Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239742067
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742067 PREDICTED: hypothetical protein XP_002342405 [Homo
sapiens]
(214 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753602 PREDICTED: hypothetical protein [Homo sapiens] 437 e-123
gi|239748177 PREDICTED: hypothetical protein XP_002346568 [Homo ... 437 e-123
gi|239742067 PREDICTED: hypothetical protein XP_002342405 [Homo ... 437 e-123
gi|4758392 forkhead box D1 [Homo sapiens] 51 8e-07
gi|61966923 forkhead box B2 [Homo sapiens] 47 1e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 45 6e-05
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 44 8e-05
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 44 8e-05
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 43 2e-04
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 43 2e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 43 2e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 43 2e-04
gi|210032580 SET domain containing 1B [Homo sapiens] 43 2e-04
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 42 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 4e-04
gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Ho... 42 5e-04
gi|148762978 similar to CG15216-PA [Homo sapiens] 42 5e-04
gi|33286436 gametogenetin [Homo sapiens] 41 7e-04
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 41 7e-04
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 41 9e-04
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 41 9e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 41 9e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 40 0.001
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 40 0.001
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 40 0.001
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 40 0.001
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 40 0.002
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 40 0.002
gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 40 0.002
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 40 0.002
>gi|239753602 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 437 bits (1123), Expect = e-123
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT
Sbjct: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
Query: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA
Sbjct: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
Query: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT
Sbjct: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
Query: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL
Sbjct: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
>gi|239748177 PREDICTED: hypothetical protein XP_002346568 [Homo
sapiens]
Length = 214
Score = 437 bits (1123), Expect = e-123
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT
Sbjct: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
Query: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA
Sbjct: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
Query: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT
Sbjct: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
Query: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL
Sbjct: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
>gi|239742067 PREDICTED: hypothetical protein XP_002342405 [Homo
sapiens]
Length = 214
Score = 437 bits (1123), Expect = e-123
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT
Sbjct: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
Query: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA
Sbjct: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRA 120
Query: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT
Sbjct: 121 ERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGT 180
Query: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL
Sbjct: 181 VGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 50.8 bits (120), Expect = 8e-07
Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 26/187 (13%)
Query: 21 PLPPQPP---------------LQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPG 65
P PP PP L P P +A AAAAAA A +A S PP P
Sbjct: 260 PAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAA 319
Query: 66 RERQCCL-------LAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLG---QPRRALG 115
E L LP P P+ A + +P S+ ++G P A
Sbjct: 320 AELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAA 379
Query: 116 LAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRF-CCRRSESAGSN 174
A +A A + P P A AP + GGG + L R + S+ S+
Sbjct: 380 AAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSS 439
Query: 175 TAAVGTV 181
+AA+GT+
Sbjct: 440 SAALGTL 446
Score = 34.7 bits (78), Expect = 0.062
Identities = 53/196 (27%), Positives = 68/196 (34%), Gaps = 31/196 (15%)
Query: 27 PLQPEHPGAATA----AAAAAATATSAASTASTSPPRTPRHP---GRERQCC---LLAPP 76
PL P + AA + A AA A A+ A+ PP P P G C L PP
Sbjct: 225 PLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPP 284
Query: 77 LPQPFPSVTYPLLAALARTF----SNTPASLHHLLGQ-PRRALGLAVRAERKASSKPLPG 131
P AA A F P H + R A G A PLP
Sbjct: 285 YAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLP- 343
Query: 132 RRAVAAAPPAGGGGEETISRYP--ILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRR 189
A+A AGG G ++R P I ++ S G AA A A +
Sbjct: 344 ----ASAAKAGGPGASALARSPFSIESII---------GGSLGPAAAAAAAAQAAAAAQA 390
Query: 190 TPAEPCTLVPRSPAST 205
+P+ P +P S+
Sbjct: 391 SPSPSPVAAPPAPGSS 406
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 47.0 bits (110), Expect = 1e-05
Identities = 57/205 (27%), Positives = 79/205 (38%), Gaps = 31/205 (15%)
Query: 15 LPPSPLPLPPQP--PLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCL 72
LP P PPQ P QP HPG AAA AA A +AA+ A S R + P
Sbjct: 194 LPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFP-------- 245
Query: 73 LAPPLPQPFPSVTYPLLAALARTFS-NTPASLHHLLGQPRRALGLAVRAERKASSKPLPG 131
P S AA A T P ++ +++G+ + + +A PL
Sbjct: 246 -----PYGLGSAAAAAAAAAASTSGFKHPFAIENIIGRDYKGV-------LQAGGLPLAS 293
Query: 132 RRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTP 191
P G G S +P + V+ + +A + AA VGP P
Sbjct: 294 VMHHLGYPVPGQLGNVVSSVWPHVGVMDSV------AAAAAAAAAAGVPVGPEYGAFGVP 347
Query: 192 AEP-CTLVPRS-PASTCPLVPSPAL 214
+ C +S PA P+ P+PAL
Sbjct: 348 VKSLCHSASQSLPAMPVPIKPTPAL 372
Score = 32.0 bits (71), Expect = 0.40
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 13 QKLPPSPLPLPPQPPLQPE---HPGAATAAAAAAATATSAASTASTSPP 58
Q LP P+P+ P P L P PG AA+ A S +A+ + P
Sbjct: 357 QSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVCSAAAASP 405
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 44.7 bits (104), Expect = 6e-05
Identities = 32/75 (42%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 17 PSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT-PRHPG-RERQCCLLA 74
P P P PP PP A AAAA A A AA+ A+T+PP P PG R ++ LA
Sbjct: 127 PPPTPAPPPPP--------APVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLA 178
