.025
Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 96 PGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGH 155
P LR +GH P + ++ G +PP G D G + S E L P G
Sbjct: 240 PSPLR-SGHQVPSPGSVLSPHMLFG---HPPSAAGGGDSGGEGSPE-----PLLPPAQGP 290
Query: 156 DSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAA 200
+ RP+ RG R RRR + RW + G A R L A AA
Sbjct: 291 PAPPRPQKARGSRSRRRYLWRWDSAAGVAGGA-RAALSSSAAEAA 334
>gi|239756691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
G A GA Q Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
>gi|239751188 PREDICTED: hypothetical protein XP_002347742 [Homo
sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
G A GA Q Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
>gi|239745676 PREDICTED: hypothetical protein XP_002343540 [Homo
sapiens]
Length = 319
Score = 33.5 bits (75), Expect = 0.16
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 69 QGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG 128
QG G LQ G L Q+Q G + G P P++H G H ++A P+G
Sbjct: 188 QGGGGLQLAGVLLHQLQGGQLH---------KEEGRPSPVLHE-GVHQLLAQAAELVPVG 237
Query: 129 QGSADDGADPSQEGENEAQQLQPR 152
G A GA Q Q+++ R
Sbjct: 238 AGEAGAGAFLRQLLARHGQEVEVR 261
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 33.1 bits (74), Expect = 0.21
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 105 PQPLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQ 150
PQP VH L + + P G GS G P++EGE +A L+
Sbjct: 1243 PQPGVHNLPVPTLFGTVKQTPKTGSGSPFAGNSPAREGEQDAASLK 1288
>gi|125490356 zinc finger protein 517 [Homo sapiens]
Length = 492
Score = 33.1 bits (74), Expect = 0.21
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 107 PLVHGLGGHDVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPRVGHDSLGRPRWLRG 166
P H +GGH PP G +DG+D PRV + LGRP +
Sbjct: 123 PWGHPVGGHPA-------PPHPHGGPEDGSDKPTHPRAREHSASPRVLQEDLGRP--VGS 173
Query: 167 GRCRRRRVCRWATR 180
R R VC A R
Sbjct: 174 SAPRYRCVCGKAFR 187
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 32.0 bits (71), Expect = 0.47
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 32/157 (20%)
Query: 78 GALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIG---VNPPLGQGSADD 134
GA AQ G D L+LP L+H L G D A + V P
Sbjct: 34 GAQHAQPANGDADELLELPALLQH----------LAGCDPCASLRDSCVTPATALLLLSH 83
Query: 135 GADPSQEGENEAQQLQPRVGHDSLGR--PRW---LRGG--RCRRR-------RVCRWATR 180
+ A + +G LG+ P+W R G RC + RVCR +
Sbjct: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQ 143
Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGG 217
T GG R+ ++ A A G GVR+RGG
Sbjct: 144 TRGGGGKKPRRGQKAATAGAKSR-----GGGVRSRGG 175
>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
sapiens]
Length = 231
Score = 32.0 bits (71), Expect = 0.47
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 32/157 (20%)
Query: 78 GALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIG---VNPPLGQGSADD 134
GA AQ G D L+LP L+H L G D A + V P
Sbjct: 34 GAQHAQPANGDADELLELPALLQH----------LAGCDPCASLRDSCVTPATALLLLSH 83
Query: 135 GADPSQEGENEAQQLQPRVGHDSLGR--PRW---LRGG--RCRRR-------RVCRWATR 180
+ A + +G LG+ P+W R G RC + RVCR +
Sbjct: 84 RGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSGPRRCLSQDASRSGSRVCRSRPQ 143
Query: 181 TPEGGWAPRRKLRRGALLAAPPLEKLWVGVGVRARGG 217
T GG R+ ++ A A G GVR+RGG
Sbjct: 144 TRGGGGKKPRRGQKAATAGAKSR-----GGGVRSRGG 175
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.0 bits (71), Expect = 0.47
Identities = 43/129 (33%), Positives = 51/129 (39%), Gaps = 28/129 (21%)
Query: 116 DVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPR--VGHDSLGRPRWLRGGRCRRR- 172
D+ A +GV G +G D S+ +EAQ L R GH WLRGGR R R
Sbjct: 291 DLGAAVGVR---GLAGLQEGLD-SRHLLHEAQPLHARRRAGHAG---SFWLRGGRDRLRR 343
Query: 173 -----------------RVCRWATRTPEGGWAPRRKL-RRGALLAAPPLEKLWVGVGVRA 214
R R A GG RR+ RRG A P L K+ V V A
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403
Query: 215 RGGAGVWIL 223
G W+L
Sbjct: 404 LGLRWQWVL 412
>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
sapiens]
Length = 201
Score = 32.0 bits (71), Expect = 0.47
Identities = 33/116 (28%), Positives = 40/116 (34%), Gaps = 30/116 (25%)
Query: 95 LPGALRHAGHPQPL---------VHGLGGHD----VVAGIGVNPPLGQGSADDGADPSQE 141
