Guide to the Human Genome
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Search of human proteins with 239741999

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
sapiens]
         (366 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]           759   0.0  
gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo ...   759   0.0  
gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo ...   757   0.0  
gi|20143935 relaxin 2 isoform 2 [Homo sapiens]                         33   0.31 
gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo ...    33   0.31 
gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo...    32   0.69 
gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo...    32   0.69 
gi|40353769 chordin-like 2 [Homo sapiens]                              32   1.2  
gi|31077092 neurogenin 2 [Homo sapiens]                                31   1.5  
gi|148277037 AP2 associated kinase 1 [Homo sapiens]                    31   2.0  
gi|55953063 SET domain containing 4 isoform c [Homo sapiens]           31   2.0  
gi|8393013 SET domain containing 4 isoform a [Homo sapiens]            31   2.0  
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]              30   2.6  
gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo ...    30   3.4  
gi|171906567 peripheral benzodiazepine receptor-associated prote...    30   3.4  
gi|171906559 peripheral benzodiazepine receptor-associated prote...    30   3.4  
gi|239754586 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239754580 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239749145 PREDICTED: hypothetical protein XP_002346924 [Homo ...    30   4.5  
gi|239743189 PREDICTED: hypothetical protein XP_002342800 [Homo ...    30   4.5  
gi|239743184 PREDICTED: hypothetical protein XP_002342799 [Homo ...    30   4.5  
gi|239508858 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|239508849 PREDICTED: hypothetical protein [Homo sapiens]            30   4.5  
gi|5902052 relaxin 1 preproprotein [Homo sapiens]                      29   5.8  
gi|72534692 5'-nucleotidase domain containing 3 [Homo sapiens]         29   5.8  
gi|148839335 dpy-19-like 1 [Homo sapiens]                              29   5.8  
gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yea...    29   7.6  
gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]             29   7.6  
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]              29   7.6  
gi|226530771 adenosine deaminase domain containing 1 (testis-spe...    29   7.6  

>gi|239748103 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 366

 Score =  759 bits (1959), Expect = 0.0
 Identities = 366/366 (100%), Positives = 366/366 (100%)

Query: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60
           MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD
Sbjct: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60

Query: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120
           SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK
Sbjct: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120

Query: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180
           ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH
Sbjct: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180

Query: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL 240
           LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL
Sbjct: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL 240

Query: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300
           TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD
Sbjct: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300

Query: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360
           AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA
Sbjct: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360

Query: 361 FLLGFA 366
           FLLGFA
Sbjct: 361 FLLGFA 366


>gi|239741999 PREDICTED: hypothetical protein XP_002342370 [Homo
           sapiens]
          Length = 366

 Score =  759 bits (1959), Expect = 0.0
 Identities = 366/366 (100%), Positives = 366/366 (100%)

Query: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60
           MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD
Sbjct: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60

Query: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120
           SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK
Sbjct: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120

Query: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180
           ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH
Sbjct: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180

Query: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL 240
           LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL
Sbjct: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL 240

Query: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300
           TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD
Sbjct: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300

Query: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360
           AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA
Sbjct: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360

Query: 361 FLLGFA 366
           FLLGFA
Sbjct: 361 FLLGFA 366


>gi|239753559 PREDICTED: hypothetical protein XP_002345696 [Homo
           sapiens]
          Length = 366

 Score =  757 bits (1955), Expect = 0.0
 Identities = 365/366 (99%), Positives = 365/366 (99%)

Query: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60
           MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD
Sbjct: 1   MRESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWD 60

Query: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120
           SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK
Sbjct: 61  SPPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPK 120

Query: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180
           ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH
Sbjct: 121 ELTPGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRH 180

Query: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLVGEGSTVALVGCWIVGHSALL 240
           LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDL GEGSTVALVGCWIVGHSALL
Sbjct: 181 LQEVCAHGVLFVVFVVEEASSHEDLVLLGNQADVVLGDLAGEGSTVALVGCWIVGHSALL 240

Query: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300
           TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD
Sbjct: 241 TDHEDEILQEHAEAQGVIEDPRKDTFGLLILLCFGFACALISLLGPGSILPLLFLPQRGD 300