Query: 75 --PPLPQPFPSVTYP 87
PP P P+V P
Sbjct: 179 APPPAPAAPPAVAPP 193
Score = 35.8 bits (81), Expect = 0.028
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 18/80 (22%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAATATS-------------AASTASTSPPRTPR 62
PPSP P P P Q P AA A AA A + AA PP P
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPP 218
Query: 63 HPGRERQCCLLAPPLPQPFP 82
P +++Q PP PQP P
Sbjct: 219 APPQQQQ-----PPPPQPQP 233
Score = 30.4 bits (67), Expect = 1.2
Identities = 50/197 (25%), Positives = 69/197 (35%), Gaps = 15/197 (7%)
Query: 26 PPLQPEHPGAATAAAAAAATATSAA--------STASTSPPRTPRHPGRERQCCLLAPPL 77
PP P AA A AAAA++++A+ T + R R P ER C +
Sbjct: 4 PPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKAR-PDLER-ICRMVRRR 61
Query: 78 PQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRAVAA 137
P P T L L + + S + A V+ R+ ++ P P R A
Sbjct: 62 HGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAA---RVQPPRRGATPPAPPRAPRGA 118
Query: 138 APPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTP-AEPCT 196
A P R +A + A + GPA G R A P
Sbjct: 119 PAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLA 178
Query: 197 LVPRSPASTCPLVPSPA 213
P +PA+ P V PA
Sbjct: 179 APPPAPAAP-PAVAPPA 194
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 44.3 bits (103), Expect = 8e-05
Identities = 54/197 (27%), Positives = 74/197 (37%), Gaps = 37/197 (18%)
Query: 18 SPLPLPPQPPLQPEHPGA------------ATAAAAAAATATSAASTASTSPPRTPRHPG 65
SP P PP P+ P A A +AAAA A +AA+ A + P P
Sbjct: 61 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 66 RERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKAS 125
L PP P P P P+ A A + PAS A A+
Sbjct: 121 TVDTAALKQPPAPPPPPP---PVSAPAAE--AAPPAS--------------AATIAAAAA 161
Query: 126 SKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRF----CCRRSESAGSNTAAVGTV 181
+ + VA AP A ++T S+ P + LC F RR E+ +T A
Sbjct: 162 TAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI--HTGAKAGR 219
Query: 182 GPAGAGRRTPAEPCTLV 198
P+GA + P +L+
Sbjct: 220 VPSGAMKMPTMVPLSLL 236
Score = 29.3 bits (64), Expect = 2.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 11 LFQKLPPSPLPLPPQPPLQPEHP--GAATAAAAAAATATSAASTASTSP 57
L Q P P P P P P AAT AAAAA + ST + +P
Sbjct: 127 LKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAP 175
Score = 28.5 bits (62), Expect = 4.5
Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 18/150 (12%)
Query: 70 CCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVR------AERK 123
C LLAPP +P+L +R S G + L + A +
Sbjct: 7 CTLLAPP---------FPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQG 57
Query: 124 ASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGP 183
+ P +A A PP + +L VL + + +A + AAV P
Sbjct: 58 CAQSPF---QAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPP 114
Query: 184 AGAGRRTPAEPCTLVPRSPASTCPLVPSPA 213
A A T P +P P V +PA
Sbjct: 115 APAAASTVDTAALKQPPAPPPPPPPVSAPA 144
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 44.3 bits (103), Expect = 8e-05
Identities = 54/197 (27%), Positives = 74/197 (37%), Gaps = 37/197 (18%)
Query: 18 SPLPLPPQPPLQPEHPGA------------ATAAAAAAATATSAASTASTSPPRTPRHPG 65
SP P PP P+ P A A +AAAA A +AA+ A + P P
Sbjct: 61 SPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAS 120
Query: 66 RERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKAS 125
L PP P P P P+ A A + PAS A A+
Sbjct: 121 TVDTAALKQPPAPPPPPP---PVSAPAAE--AAPPAS--------------AATIAAAAA 161
Query: 126 SKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRF----CCRRSESAGSNTAAVGTV 181
+ + VA AP A ++T S+ P + LC F RR E+ +T A
Sbjct: 162 TAVVAPTSTVAVAPVASALEKKTKSKGPYICALCAKEFKNGYNLRRHEAI--HTGAKAGR 219
Query: 182 GPAGAGRRTPAEPCTLV 198
P+GA + P +L+
Sbjct: 220 VPSGAMKMPTMVPLSLL 236
Score = 29.3 bits (64), Expect = 2.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 11 LFQKLPPSPLPLPPQPPLQPEHP--GAATAAAAAAATATSAASTASTSP 57
L Q P P P P P P AAT AAAAA + ST + +P
Sbjct: 127 LKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAP 175
Score = 28.5 bits (62), Expect = 4.5
Identities = 35/150 (23%), Positives = 51/150 (34%), Gaps = 18/150 (12%)
Query: 70 CCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVR------AERK 123
C LLAPP +P+L +R S G + L + A +
Sbjct: 7 CTLLAPP---------FPVLGLDSRGVGGLMNSFPPPQGHAQNPLQVGAELQSRFFASQG 57
Query: 124 ASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGP 183
+ P +A A PP + +L VL + + +A + AAV P
Sbjct: 58 CAQSPF---QAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPP 114
Query: 184 AGAGRRTPAEPCTLVPRSPASTCPLVPSPA 213
A A T P +P P V +PA
Sbjct: 115 APAAASTVDTAALKQPPAPPPPPPPVSAPA 144
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 43.1 bits (100), Expect = 2e-04
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 16 PPSPLPLPPQPPLQPEHP-------GAATAAAAAAATATSAASTAS-----TSPPRTPRH 63
PP+P P PP + HP G +++ + TA++ S A+ T+PPR P+
Sbjct: 460 PPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKK 519
Query: 64 PGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERK 123
RE PP P+P + T P A T + PA +A E
Sbjct: 520 --RE-----YPPPPPEPAATPTSPATAVSPATAAG-PA--------------MATTTEEA 557
Query: 124 ASSKPLPGRRAVAAAPPAGGGG 145
P GR A P GG G
Sbjct: 558 KGRNPRAGRTLTYTAKPVGGIG 579
Score = 33.5 bits (75), Expect = 0.14
Identities = 14/42 (33%), Positives = 30/42 (71%)
Query: 15 LPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTS 56
L +PLPLPP +P TAA++++++++S++S++S++
Sbjct: 60 LTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSA 101
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 43.1 bits (100), Expect = 2e-04
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 34/142 (23%)
Query: 16 PPSPLPLPPQPPLQPEHP-------GAATAAAAAAATATSAASTAS-----TSPPRTPRH 63
PP+P P PP + HP G +++ + TA++ S A+ T+PPR P+
Sbjct: 460 PPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGGGSGTASTGGSQAASVITYTAPPRPPKK 519
Query: 64 PGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERK 123
RE PP P+P + T P A T + PA +A E
Sbjct: 520 --RE-----YPPPPPEPAATPTSPATAVSPATAAG-PA--------------MATTTEEA 557
Query: 124 ASSKPLPGRRAVAAAPPAGGGG 145
P GR A P GG G
Sbjct: 558 KGRNPRAGRTLTYTAKPVGGIG 579
Score = 33.5 bits (75), Expect = 0.14
Identities = 14/42 (33%), Positives = 30/42 (71%)
Query: 15 LPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTS 56
L +PLPLPP +P TAA++++++++S++S++S++
Sbjct: 60 LTSAPLPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSA 101
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 43.1 bits (100), Expect = 2e-04
Identities = 69/221 (31%), Positives = 83/221 (37%), Gaps = 47/221 (21%)
Query: 15 LPPSPLP-LPPQPPLQPEHPGAATAAAAA-------AATATSAASTASTSP--PRTPRHP 64
L PSP P L P P L P PGAA A++ A ++T S AS SP TP
Sbjct: 1598 LAPSPAPPLAPLPVLAPS-PGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLA 1656
Query: 65 GRERQCCLLAP-PLPQPFP--SVTYPLLAALARTF--SNTPASLHHLLGQPRRALGLAVR 119
Q L AP P P P P + T L ALA T S+ +L G P+
Sbjct: 1657 PSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTL 1716
Query: 120 AERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVG 179