LP A G PQPL + G GGH G G PPLG+G A G P+
Sbjct: 85 LPAARSPRG-PQPLSPRSSWVRGMPGRGGHQRPLFSTLGAGFQPPLGRGGAGRGGAPASL 143
Query: 142 GENEAQQLQPRVGHDSLGRPR---------------WLRGGRCRRRRVCRWATRTP 182
+ P + + RP W R R RR R C +P
Sbjct: 144 ASSARPCAAPALPYRERARPAALHWRTPASPSLGSGWFR-RRARRPRSCCGEAASP 198
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 32.0 bits (71), Expect = 0.47
Identities = 43/129 (33%), Positives = 51/129 (39%), Gaps = 28/129 (21%)
Query: 116 DVVAGIGVNPPLGQGSADDGADPSQEGENEAQQLQPR--VGHDSLGRPRWLRGGRCRRR- 172
D+ A +GV G +G D S+ +EAQ L R GH WLRGGR R R
Sbjct: 291 DLGAAVGVR---GLAGLQEGLD-SRHLLHEAQPLHARRRAGHAG---SFWLRGGRDRLRR 343
Query: 173 -----------------RVCRWATRTPEGGWAPRRKL-RRGALLAAPPLEKLWVGVGVRA 214
R R A GG RR+ RRG A P L K+ V V A
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRAAGGQERGGRGRRRQQGRRGRRQAGPGLAKVDVDVLAGA 403
Query: 215 RGGAGVWIL 223
G W+L
Sbjct: 404 LGLRWQWVL 412
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 32.0 bits (71), Expect = 0.47
Identities = 41/164 (25%), Positives = 58/164 (35%), Gaps = 6/164 (3%)
Query: 6 TSGLCLQFALETEIKYNESNKYRTPNDSHPHLL--HLIVFQALHTLHANGGHKDCYHSQE 63
TSG C + E +++ R + S P LL H + L A GG
Sbjct: 54 TSGSCSPASSEPPAA--PADRLRAESPSPPRLLAAHCALLPKPGFLGAGGGGGGTGGGHG 111
Query: 64 DANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHP-QPLVHGLGGHDVVAGIG 122
+HH G A A G L GA AG P Q ++G + A
Sbjct: 112 GPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYGYSAAAA 171
Query: 123 VNPPLGQGSADDGADPSQEGENEAQQLQP-RVGHDSLGRPRWLR 165
GQ A + P +G + A P ++G + +WLR
Sbjct: 172 AAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLR 215
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 31.2 bits (69), Expect = 0.79
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 17/89 (19%)
Query: 142 GENEAQQLQPRVGHDSL--------GRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLR 193
G+ Q +P G SL G RW GR V A + EG R R
Sbjct: 582 GQELLGQARPGGGLSSLSGGPGGGSGVGRWQLPGRAAAEDVAEAAAKVLEGAGPGRP--R 639
Query: 194 RGALLAAPPLEKLWVGVGVRARGGAGVWI 222
RG LL A G+G GGAG W+
Sbjct: 640 RGQLLRA-------AGLGQARGGGAGAWL 661
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 30.8 bits (68), Expect = 1.0
Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
H GH P HG G + A G GV G G+ A GA P++ G
Sbjct: 139 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 197
Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
A+ P VG GR G C RW R G AP + GA+
Sbjct: 198 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 248
Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
+ G R+ G G+ E AV
Sbjct: 249 AAASLARGPRSESGRGLDPAEGAV 272
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 30.8 bits (68), Expect = 1.0
Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
H GH P HG G + A G GV G G+ A GA P++ G
Sbjct: 288 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 346
Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
A+ P VG GR G C RW R G AP + GA+
Sbjct: 347 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 397
Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
+ G R+ G G+ E AV
Sbjct: 398 AAASLARGPRSESGRGLDPAEGAV 421
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 30.8 bits (68), Expect = 1.0
Identities = 41/144 (28%), Positives = 51/144 (35%), Gaps = 27/144 (18%)
Query: 101 HAGHPQPLVHGLGGHDVVA--GIGVNPPLGQGS---------------ADDGADPSQEGE 143
H GH P HG G + A G GV G G+ A GA P++ G
Sbjct: 288 HPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGGRSHVAPAGARPAR-GA 346
Query: 144 NEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAPPL 203
A+ P VG GR G C RW R G AP + GA+
Sbjct: 347 RAAE--HPAVG----GRGHGPGGHGCGG---WRWPGRRRWRGLAPGEEANEGAVGVGGGS 397
Query: 204 EKLWVGVGVRARGGAGVWILEAAV 227
+ G R+ G G+ E AV
Sbjct: 398 AAASLARGPRSESGRGLDPAEGAV 421
>gi|239752199 PREDICTED: hypothetical protein XP_002348146 [Homo
sapiens]
Length = 220
Score = 30.0 bits (66), Expect = 1.8
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 77 GGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG---QGSAD 133
G + +++ GV + A P H H Q + GGH A V P Q +
Sbjct: 109 GERVDERVEAGVGE-AQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA 167