Query: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360
           AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA
Sbjct: 301 AALVCILHHLHLAQQLGLGTHERVALHAAFQKGARQQAAAHALEDGCGGGAKGAPLCTPA 360

Query: 361 FLLGFA 366
           FLLGFA
Sbjct: 361 FLLGFA 366


>gi|20143935 relaxin 2 isoform 2 [Homo sapiens]
          Length = 117

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 64  DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKEL 122
           +VI+LCG +L R ++  CG +T       Q D  +T +P  GD     +  I   G K L
Sbjct: 30  EVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRPVAGDFIQTVSLGISPDGGKAL 89

Query: 123 TPG 125
             G
Sbjct: 90  RTG 92


>gi|4506509 regulator of G-protein signalling 12 isoform 2 [Homo
            sapiens]
          Length = 1376

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)

Query: 2    RESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWDS 61
            RES  + GE    ++ + S+ P     P  + SPP  P T   G+K      GP     S
Sbjct: 1251 RESASQPGEQWEPVQES-SDSPSTS--PGSASSPPGPPGTTPPGQKSPS---GPFCTPQS 1304

Query: 62   PPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKE 121
            P  + +    Q+ + + Q  +A  GI+       AE      GD S  ++  +      +
Sbjct: 1305 PVSLAQEGTAQIWKRQSQEVEA-GGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQ 1363

Query: 122  LTPGPASPVTA 132
              PGP+ P T+
Sbjct: 1364 EVPGPSRPGTS 1374


>gi|38327601 regulator of G-protein signalling 12 isoform 1 [Homo
            sapiens]
          Length = 1447

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 2    RESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWDS 61
            RES  + GE    ++ + S+ P     P  + SPP  P T   G+K      GP     S
Sbjct: 1251 RESASQPGEQWEPVQES-SDSPSTS--PGSASSPPGPPGTTPPGQKSPS---GPFCTPQS 1304

Query: 62   PPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKE 121
            P  + +    Q+ + + Q  +A  GI+       AE      GD S  ++  +      +
Sbjct: 1305 PVSLAQEGTAQIWKRQSQEVEA-GGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQ 1363

Query: 122  LTPGPASP 129
              PGP+ P
Sbjct: 1364 EVPGPSRP 1371


>gi|38327599 regulator of G-protein signalling 12 isoform 3 [Homo
           sapiens]
          Length = 799

 Score = 32.3 bits (72), Expect = 0.69
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 2   RESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWDS 61
           RES  + GE    ++ + S+ P     P  + SPP  P T   G+K      GP     S
Sbjct: 603 RESASQPGEQWEPVQES-SDSPSTS--PGSASSPPGPPGTTPPGQKSPS---GPFCTPQS 656

Query: 62  PPDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKE 121
           P  + +    Q+ + + Q  +A  GI+       AE      GD S  ++  +      +
Sbjct: 657 PVSLAQEGTAQIWKRQSQEVEA-GGIQTVEDEHVAELTLMGEGDISSPNSTLLPPPSTPQ 715

Query: 122 LTPGPASP 129
             PGP+ P
Sbjct: 716 EVPGPSRP 723


>gi|40353769 chordin-like 2 [Homo sapiens]
          Length = 451

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 146 HCVAIHHTQAPSGPQD-CPQCLEPSISWRL---PRLVRHLQEVCAHGVLF 191
           HC  +H  Q  + PQ  CP+C+EP     L   P+  +H   +  HG +F
Sbjct: 75  HCPPVHCPQPVTEPQQCCPKCVEPHTPSGLRAPPKSCQHNGTMYQHGEIF 124


>gi|31077092 neurogenin 2 [Homo sapiens]
          Length = 272

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 333 GARQQAAAHALEDGCGGGAKGAPLCTPAFLLG 364
           GAR+Q  A A +   GG A GA  C PA LLG
Sbjct: 50  GARRQRGAEAGQGARGGVAAGAEGCRPARLLG 81


>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
          Length = 961

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 8/45 (17%)