+ ASS + ++ AP G +T+S P A
Sbjct: 1717 SLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLAP------------------APPLAPAS 1758
Query: 180 TVGPAGAGRRTPAEPCTLVPRS-------PASTCPLVPSPA 213
VGPA PA TL P S PAS L SPA
Sbjct: 1759 PVGPA------PAHTLTLAPASSSASLLAPASVQTLTLSPA 1793
Score = 38.5 bits (88), Expect = 0.004
Identities = 54/211 (25%), Positives = 76/211 (36%), Gaps = 20/211 (9%)
Query: 23 PPQPPLQPEHPGAATAAAAAAATATSA-----ASTASTSPPRTPRHPGRERQCCLLAPPL 77
PP P+ P PG + A + A+ + SA A+ S S +TP HP P L
Sbjct: 1478 PPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGL 1537
Query: 78 PQPFPSVTYPLL---AALARTFSNTP------ASLHHLLGQPRRALG-----LAVRAERK 123
P+L +ALA F + P ASL +AL +A
Sbjct: 1538 NSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAI 1597
Query: 124 ASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGP 183
+ P P + P+ G S + V+ SA A + P
Sbjct: 1598 LAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAP 1657
Query: 184 AGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
+ PA + +P SPAST L +PAL
Sbjct: 1658 SSTQTMLPAPVPSPLP-SPASTQTLALAPAL 1687
Score = 37.7 bits (86), Expect = 0.007
Identities = 45/149 (30%), Positives = 61/149 (40%), Gaps = 33/149 (22%)
Query: 16 PPSPLPLPPQPP-----------LQPEH---PGAATAAAAAAATATSAASTASTSPPRTP 61
PP+P+ L P PP + P + P AAT + ATAT+ A A T P
Sbjct: 1110 PPAPVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATATTTAVPAPTPAP--- 1166
Query: 62 RHPGRERQCCLLAPPLPQPFPS---VTYPLLAALA-RTFSNTPAS---LHHLLGQPRRAL 114
Q +L+P + PS V+ LA+LA R +N S + G
Sbjct: 1167 -------QRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQIQGNKLTLT 1219
Query: 115 GLAVRAERKASSKPLPGRRAVAAAPPAGG 143
G VR + A +P P +R V AGG
Sbjct: 1220 GAQVR--QLAVGQPRPLQRNVVHLVSAGG 1246
Score = 34.3 bits (77), Expect = 0.081
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 14/65 (21%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAP 75
PP P PL P PPL A A T T+ T STSPP+ R GR + P
Sbjct: 2969 PPHPSPLTPLPPL------LVCPTATVANTVTTV--TISTSPPKRKR--GRPPK----NP 3014
Query: 76 PLPQP 80
P P+P
Sbjct: 3015 PSPRP 3019
Score = 31.2 bits (69), Expect = 0.69
Identities = 57/217 (26%), Positives = 78/217 (35%), Gaps = 45/217 (20%)
Query: 2 VINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTP 61
V+ + +T+ PSPLP P A+ A A + A T S P
Sbjct: 1654 VLAPSSTQTMLPAPVPSPLPSP--------------ASTQTLALAPALAPTLGGSSP--- 1696
Query: 62 RHPGRERQCCLLAPPLPQ-PFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLA--- 117
Q L PQ PFP+ +T S TPAS L+ P + L LA
Sbjct: 1697 ------SQTLSLGTGNPQGPFPT----------QTLSLTPAS--SLVPTPAQTLSLAPGP 1738
Query: 118 -VRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTA 176
+ + S P P +A A P G T++ P ++ + A
Sbjct: 1739 PLGPTQTLSLAPAP---PLAPASPVGPAPAHTLTLAPASS--SASLLAPASVQTLTLSPA 1793
Query: 177 AVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPA 213
V T+GPA A A T P S AS+ + S A
Sbjct: 1794 PVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGA 1830
Score = 29.6 bits (65), Expect = 2.0
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 26/113 (23%)
Query: 14 KLPPSPLPLPPQP---------PLQPEHPGAATAA--AAAAATATSAASTASTSPPRTPR 62
+L P P PL PQP P++ G A T +SA S S + P
Sbjct: 2911 QLIPGPQPLGPQPVHRPNPLLSPVEKRRRGRPPKARDLPIPGTISSAGDGNSESRTQPPP 2970
Query: 63 HPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALG 115
HP +P P P PLL T +NT ++ P+R G
Sbjct: 2971 HP---------SPLTPLP------PLLVCPTATVANTVTTVTISTSPPKRKRG 3008
Score = 28.1 bits (61), Expect = 5.8
Identities = 27/91 (29%), Positives = 32/91 (35%), Gaps = 7/91 (7%)
Query: 16 PPSPLPLPPQPP----LQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCC 71
PP P+ LPP P L P + + T S T P P
Sbjct: 1066 PPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSS 1125
Query: 72 LLAPPLPQPFPSVTYPLLAALARTFSNTPAS 102
L PL P P T+P A A T S T A+
Sbjct: 1126 SLLKPLTVP-PGYTFP--PAAATTTSTTTAT 1153
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 42.7 bits (99), Expect = 2e-04
Identities = 59/219 (26%), Positives = 75/219 (34%), Gaps = 45/219 (20%)
Query: 16 PPSPL-------PLPPQPPLQPEHPGAA-TAAAAAAATATSAASTASTSPPRTPRHPGRE 67
PPSP P PP L+P G+A + A AA A +A + + P P P
Sbjct: 107 PPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAAL 166
Query: 68 RQCCLLAP---PLPQPFPSVTYPLLAALARTFSNTPASL--HHLLGQPRRALGLAVRAER 122
P P P P P P A+T + + A L HH A +++
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAA-----APAVSLVNNG 221
Query: 123 KASSKPLPGRRA---VAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVG 179
A+ PLP A V PP G + +A S AA
Sbjct: 222 PAALLPLPKPAAPGTVIQTPPFVGAAAPP-------------------APAAPSPPAAPA 262
Query: 180 TVGPAGAGRRTPAEPCTLV-----PRSPASTCPLVPSPA 213
PA A P P TL P P + P VP PA
Sbjct: 263 PAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPA 301
Score = 37.7 bits (86), Expect = 0.007
Identities = 42/141 (29%), Positives = 56/141 (39%), Gaps = 14/141 (9%)
Query: 1 MVINKTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT 60
MVI T + L PSP +PP P P G AA A + S TA+TS R
Sbjct: 373 MVIGPTMQGAL-----PSPAAVPPPAPGTPT--GLPKGAAGAVTQSLSRTPTATTSGIRA 425
Query: 61 PRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALG-LAVR 119
P +LAP LPQP + T L + LL P++AL + +
Sbjct: 426 TLTP------TVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQ 479
Query: 120 AERKASSKPLPGRRAVAAAPP 140
A + + P +APP
Sbjct: 480 AHAQPQTTMAPRPATPTSAPP 500
Score = 33.9 bits (76), Expect = 0.11
Identities = 37/134 (27%), Positives = 46/134 (34%), Gaps = 14/134 (10%)
Query: 19 PLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPP-- 76
PLP P P + P AAA A A S + + + P P L PP
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGH 286
Query: 77 ---LPQPFPSVTYPLLAALARTFSNTPASL------HHLLGQPRRALGLAVRAERKASSK 127
P P+V P A + PA + GQP A A +
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346
Query: 128 PLPGRRAVAAAPPA 141
P +R V AAPPA
Sbjct: 347 P---KRVVQAAPPA 357
Score = 32.0 bits (71), Expect = 0.40
Identities = 51/201 (25%), Positives = 65/201 (32%), Gaps = 34/201 (16%)
Query: 35 AATAAAAAAATATSAASTASTSPPRT--------PRHPGRERQCCLLAPPLPQPFPSVTY 86
A A A AA A A A PP P+ PG L P P P +
Sbjct: 68 AGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR 127
Query: 87 PLLAALARTFSNTPASLHHLLG---------QPRRALGLAVRAERKASSKPLPGRRAVAA 137
P A + + PA+ G +P LA RA P PG
Sbjct: 128 PPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG-PGPGP 186
Query: 138 APPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAG-AGRRTPAEPCT 196
PAG G +T++ L S A + ++ GPA PA P T
Sbjct: 187 GKPAGPGAAQTLNGSAAL----------LNSHHAAAPAVSLVNNGPAALLPLPKPAAPGT 236
Query: 197 LVPRSP-----ASTCPLVPSP 212
++ P A P PSP
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSP 257
Score = 31.6 bits (70), Expect = 0.53
Identities = 52/206 (25%), Positives = 62/206 (30%), Gaps = 29/206 (14%)
Query: 17 PSPLPLPPQPPLQPEHPGAATAA-----------AAAAATATSAASTASTSPPRTPRHPG 65
P P P P P +P PGAA AAA A + A+ P P PG
Sbjct: 176 PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPG 235
Query: 66 RERQ----CCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALG--LAVR 119
Q APP P P AA A P + L P G A