Query: 134 DGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRR 171
GA ++ G E ++ QP H G R +G R +R
Sbjct: 168 HGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
>gi|239746724 PREDICTED: hypothetical protein XP_002343820 [Homo
sapiens]
Length = 220
Score = 30.0 bits (66), Expect = 1.8
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 77 GGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLG---QGSAD 133
G + +++ GV + A P H H Q + GGH A V P Q +
Sbjct: 109 GERVDERVEAGVGE-AQRAPVGQAHHSHGQQVAGSEGGHVQGAAARVLPGGHAELQRAVA 167
Query: 134 DGADPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRR 171
GA ++ G E ++ QP H G R +G R +R
Sbjct: 168 HGAVVAEVGRREERRQQPHQPHCGAGVTRRAQGARAQR 205
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 30.0 bits (66), Expect = 1.8
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 137 DPSQEGENEAQQLQPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRR 194
D +E + + + P + + R R R RRRR R TR+P+ +P+RKL R
Sbjct: 312 DKKKEDKEKKRSKTPPKSYSTARRSR--SASRERRRRRSRSGTRSPKKPRSPKRKLSR 367
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 30.0 bits (66), Expect = 1.8
Identities = 21/51 (41%), Positives = 23/51 (45%)
Query: 151 PRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLRRGALLAAP 201
PR S GR GG RRRR R R+ APRR+ RR A P
Sbjct: 366 PRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPP 416
>gi|157504499 ankyrin repeat domain 47 [Homo sapiens]
Length = 821
Score = 30.0 bits (66), Expect = 1.8
Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 65 ANHHQGTGCLQCGGALTAQIQQGVKDFALDLPGALRHAGHPQPLVHGLGGHDVVAGIGVN 124
A G LQ G L + + + A D G + G P G D G
Sbjct: 458 AQPSSGPKSLQFVGVLNGEYESSSSEDASDSDGDSENGGAEPPGSSSGSGDDSGGGSDSG 517
Query: 125 PPLGQGSADDGADPSQEGENEAQQL 149
P G S D DP E E E QQ+
Sbjct: 518 TP-GPPSGGDIRDPEPEAEAEPQQV 541
>gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo
sapiens]
Length = 536
Score = 29.3 bits (64), Expect = 3.0
Identities = 33/104 (31%), Positives = 39/104 (37%), Gaps = 20/104 (19%)
Query: 96 PGALRHAGHPQPLVHGLGGHDVVAGIGVNPPLGQGSAD------DGADPSQEGENEAQQL 149
PGA R G P HG G + G PP G A G+ EG ++Q
Sbjct: 45 PGAARGRGKPALGAHGAGCSSMG---GAPPPTDPGRAGLRSWGAAGSARGSEGRPSSRQA 101
Query: 150 QPRVGHDSLGRPRWLRGGRCRRRRVCRWATRTPEGGWAPRRKLR 193
+P L RP R RRR R A G APR + R
Sbjct: 102 RP------LRRP-----SRRARRRAPRCAPDRRCGDSAPRHRPR 134
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 29.3 bits (64), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 184 GGWAPRRKLRRGALLAAPPLEKLWVGVGV 212
GGW L GA++ P +++WV VGV
Sbjct: 183 GGWPKPASLSGGAMVRLEPEDQVWVQVGV 211
>gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 28.9 bits (63), Expect = 3.9
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
RP R C RRR R RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 28.9 bits (63), Expect = 3.9
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
Query: 123 VNPPLGQGSADDGADPSQEGENEAQQL-----QPRVGHD-------SLGRPRWLRGGRCR 170
+ PP +G GA + L +P+VG + SL R L GR R
Sbjct: 57 LQPPANRGGGPVGAPRVSRRREGLRALKVPGSEPQVGAEVRPSSRKSLSDHRGLGRGRRR 116
Query: 171 RRRVCRWATRTPEG 184
RR+ RW T+ P G
Sbjct: 117 RRQRRRWGTQAPCG 130
>gi|239750516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 28.9 bits (63), Expect = 3.9
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
RP R C RRR R RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237
>gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo
sapiens]
Length = 238
Score = 28.9 bits (63), Expect = 3.9
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 160 RPRWLRGGRCRRRRVCRWATRTPEGGWAP 188
RP R C RRR R RTP GGW P
Sbjct: 211 RPGCSRRSLCCRRRCSR--QRTPRGGWKP 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,302,747
Number of Sequences: 37866
Number of extensions: 608957
Number of successful extensions: 1466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 48
length of query: 233
length of database: 18,247,518
effective HSP length: 99
effective length of query: 134
effective length of database: 14,498,784
effective search space: 1942837056
effective search space used: 1942837056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.