Query: 13  PAIESNGSERPGLQLFPSP--------SGSPPSRPSTRKAGEKKI 49
           PAI++   ++P +Q  P P        S +PPS P T++AG ++I
Sbjct: 591 PAIQAPVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRI 635


>gi|55953063 SET domain containing 4 isoform c [Homo sapiens]
          Length = 307

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 126 PASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVR------ 179
           P SP+ A     V + H G   +   + +       CP CLEP +   LP+ ++      
Sbjct: 103 PPSPLLALCTFLVSEKHAGHRSLWKPYLEILPKAYTCPVCLEPEVVNLLPKSLKAKAEEQ 162

Query: 180 --HLQEVCA 186
             H+QE  A
Sbjct: 163 RAHVQEFFA 171


>gi|8393013 SET domain containing 4 isoform a [Homo sapiens]
          Length = 440

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 126 PASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVR------ 179
           P SP+ A     V + H G   +   + +       CP CLEP +   LP+ ++      
Sbjct: 103 PPSPLLALCTFLVSEKHAGHRSLWKPYLEILPKAYTCPVCLEPEVVNLLPKSLKAKAEEQ 162

Query: 180 --HLQEVCA 186
             H+QE  A
Sbjct: 163 RAHVQEFFA 171


>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
          Length = 739

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 20/116 (17%)

Query: 24  GLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWDSPPDVIELCGNQLSRLRLQCGKA 83
           G  L     G+PP +PS + A E K  L+  P                Q   +RL+  +A
Sbjct: 357 GPLLLTGGGGAPPPQPSPQGASETKTSLVLDP----------------QTGEVRLE--EA 398

Query: 84  TNGIEGTHQADQAETGQPCVGDPSCHDNAAIMDSGPKELT-PGPASPVTAFAANYV 138
            +    T  A  A  G P +G+      A ++   P   T P P  PV A AA  V
Sbjct: 399 QSEAPETKGAQVAAPG-PALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQV 453


>gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
           sapiens]
          Length = 220

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 35/135 (25%), Positives = 47/135 (34%), Gaps = 17/135 (12%)

Query: 3   ESGDKDGELGPAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCFWWDSP 62
           E  + DG L   +  + +  P     P+P+G PP  PS                 W+ +P
Sbjct: 28  EEDEVDGWLIIDLPDSYAAPPSPGAAPAPAGRPPPAPSLMDES------------WFVTP 75

Query: 63  PDVIELCGNQLSRLRLQCGKATNGIEGTHQADQAETGQPCV---GDPSCHDNAAIMDS-- 117
           P      G  L   RLQ     + +          TG   V   G PS   +AA+ D   
Sbjct: 76  PACFTAEGPGLGPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDL 135

Query: 118 GPKELTPGPASPVTA 132
              ELTP    P  A
Sbjct: 136 SEGELTPARREPRAA 150


>gi|171906567 peripheral benzodiazepine receptor-associated protein
           1 isoform b [Homo sapiens]
          Length = 1797

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 13  PAIESNGSERPGLQLFPSPSG--SPPSRPSTRKAGEKKIRLLFGPCFWWDSPPDVIELCG 70
           P  E  G E   L L PSP G   PP+ P  R+    K +L       W+ PP+ +EL G
Sbjct: 707 PEEEDAGDE---LSLSPSPEGLGEPPAVPYPRRLVVLK-QLAHSVVLAWEPPPEQVELHG 762


>gi|171906559 peripheral benzodiazepine receptor-associated protein
           1 isoform a [Homo sapiens]
          Length = 1857

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 13  PAIESNGSERPGLQLFPSPSG--SPPSRPSTRKAGEKKIRLLFGPCFWWDSPPDVIELCG 70
           P  E  G E   L L PSP G   PP+ P  R+    K +L       W+ PP+ +EL G
Sbjct: 767 PEEEDAGDE---LSLSPSPEGLGEPPAVPYPRRLVVLK-QLAHSVVLAWEPPPEQVELHG 822