Sbjct: 236 TVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAP 295
Query: 120 AERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVG 179
A ++ G A AP GG +S P +A + V
Sbjct: 296 AVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP------------GPGAAAAAPAPGVK 343
Query: 180 TVGPAGAGRRTPAEPCTLVPRSPAST 205
P + P TL PAST
Sbjct: 344 AESPKRVVQAAPPAAQTLAASGPAST 369
Score = 29.6 bits (65), Expect = 2.0
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 17 PSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRT--PRHPGRERQCCLLA 74
P P P ++ E P AA AA +A+ AST+ P G +
Sbjct: 331 PGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP 390
Query: 75 PPLPQPFPSVTYPLLAALARTFSNTPAS 102
PP P + A+ ++ S TP +
Sbjct: 391 PPAPGTPTGLPKGAAGAVTQSLSRTPTA 418
Score = 27.3 bits (59), Expect = 10.0
Identities = 26/99 (26%), Positives = 33/99 (33%), Gaps = 12/99 (12%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAA-----------AATATSAASTASTSPPRTPRHP 64
PP P P P P HP AA A +A A A + A+ P P
Sbjct: 270 PPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Query: 65 GRERQCCLLAPPLPQPFPSVTYPLLAALARTF-SNTPAS 102
G AP + P A+T ++ PAS
Sbjct: 330 GPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAS 368
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 42.7 bits (99), Expect = 2e-04
Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 28/150 (18%)
Query: 12 FQKLPPSPLPLPPQP--PLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQ 69
F LPP P P PPQP P+ P P A T PP P PG
Sbjct: 687 FPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPAHPAVT-------VPPPPLPAPPGVPPP 739
Query: 70 CCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
L PPLP PFP +P++ + H+LG + ++ + + + S+ +
Sbjct: 740 PIL--PPLP-PFPPGLFPVM----------QVDMSHVLGGQWGGMPMSFQMQTQVLSRLM 786
Query: 130 PGRRA------VAAAPPAGGGGEETISRYP 153
G+ A +AAA A G + ++ P
Sbjct: 787 TGQGACPYPPFMAAAAAAASAGLQFVNLPP 816
Score = 32.7 bits (73), Expect = 0.24
Identities = 42/126 (33%), Positives = 48/126 (38%), Gaps = 17/126 (13%)
Query: 17 PSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPP 76
P PLPLP PL A A A A AS PP R PGR R+ +PP
Sbjct: 1430 PLPLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLASCPPP-MKRKPGRPRR----SPP 1484
Query: 77 --LPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRA 134
L P V P AAL R P GQP+ + + R + L R A
Sbjct: 1485 SMLSLDGPLVRPPAGAALGRELLLLP-------GQPQTPVFPSTHDPRTVT---LDFRNA 1534
Query: 135 VAAAPP 140
APP
Sbjct: 1535 GIPAPP 1540
Score = 31.6 bits (70), Expect = 0.53
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAAST------ASTSPPRTP 61
PP LPLP QPPL P P + T ++ + A PP TP
Sbjct: 1270 PPMMLPLPLQPPLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTP 1321
Score = 29.6 bits (65), Expect = 2.0
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 14 KLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCL- 72
++P +P+ P PGAA AA + T PP P P Q
Sbjct: 645 EMPSAPITSADCPKPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFP 704
Query: 73 LAPPLPQP-------FPSVTYP 87
+ PPLP P P+VT P
Sbjct: 705 MPPPLPPPPPPPPPAHPAVTVP 726
Score = 28.9 bits (63), Expect = 3.4
Identities = 29/110 (26%), Positives = 38/110 (34%), Gaps = 24/110 (21%)
Query: 15 LPPSPLPLPPQPPLQPE-----HPGAA-----------TAAAAAAATATSAASTASTSPP 58
LPP P PP PP +PE HP T + + + T +P
Sbjct: 1282 LPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTPGLCGSLAKSQSTETVPATPG 1341
Query: 59 RTPRHPGRERQCCLLAPPL-------PQPFPSVTY-PLLAALARTFSNTP 100
P G L +P + P P PS++ L R FS TP
Sbjct: 1342 GEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTP 1391
Score = 28.9 bits (63), Expect = 3.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 15 LPPSPLPLPPQPPLQP 30
LPP P P PP PP++P
Sbjct: 1543 LPPQPPPPPPPPPVEP 1558
Score = 28.5 bits (62), Expect = 4.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 15 LPPSPLPLPPQPPLQPEHP 33
+P P PLPPQPP P P
Sbjct: 1536 IPAPPPPLPPQPPPPPPPP 1554
Score = 28.1 bits (61), Expect = 5.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 17 PSPLPLPPQPPLQPEHPG 34
P+P PLPP PL E PG
Sbjct: 432 PAPPPLPPAEPLAKEKPG 449
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 42.4 bits (98), Expect = 3e-04
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 16 PPSPLPLPPQ----PPLQPEHPGAATAAAAAAATATSAASTASTS 56
PP PLP PP L+P P ATAA AAA +T+A+STAS++
Sbjct: 1263 PPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTAASSTASSA 1307
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.0 bits (97), Expect = 4e-04
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 23 PPQ--PPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLP-- 78
PPQ PP + P +++ AT + +A+ S +PP P P C LA PLP
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLA 341
Query: 79 QPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRAVAAA 138
P PS P L L + P+ LG P + S P P +A
Sbjct: 342 PPSPSAP-PSLQTLPSPPATPPSQATTSLGSP--------TLQATHSFLPSPPLSPLATP 392
Query: 139 PP 140
PP
Sbjct: 393 PP 394
Score = 34.3 bits (77), Expect = 0.081
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 18 SPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPP-RTPRHPGRERQCCLLAPP 76
+P PP PP+Q A+ + +AT S A + +PP + P P A P
Sbjct: 438 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 497
Query: 77 LPQPFPSVTYPLLAALARTFSNTPASL 103
PQ P + P L LA+ P +L
Sbjct: 498 PPQAPPPLAAPPL-QLAKPPPQAPPAL 523
Score = 33.9 bits (76), Expect = 0.11
Identities = 23/74 (31%), Positives = 28/74 (37%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAP 75
PP P PPLQ P A A + S ++ P + P P LA
Sbjct: 498 PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 557
Query: 76 PLPQPFPSVTYPLL 89
P PQ P + PLL
Sbjct: 558 PPPQAPPVLAAPLL 571
Score = 32.7 bits (73), Expect = 0.24
Identities = 58/221 (26%), Positives = 78/221 (35%), Gaps = 50/221 (22%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAA-------------------AAAAATATSAASTASTS 56
P SP P PP P GAA A +A A T +A T+S +
Sbjct: 30 PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN 89
Query: 57 PPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGL 116
P P GR + APP P P+ + + + P LGQ GL
Sbjct: 90 PASRPPASGRGER----APPAKNTSPG---PVSSPGRASGTTRPGP----LGQK----GL 134
Query: 117 AVRAER---KASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGS 173
+ AE + + P R A++A G + P + RRS +AG+
Sbjct: 135 RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAM---------ARRSRAAGT 185
Query: 174 NTAAVGTVGPAGAGR-RTPAEPCTLVPRSPASTCPLVPSPA 213
VG PA + R R P E S + PSPA
Sbjct: 186 E---VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPA 223
Score = 32.7 bits (73), Expect = 0.24
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 12 FQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTP-----RHPGR 66
F P P+ P PP P +AT + A + + SPP +P P
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Query: 67 ERQCCLLAPPL------PQPFPSVTYPLLAAL 92
+ L APPL PQ P++ P L AL
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALATPPLQAL 531
Score = 32.3 bits (72), Expect = 0.31
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 13/77 (16%)
Query: 16 PPS----PLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCC 71
PPS PL +PP PP P +AT A + + PP+ P
Sbjct: 471 PPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP--------A 522
Query: 72 LLAPPLPQ-PFPSVTYP 87
L PPL P P ++P
Sbjct: 523 LATPPLQALPSPPASFP 539
Score = 32.0 bits (71), Expect = 0.40
Identities = 41/142 (28%), Positives = 51/142 (35%), Gaps = 28/142 (19%)
Query: 15 LPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRE------R 68
LP SPL PP P+ P A + A+ T PR P PG + R
Sbjct: 550 LPMSPLATPP-----PQAPPVLAAPLLQVPPSPPASPTLQA--PRRPPTPGPDTSVSGPR 602
Query: 69 QCCLLA---PPLPQPFPSVTY--PLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERK 123
LA PP P PS T P LA + + ++TP L G E
Sbjct: 603 LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR----------GYDSGPEGG 652
Query: 124 ASSKPLPGRRAVAAAPPAGGGG 145
A++ P P A P A G
Sbjct: 653 AAASPPPDAELAACHPAAWSRG 674
Score = 31.6 bits (70), Expect = 0.53
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 10/75 (13%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAA-----AAAATATSAASTASTSPPRTP-----RHPG 65
PPSP PP PL P A A A A + S A SPP +P P
Sbjct: 408 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 467
Query: 66 RERQCCLLAPPLPQP 80
+ L APPL P
Sbjct: 468 SQAPPSLAAPPLQVP 482
Score = 31.2 bits (69), Expect = 0.69
Identities = 45/196 (22%), Positives = 59/196 (30%), Gaps = 33/196 (16%)
Query: 19 PLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLP 78
PL PP PP P AT + A A SPP +PP+
Sbjct: 404 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP--------------SPPVQ 449
Query: 79 QPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRAVAAA 138
PF P ++ A S P SL A L V AS P A
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSL--------AAPPLQVPPSPPASPPMSPSATPPPQA 501
Query: 139 PPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLV 198
PP +++ P + + + PA + P P +
Sbjct: 502 PPPLAAPPLQLAKPP-----------PQAPPALATPPLQALPSPPASFPGQAPFSPSASL 550
Query: 199 PRSPASTCPLVPSPAL 214
P SP +T P P L
Sbjct: 551 PMSPLATPPPQAPPVL 566
Score = 29.3 bits (64), Expect = 2.6
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 38 AAAAAAATATSAASTASTSP-----PRTPRHPGRERQCCL--LAPPLPQPFPSVTYPLLA 90
A+ + +++AT +S A + P PR P HP + + L L PP P P L
Sbjct: 238 ASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG 297
Query: 91 ALARTFSNTPASLHHLLGQPRRALGLAVRAERKAS--SKPLPGRRAVAAAPPA 141
L+ + TP+ L Q L + + PLP +APP+
Sbjct: 298 PLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPS 350
Score = 28.1 bits (61), Expect = 5.8
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 24 PQPPLQPEHPGAATAAAAAAATATSAASTASTSPP------RTPRHPGRERQCCLLAPPL 77
P PPL P A A A A + SPP +P+ P L AP
Sbjct: 382 PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFS 441
Query: 78 PQPFPSVTYP 87
P P P V P
Sbjct: 442 PPPSPPVQAP 451
>gi|4505195 mitogen-activated protein kinase kinase kinase 11 [Homo
sapiens]
Length = 847
Score = 41.6 bits (96), Expect = 5e-04
Identities = 59/214 (27%), Positives = 77/214 (35%), Gaps = 38/214 (17%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAATATSA-------------ASTASTSPPRTPR 62
PP+ PP+P L+PE P A +++ T AS + P
Sbjct: 606 PPALNGNPPRPSLEPEEPKRPVPAERGSSSGTPKLIQRALLRGTALLASLGLGRDLQPPG 665
Query: 63 HPGRERQCCLLAPPLPQPFPSVT----YPLLAALARTFSNTPASLHHLLGQPRRALGLAV 118
PGRER PP P P P T PL+ +T + P LL LG+ V
Sbjct: 666 GPGRERGESPTTPPTPTPAPCPTEPPPSPLICFSLKTPDSPPTPAPLLLD-----LGIPV 720
Query: 119 RAERKASSKPLPGRRAVAAAPPAG----GGGEETISRYPILRVLCRCRFCCRRSE----- 169
S + R +PP G G R P L ++ R R RS
Sbjct: 721 GQRSAKSPRREEEPRGGTVSPPPGTSRSAPGTPGTPRSPPLGLISRPRPSPLRSRIDPWS 780
Query: 170 --SAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRS 201
SAG + + + P A RR P TL P S
Sbjct: 781 FVSAGPRPSPLPS--PQPAPRRA---PWTLFPDS 809
>gi|148762978 similar to CG15216-PA [Homo sapiens]
Length = 976
Score = 41.6 bits (96), Expect = 5e-04
Identities = 41/123 (33%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 17 PSPLPLPPQPPLQPEHPGAAT--------AAAAAAATATSAASTASTSPPRTPRHPGRER 68
P+ LP PP + P A T A + +A A + A SPP PR GRE
Sbjct: 62 PAMETLPEPPPPESAVPRARTREAEPRRRARSKSAPRAPPGLTPAPASPPVLPRR-GREA 120
Query: 69 QCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKP 128
Q A P+ P+ YP L ALA P L G P R L A R A +P
Sbjct: 121 QRAARAEASPRREPA--YPALRALANELH--PIKLQPQRGGPGRVAPLCAAAGRCAPPEP 176
Query: 129 LPG 131
G
Sbjct: 177 PAG 179
Score = 31.2 bits (69), Expect = 0.69
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 14/84 (16%)
Query: 14 KLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
+ PP P P PP+ P A AA A A SP R P +P L
Sbjct: 98 RAPPGLTPAPASPPVLPRRGREAQRAARAEA-----------SPRREPAYPALRALANEL 146
Query: 74 APPLPQP---FPSVTYPLLAALAR 94
P QP P PL AA R
Sbjct: 147 HPIKLQPQRGGPGRVAPLCAAAGR 170
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 41.2 bits (95), Expect = 7e-04
Identities = 40/132 (30%), Positives = 50/132 (37%), Gaps = 21/132 (15%)
Query: 16 PPS--PLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
PP+ P PLP PPL P +A A AA A A A +P +P
Sbjct: 451 PPALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAP---------- 500
Query: 74 APPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRR 133
AP + +P P V+ P AA P + RA A R + P R
Sbjct: 501 APTVAEPSPPVSAPAPAA-------APIKTRTRRNKGSRAARGATRKDGLHGDG--PRER 551
Query: 134 AVAAAPPAGGGG 145
A A P + GGG
Sbjct: 552 ATATVPDSSGGG 563
Score = 33.1 bits (74), Expect = 0.18
Identities = 36/130 (27%), Positives = 43/130 (33%), Gaps = 13/130 (10%)
Query: 19 PLPLPPQPPLQPEH-PGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPL 77
P PP PP Q PG A A A T + P P PG + PPL
Sbjct: 386 PWGSPPPPPEQIHSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPGPPGLQE-----LPPL 440
Query: 78 PQPFPSVTYPLLAALARTFSNTP---ASLHH----LLGQPRRALGLAVRAERKASSKPLP 130
P P P T A P L H L AL A+ A++ + P P
Sbjct: 441 PPPTPPPTLQPPALQPTPLPVAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAP 500
Query: 131 GRRAVAAAPP 140
+PP
Sbjct: 501 APTVAEPSPP 510
Score = 29.6 bits (65), Expect = 2.0
Identities = 49/183 (26%), Positives = 63/183 (34%), Gaps = 55/183 (30%)
Query: 16 PPSPLPL-PPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLA 74
PPS PL PP PP Q S T +P + P
Sbjct: 136 PPSLRPLKPPPPPRQ-----------------LSVKDTVPRAPSQFP------------- 165
Query: 75 PPL-----PQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
PPL P P PS P + + TPAS P R + + +
Sbjct: 166 PPLETWKPPPPLPSERQPADRRITPALA-TPAS-------PPTESQAGPRNQGQTAG--- 214
Query: 130 PGRRAVAAAPPAGGGGE--ETISRYPILRVLCRCRFCCRRS---ESAGSNTAAVGTVGPA 184
RA APP G GE + L +LC+ F R S +A S+ AA ++G
Sbjct: 215 ---RARGGAPPHAGEGEMAQPADSESGLSLLCKITFKSRPSLAPPAASSSLAAKASLGGG 271
Query: 185 GAG 187
G G
Sbjct: 272 GGG 274
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 41.2 bits (95), Expect = 7e-04
Identities = 63/204 (30%), Positives = 74/204 (36%), Gaps = 40/204 (19%)
Query: 21 PLPPQPPL--QPEHPGAATAAAAAAATATSAA----STASTSPPRTPRHPGRERQCCLLA 74
P P PPL P+ A+AA A S +TAST+PPR PR P R L
Sbjct: 68 PAPTWPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPR-PRRPGGPAL-- 124