>gi|239754586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239754580 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239749145 PREDICTED: hypothetical protein XP_002346924 [Homo
           sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239743189 PREDICTED: hypothetical protein XP_002342800 [Homo
           sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239743184 PREDICTED: hypothetical protein XP_002342799 [Homo
           sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239508858 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|239508849 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 193

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/40 (40%), Positives = 20/40 (50%)

Query: 18  NGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           NGSE P  Q     +G  PS P+ +   E+K    F PCF
Sbjct: 111 NGSEDPSDQRVHGLAGVVPSVPAVQGGQEEKQTAWFQPCF 150


>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
          Length = 185

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 64  DVIELCGNQLSRLRLQ-CGKATNGIEGTHQADQAETGQP 101
           DVI+LCG +L R ++  CG +T       Q D  +T +P
Sbjct: 30  DVIKLCGRELVRAQIAICGMSTWSKRSLSQEDAPQTPRP 68


>gi|72534692 5'-nucleotidase domain containing 3 [Homo sapiens]
          Length = 548

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 324 VALHAAFQKGARQQAA-AHALEDGCGGGAKGAPLCTPA 360
           +A  A   +GA  +AA A AL  GCG  A+G P   PA
Sbjct: 3   MAAAAVVARGAGARAATAAALRGGCGTAARGRPCAGPA 40


>gi|148839335 dpy-19-like 1 [Homo sapiens]
          Length = 675

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 29 PSPSGSPPSRPSTRKAGEKKIRLLFGPCFWW 59
          P P G PP RP T +A   + R +F     W
Sbjct: 5  PPPEGRPPPRPRTGRAPRGRRRAVFAAVLHW 35


>gi|115430252 serine threonine kinase 39 (STE20/SPS1 homolog, yeast)
           [Homo sapiens]
          Length = 545

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 124 PGPASPVTAFAANYVDKVHVGEHCVAIHHTQAPSGPQDCPQCLEPSISWRLPRLVRHLQE 183
           P  A+PVTA AA             A     AP+ P   P     ++ W + R    LQE
Sbjct: 14  PQQAAPVTAAAAA------APAAATAAPAPAAPAAPAPAPAPAAQAVGWPICRDAYELQE 67

Query: 184 VCAHGVLFVV 193
           V   G   VV
Sbjct: 68  VIGSGATAVV 77


>gi|122056617 LIM domain binding 3 isoform 3 [Homo sapiens]
          Length = 330

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 13  PAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           PA+++NGS         +PS SP +R S    G  ++R  F P F
Sbjct: 109 PALDTNGS-------LVAPSPSPEARASPGTPGTPELRPTFSPAF 146


>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
          Length = 727

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 13  PAIESNGSERPGLQLFPSPSGSPPSRPSTRKAGEKKIRLLFGPCF 57
           PA+++NGS         +PS SP +R S    G  ++R  F P F
Sbjct: 109 PALDTNGS-------LVAPSPSPEARASPGTPGTPELRPTFSPAF 146


>gi|226530771 adenosine deaminase domain containing 1
           (testis-specific) isoform 3 [Homo sapiens]
          Length = 558

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 18/88 (20%)

Query: 117 SGPKELTPGPASPVTAFAANYVDKVHV-GEHCVAIHHTQAPSGPQDCPQCLEPSISWRLP 175
           SGP    P PA PV      YV KVH  G H   I + +           +   +  R  
Sbjct: 158 SGPP---PFPAEPVVLSELAYVSKVHYEGRH---IQYAK-----------ISQIVKERFN 200

Query: 176 RLVRHLQEVCAHGVLFVVFVVEEASSHE 203
           +L+ +  E   +      F++E A  HE
Sbjct: 201 QLISNRSEYLKYSSSLAAFIIERAGQHE 228


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,408,374
Number of Sequences: 37866
Number of extensions: 926464
Number of successful extensions: 2985
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2955
Number of HSP's gapped (non-prelim): 49
length of query: 366
length of database: 18,247,518
effective HSP length: 104
effective length of query: 262
effective length of database: 14,309,454
effective search space: 3749076948
effective search space used: 3749076948
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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