Query: 75 PPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRA 134
P P+P P PAS +PRR R R + KP A
Sbjct: 125 RPTPRPCAGPAPP------------PASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAA 172
Query: 135 VAA--AP-------PAGGGGEETISRYPILRVLC-----RCRFCCRRSESAGSNTAAVGT 180
+A AP AG G T P C CCRR + S T A
Sbjct: 173 WSARGAPLCSYRTSCAGSCGARTA---PTPAPTCASPSAAASSCCRRRRACSSPTTAWSG 229
Query: 181 VGPAGAGRRTPAEPCTLVPRSPAS 204
AG T A+P PRS A+
Sbjct: 230 ACGAGPTAATAAQPGK--PRSAAA 251
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 40.8 bits (94), Expect = 9e-04
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 15 LPPSPLPLPPQP---------PLQPEHPGAATAAAAAAATA----TSAASTASTSPPRTP 61
LPP P LPP P P P P + + + + A S AST+S SP
Sbjct: 15 LPPPP-DLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP---- 69
Query: 62 RHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHH-LLGQPRRALGLAVRA 120
P R R+ PP P L L RT ++ L G A GL R
Sbjct: 70 --PPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARR 127
Query: 121 ERKASSKPLPGRRAVAAAPPAGGGGE 146
R+ + G R VA P A G G+
Sbjct: 128 ARRLHLRGQIGVRRVAGTPEARGRGD 153
Score = 27.3 bits (59), Expect = 10.0
Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 27/109 (24%)
Query: 41 AAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLP-QPFPSVTYPLLAALARTFSNT 99
A A+ A +A S PP P P R R + PP P +P PS +
Sbjct: 2 AGASAARAAPSPILPPPPDLPPTPTR-RAPLIGCPPSPARPAPSAS-------------- 46
Query: 100 PASLHHLLGQPRRALGLAV---RAERKASSKPLPGRRAVAAAPPAGGGG 145
P RA G + A + S P RR A PP+ G G
Sbjct: 47 --------PSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSG 87
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 40.8 bits (94), Expect = 9e-04
Identities = 44/146 (30%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 15 LPPSPLPLPPQP---------PLQPEHPGAATAAAAAAATA----TSAASTASTSPPRTP 61
LPP P LPP P P P P + + + + A S AST+S SP
Sbjct: 15 LPPPP-DLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSP---- 69
Query: 62 RHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLHH-LLGQPRRALGLAVRA 120
P R R+ PP P L L RT ++ L G A GL R
Sbjct: 70 --PPRARRTEPAVPPSCGSGPGAAGALRMGLGRTQRAARVAVSRALAGTVAAAAGLGARR 127
Query: 121 ERKASSKPLPGRRAVAAAPPAGGGGE 146
R+ + G R VA P A G G+
Sbjct: 128 ARRLHLRGQIGVRRVAGTPEARGRGD 153
Score = 27.3 bits (59), Expect = 10.0
Identities = 31/109 (28%), Positives = 39/109 (35%), Gaps = 27/109 (24%)
Query: 41 AAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLP-QPFPSVTYPLLAALARTFSNT 99
A A+ A +A S PP P P R R + PP P +P PS +
Sbjct: 2 AGASAARAAPSPILPPPPDLPPTPTR-RAPLIGCPPSPARPAPSAS-------------- 46
Query: 100 PASLHHLLGQPRRALGLAV---RAERKASSKPLPGRRAVAAAPPAGGGG 145
P RA G + A + S P RR A PP+ G G
Sbjct: 47 --------PSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSG 87
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 40.8 bits (94), Expect = 9e-04
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 15 LPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLA 74
+PP+ + PP PP P PG+A A A A S ++ PP Q +A
Sbjct: 703 VPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQ---VA 759
Query: 75 PPLPQPFPSVTYPL 88
PP P P P + PL
Sbjct: 760 PPTPPPPPPIPAPL 773
Score = 37.7 bits (86), Expect = 0.007
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 16 PPSPLPLPPQPPLQP-EHPGAATAAAAAAATATSAASTASTSP-PRTPRHPGRERQCCLL 73
PP P PLPPQ P +P A T+ A T AA T P P + P
Sbjct: 767 PPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP 826
Query: 74 APPLPQ-PFPSVTYP 87
+PP P P P T P
Sbjct: 827 SPPTPPVPVPPPTLP 841
Score = 35.4 bits (80), Expect = 0.037
Identities = 49/217 (22%), Positives = 67/217 (30%), Gaps = 27/217 (12%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAAAAA---------TATSAASTASTSPPRTPRHPGR 66
PP P P PP PP P P + +A +AA T AS S + + P P
Sbjct: 633 PPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVM 692
Query: 67 ERQCCL---------LAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLA 117
+ Q + PP P P P T A + P+ P +
Sbjct: 693 QSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQV 752
Query: 118 VRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAA 177
+ A P P A PP P V + + A
Sbjct: 753 QHITQVAPPTPPPPPPIPAPLPPQAP---------PKPLVTIPAPTSTKTVAPVVTQAAP 803
Query: 178 VGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSPAL 214
P ++ PA P + +P SP + VP P L
Sbjct: 804 PTPTPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTL 840
Score = 34.3 bits (77), Expect = 0.081
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 7 QKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPR 62
+ +F PPSP+P PP PP P + + T + +S PP TP+
Sbjct: 922 ESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKT-SKTSSPGGKKPPPTPQ 976
Score = 30.4 bits (67), Expect = 1.2
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 5 KTQKKTLFQKLPPSPLPLPPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHP 64
KT + Q PP+P P P QP P A+ + PP P
Sbjct: 792 KTVAPVVTQAAPPTPTPPVPPAKKQPAFP-------ASYIPPSPPTPPVPVPPPTLP--- 841
Query: 65 GRERQCCLLAPPLP-QPFPSV 84
+++ C PP P P PSV
Sbjct: 842 -KQQSFCAKPPPSPLSPVPSV 861
Score = 28.1 bits (61), Expect = 5.8
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 19/100 (19%)
Query: 7 QKKTLFQKLPPSPL--------------PLPPQPPL---QPEHPGAATAA--AAAAATAT 47
++++ K PPSPL P PP PP QP P A A + A A
Sbjct: 842 KQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAK 901
Query: 48 SAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYP 87
+S P P + PP P P P+ P
Sbjct: 902 PKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPP 941
Score = 28.1 bits (61), Expect = 5.8
Identities = 33/150 (22%), Positives = 50/150 (33%), Gaps = 17/150 (11%)
Query: 16 PPSPLPLPPQPPL---QPEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCL 72
P S L PP PP P P TA+ + + T+ TS P + P ++
Sbjct: 921 PESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSS 980
Query: 73 LAPPLPQPFPSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGR 132
+ P P + +L F+ S G P + A K L G
Sbjct: 981 IKSSSGAEHPEPKRPSVDSLVSKFTPPAES-----GSPSKETLPPPAAPPKPGKLNLSGV 1035
Query: 133 R---------AVAAAPPAGGGGEETISRYP 153
A AP G G++++ +P
Sbjct: 1036 NLPGVLQQGCVSAKAPVLSGRGKDSVVEFP 1065
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 40.4 bits (93), Expect = 0.001
Identities = 58/234 (24%), Positives = 76/234 (32%), Gaps = 29/234 (12%)
Query: 3 INKTQKKTLFQKLPPSPLPLPPQP----------PLQPEHPGAATAAAAAAATATSAAST 52
+ T + L P P P P+ P PE P T AAA T A T
Sbjct: 490 LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT 549
Query: 53 ASTSP-PRTPRHPG--RERQCCLLAPP------LPQPFPSVTY-PLLAALARTFSNTPAS 102
P P TP+ P ++ P L +P P+ P LA T + P S
Sbjct: 550 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTS 609
Query: 103 LHHLLGQPRRALGLAVRAERKAS----SKPLPGRRAVAAAPPAGGGGEETISRYPILRVL 158
P G A ++ + +P P AP T + P + L
Sbjct: 610 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPKEL 668
Query: 159 CRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
+ S S+ A T P TP EP P+ PA T P P P
Sbjct: 669 APTT--TKGPTSTTSDKPAPTT--PKETAPTTPKEPAPTTPKKPAPTTPETPPP 718
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/203 (22%), Positives = 59/203 (29%), Gaps = 30/203 (14%)
Query: 16 PPSPLPLPPQPPLQ--PEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
P P P P+ P P+ P T T A T P TP+ P
Sbjct: 298 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT------ 351
Query: 74 APPLPQPF----PSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
AP P P P+ T P A T +P + P+ ++ + +P
Sbjct: 352 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTT-------PKEPAPTTTKSAPTTTKEPA 404
Query: 130 PGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRR 189
P A P T P E A + P
Sbjct: 405 PTTTKSAPTTPKEPSPTTTKEPAPTTP-----------KEPAPTTPKKPAPTTPKEPAPT 453
Query: 190 TPAEPCTLVPRSPASTCPLVPSP 212
TP EP + PA T P P+P
Sbjct: 454 TPKEPAPTTTKKPAPTTPKEPAP 476
Score = 31.6 bits (70), Expect = 0.53
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 176 AAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
A T GPA TP EP P+ PAST P P+P
Sbjct: 201 AETTTKGPA---LTTPKEPTPTTPKEPASTTPKEPTP 234
Score = 28.5 bits (62), Expect = 4.5
Identities = 34/168 (20%), Positives = 51/168 (30%), Gaps = 15/168 (8%)
Query: 45 TATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLH 104
+A A T+ TP+ + L P P P T P A TP ++
Sbjct: 183 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP----TTPKEPASTTPKEPTPTTIK 238
Query: 105 HLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFC 164
P+ ++ +P P AP T ++ P
Sbjct: 239 SAPTTPKEPAPTTTKSAPTTPKEPAP-TTTKEPAPTTPKEPAPTTTKEPAPTT------- 290
Query: 165 CRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
++SA + P TP EP P+ P T P P+P
Sbjct: 291 ---TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP 335
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 40.4 bits (93), Expect = 0.001
Identities = 58/234 (24%), Positives = 76/234 (32%), Gaps = 29/234 (12%)
Query: 3 INKTQKKTLFQKLPPSPLPLPPQP----------PLQPEHPGAATAAAAAAATATSAAST 52
+ T + L P P P P+ P PE P T AAA T A T
Sbjct: 531 LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT 590
Query: 53 ASTSP-PRTPRHPG--RERQCCLLAPP------LPQPFPSVTY-PLLAALARTFSNTPAS 102
P P TP+ P ++ P L +P P+ P LA T + P S
Sbjct: 591 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTS 650
Query: 103 LHHLLGQPRRALGLAVRAERKAS----SKPLPGRRAVAAAPPAGGGGEETISRYPILRVL 158
P G A ++ + +P P AP T + P + L
Sbjct: 651 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPKEL 709
Query: 159 CRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
+ S S+ A T P TP EP P+ PA T P P P
Sbjct: 710 APTT--TKGPTSTTSDKPAPTT--PKETAPTTPKEPAPTTPKKPAPTTPETPPP 759
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/203 (22%), Positives = 59/203 (29%), Gaps = 30/203 (14%)
Query: 16 PPSPLPLPPQPPLQ--PEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
P P P P+ P P+ P T T A T P TP+ P
Sbjct: 339 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT------ 392
Query: 74 APPLPQPF----PSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
AP P P P+ T P A T +P + P+ ++ + +P
Sbjct: 393 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTT-------PKEPAPTTTKSAPTTTKEPA 445
Query: 130 PGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRR 189
P A P T P E A + P
Sbjct: 446 PTTTKSAPTTPKEPSPTTTKEPAPTTP-----------KEPAPTTPKKPAPTTPKEPAPT 494
Query: 190 TPAEPCTLVPRSPASTCPLVPSP 212
TP EP + PA T P P+P
Sbjct: 495 TPKEPAPTTTKKPAPTTPKEPAP 517
Score = 31.6 bits (70), Expect = 0.53
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 176 AAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
A T GPA TP EP P+ PAST P P+P
Sbjct: 242 AETTTKGPA---LTTPKEPTPTTPKEPASTTPKEPTP 275
Score = 28.5 bits (62), Expect = 4.5
Identities = 34/168 (20%), Positives = 51/168 (30%), Gaps = 15/168 (8%)
Query: 45 TATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLH 104
+A A T+ TP+ + L P P P T P A TP ++
Sbjct: 224 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP----TTPKEPASTTPKEPTPTTIK 279
Query: 105 HLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFC 164
P+ ++ +P P AP T ++ P
Sbjct: 280 SAPTTPKEPAPTTTKSAPTTPKEPAP-TTTKEPAPTTPKEPAPTTTKEPAPTT------- 331
Query: 165 CRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
++SA + P TP EP P+ P T P P+P
Sbjct: 332 ---TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP 376
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 40.4 bits (93), Expect = 0.001
Identities = 58/234 (24%), Positives = 76/234 (32%), Gaps = 29/234 (12%)
Query: 3 INKTQKKTLFQKLPPSPLPLPPQP----------PLQPEHPGAATAAAAAAATATSAAST 52
+ T + L P P P P+ P PE P T AAA T A T
Sbjct: 583 LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT 642
Query: 53 ASTSP-PRTPRHPG--RERQCCLLAPP------LPQPFPSVTY-PLLAALARTFSNTPAS 102
P P TP+ P ++ P L +P P+ P LA T + P S
Sbjct: 643 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTS 702
Query: 103 LHHLLGQPRRALGLAVRAERKAS----SKPLPGRRAVAAAPPAGGGGEETISRYPILRVL 158
P G A ++ + +P P AP T + P + L
Sbjct: 703 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPKEL 761
Query: 159 CRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
+ S S+ A T P TP EP P+ PA T P P P
Sbjct: 762 APTT--TKGPTSTTSDKPAPTT--PKETAPTTPKEPAPTTPKKPAPTTPETPPP 811
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/203 (22%), Positives = 59/203 (29%), Gaps = 30/203 (14%)
Query: 16 PPSPLPLPPQPPLQ--PEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
P P P P+ P P+ P T T A T P TP+ P
Sbjct: 391 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT------ 444
Query: 74 APPLPQPF----PSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
AP P P P+ T P A T +P + P+ ++ + +P
Sbjct: 445 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTT-------PKEPAPTTTKSAPTTTKEPA 497
Query: 130 PGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRR 189
P A P T P E A + P
Sbjct: 498 PTTTKSAPTTPKEPSPTTTKEPAPTTP-----------KEPAPTTPKKPAPTTPKEPAPT 546
Query: 190 TPAEPCTLVPRSPASTCPLVPSP 212
TP EP + PA T P P+P
Sbjct: 547 TPKEPAPTTTKKPAPTTPKEPAP 569
Score = 31.6 bits (70), Expect = 0.53
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 176 AAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
A T GPA TP EP P+ PAST P P+P
Sbjct: 294 AETTTKGPA---LTTPKEPTPTTPKEPASTTPKEPTP 327
Score = 28.5 bits (62), Expect = 4.5
Identities = 34/168 (20%), Positives = 51/168 (30%), Gaps = 15/168 (8%)
Query: 45 TATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLH 104
+A A T+ TP+ + L P P P T P A TP ++
Sbjct: 276 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP----TTPKEPASTTPKEPTPTTIK 331
Query: 105 HLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFC 164
P+ ++ +P P AP T ++ P
Sbjct: 332 SAPTTPKEPAPTTTKSAPTTPKEPAP-TTTKEPAPTTPKEPAPTTTKEPAPTT------- 383
Query: 165 CRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
++SA + P TP EP P+ P T P P+P
Sbjct: 384 ---TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP 428
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 40.4 bits (93), Expect = 0.001
Identities = 58/234 (24%), Positives = 76/234 (32%), Gaps = 29/234 (12%)
Query: 3 INKTQKKTLFQKLPPSPLPLPPQP----------PLQPEHPGAATAAAAAAATATSAAST 52
+ T + L P P P P+ P PE P T AAA T A T
Sbjct: 624 LTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPT 683
Query: 53 ASTSP-PRTPRHPG--RERQCCLLAPP------LPQPFPSVTY-PLLAALARTFSNTPAS 102
P P TP+ P ++ P L +P P+ P LA T + P S
Sbjct: 684 TPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTS 743
Query: 103 LHHLLGQPRRALGLAVRAERKAS----SKPLPGRRAVAAAPPAGGGGEETISRYPILRVL 158
P G A ++ + +P P AP T + P + L
Sbjct: 744 TTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAP-TTPKGTAPTTLKEPAPTTPKKPAPKEL 802
Query: 159 CRCRFCCRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
+ S S+ A T P TP EP P+ PA T P P P
Sbjct: 803 APTT--TKGPTSTTSDKPAPTT--PKETAPTTPKEPAPTTPKKPAPTTPETPPP 852
Score = 40.0 bits (92), Expect = 0.001
Identities = 45/203 (22%), Positives = 59/203 (29%), Gaps = 30/203 (14%)
Query: 16 PPSPLPLPPQPPLQ--PEHPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLL 73
P P P P+ P P+ P T T A T P TP+ P
Sbjct: 432 PKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPT------ 485
Query: 74 APPLPQPF----PSVTYPLLAALARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPL 129
AP P P P+ T P A T +P + P+ ++ + +P
Sbjct: 486 APKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTT-------PKEPAPTTTKSAPTTTKEPA 538
Query: 130 PGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFCCRRSESAGSNTAAVGTVGPAGAGRR 189
P A P T P E A + P
Sbjct: 539 PTTTKSAPTTPKEPSPTTTKEPAPTTP-----------KEPAPTTPKKPAPTTPKEPAPT 587
Query: 190 TPAEPCTLVPRSPASTCPLVPSP 212
TP EP + PA T P P+P
Sbjct: 588 TPKEPAPTTTKKPAPTTPKEPAP 610
Score = 31.6 bits (70), Expect = 0.53
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 176 AAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
A T GPA TP EP P+ PAST P P+P
Sbjct: 335 AETTTKGPA---LTTPKEPTPTTPKEPASTTPKEPTP 368
Score = 28.5 bits (62), Expect = 4.5
Identities = 34/168 (20%), Positives = 51/168 (30%), Gaps = 15/168 (8%)
Query: 45 TATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAALARTFSNTPASLH 104
+A A T+ TP+ + L P P P T P A TP ++
Sbjct: 317 SAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTP----TTPKEPASTTPKEPTPTTIK 372
Query: 105 HLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISRYPILRVLCRCRFC 164
P+ ++ +P P AP T ++ P
Sbjct: 373 SAPTTPKEPAPTTTKSAPTTPKEPAP-TTTKEPAPTTPKEPAPTTTKEPAPTT------- 424
Query: 165 CRRSESAGSNTAAVGTVGPAGAGRRTPAEPCTLVPRSPASTCPLVPSP 212
++SA + P TP EP P+ P T P P+P
Sbjct: 425 ---TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAP 469
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 39.7 bits (91), Expect = 0.002
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Query: 17 PSPLPLPPQPPLQPEHPGAAT--AAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLA 74
P P P P PP Q ++P +T A ++++S++S++S+S + Q
Sbjct: 64 PPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPD 123
Query: 75 PPLPQPFPSVTYPLLAALART--FSNTPASLH-HLLGQPRR---ALGLAVRAERKA---S 125
PPLP F + PL A T + S H HL G +R A G V A +
Sbjct: 124 PPLPPAFGAPPPPLFDAAFPTPQWGIVDLSGHQHLFGNLKRGGPASGPGVTPGLGAPAGA 183
Query: 126 SKPLPGRRAVAAAPPAGGGGEET---ISRYPILRVLCRCRFCC 165
PLP PPA + T + L+ L RF C
Sbjct: 184 PGPLPAPSQTPPGPPAAAACDPTKDDKGYFRRLKYLMERRFPC 226
Score = 34.7 bits (78), Expect = 0.062
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 23 PPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHP 64
PPQP P P A AA+A +A ST S+ PP TP P
Sbjct: 284 PPQPG--PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAP 323
Score = 33.5 bits (75), Expect = 0.14
Identities = 35/121 (28%), Positives = 43/121 (35%), Gaps = 11/121 (9%)
Query: 32 HPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAA 91
H A AAAA A++A PP P P L PP P P AA
Sbjct: 459 HKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGP-------YLLPPDP-PTTDSEKAAAAA 510
Query: 92 LARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISR 151
A + P LLG LG A + S +PG+ G G ET+ R
Sbjct: 511 AAVVYGAVPVP---LLGAHPLLLGGAGTSGAGGSGASVPGKTFCCGICGRGFGRRETLKR 567
Query: 152 Y 152
+
Sbjct: 568 H 568
Score = 29.6 bits (65), Expect = 2.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAA 40
PP P LPP PP AA AAA
Sbjct: 488 PPGPYLLPPDPPTTDSEKAAAAAAA 512
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 39.7 bits (91), Expect = 0.002
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Query: 17 PSPLPLPPQPPLQPEHPGAAT--AAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLA 74
P P P P PP Q ++P +T A ++++S++S++S+S + Q
Sbjct: 64 PPPQPPPQPPPPQYDYPPQSTFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKPD 123
Query: 75 PPLPQPFPSVTYPLLAALART--FSNTPASLH-HLLGQPRR---ALGLAVRAERKA---S 125
PPLP F + PL A T + S H HL G +R A G V A +
Sbjct: 124 PPLPPAFGAPPPPLFDAAFPTPQWGIVDLSGHQHLFGNLKRGGPASGPGVTPGLGAPAGA 183
Query: 126 SKPLPGRRAVAAAPPAGGGGEET---ISRYPILRVLCRCRFCC 165
PLP PPA + T + L+ L RF C
Sbjct: 184 PGPLPAPSQTPPGPPAAAACDPTKDDKGYFRRLKYLMERRFPC 226
Score = 34.7 bits (78), Expect = 0.062
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 23 PPQPPLQPEHPGAATAAAAAAATATSAASTASTSPPRTPRHP 64
PPQP P P A AA+A +A ST S+ PP TP P
Sbjct: 284 PPQPG--PHLPPLGLPAPAASAATAAAPSTVSSGPPATPVAP 323
Score = 33.5 bits (75), Expect = 0.14
Identities = 35/121 (28%), Positives = 43/121 (35%), Gaps = 11/121 (9%)
Query: 32 HPGAATAAAAAAATATSAASTASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYPLLAA 91
H A AAAA A++A PP P P L PP P P AA
Sbjct: 459 HKAAHAPPAAAAEAPKDGAASAPQPPPTFPPGP-------YLLPPDP-PTTDSEKAAAAA 510
Query: 92 LARTFSNTPASLHHLLGQPRRALGLAVRAERKASSKPLPGRRAVAAAPPAGGGGEETISR 151
A + P LLG LG A + S +PG+ G G ET+ R
Sbjct: 511 AAVVYGAVPVP---LLGAHPLLLGGAGTSGAGGSGASVPGKTFCCGICGRGFGRRETLKR 567
Query: 152 Y 152
+
Sbjct: 568 H 568
Score = 29.6 bits (65), Expect = 2.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAA 40
PP P LPP PP AA AAA
Sbjct: 488 PPGPYLLPPDPPTTDSEKAAAAAAA 512
>gi|4503519 eukaryotic translation initiation factor 3, subunit 5
epsilon, 47kDa [Homo sapiens]
Length = 357
Score = 39.7 bits (91), Expect = 0.002
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 16 PPSPLPLPPQPPLQPEHPGAATAAAA--AAATATS----AASTASTSPPRTP---RHPGR 66
P +P P+P P P A AAA AAA A+S AA+ A+ +P +TP + P +
Sbjct: 12 PATPTPVPAAAPASVPAPTPAPAAAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQ 71
Query: 67 ERQCCLLAPPLPQPFP 82
L P LP PFP
Sbjct: 72 TPAPALPGPALPGPFP 87
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 12/97 (12%)
Query: 2 VINKTQKKTLFQKL----PPSPLPL-------PPQPPLQPEHPGAATAAAAAAATATSAA 50
++ +Q + L Q+ PP P PL PP PP P P A A
Sbjct: 405 ILKVSQPRALEQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLP 464
Query: 51 STASTSPPRTPRHPGRERQCCLLAPPLPQPFPSVTYP 87
+ +PP P P C L PP P P P + P
Sbjct: 465 GLGAMAPPAPPLPPPLPGSCEFLPPP-PPPLPGLGCP 500
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,330,452
Number of Sequences: 37866
Number of extensions: 667846
Number of successful extensions: 16200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 818
Number of HSP's that attempted gapping in prelim test: 8899
Number of HSP's gapped (non-prelim): 5685
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.