Guide to the Human Genome
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Name: NT5DC3 Sequence: fasta or formatted (548aa) NCBI GI: 72534692
Description:

5'-nucleotidase domain containing 3

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         42           4
 C cysteine            1.1          6           1
 D aspartate           5.7         31           1
 E glutamate           6.4         35           2
 F phenylalanine       4.7         26           2
 G glycine             5.5         30           2
 H histidine           2.9         16           1
 I isoleucine          5.5         30           2
 K lysine              6.0         33           2
 L leucine             9.9         54           2
 M methionine          3.8         21           1
 N asparagine          3.6         20           2
 P proline             4.4         24           2
 Q glutamine           3.8         21           1
 R arginine            6.8         37           2
 S serine              5.5         30           2
 T threonine           5.1         28           1
 V valine              4.7         26           2
 W tryptophan          1.5          8           1
 Y tyrosine            5.5         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   5'-nucleotidase domain containing 3 
NT5DC2                0.612   5'-nucleotidase domain containing 2 isoform 1 [Homo...
NT5DC2                0.583   5'-nucleotidase domain containing 2 isoform 2 
NT5C2                 0.143   5'-nucleotidase, cytosolic II 
NT5C2                 0.143   5'-nucleotidase, cytosolic II 
NT5DC4                0.119   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC4                0.119   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC4                0.118   PREDICTED: 5'-nucleotidase domain containing 4 [Hom...
NT5DC1                0.084   5'-nucleotidase, cytosolic II-like 1 protein 
HECA                  0.009   headcase 
NARS                  0.008   asparaginyl-tRNA synthetase 
FOXQ1                 0.006   forkhead box Q1 
REPS2                 0.006   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.006   RALBP1 associated Eps domain containing 2 isoform 1...
LOC100292653          0.005   PREDICTED: similar to hCG1998564 
JUND                  0.005   jun D proto-oncogene 
SPTLC3                0.005   serine palmitoyltransferase, long chain base subuni...
GTPBP8                0.005   GTP-binding protein 8 isoform 2 
GTPBP8                0.005   GTP-binding protein 8 isoform 1 
LOC728650             0.005   PREDICTED: hypothetical protein 
LOC100293294          0.005   PREDICTED: hypothetical protein 
LOC728650             0.005   PREDICTED: hypothetical protein 
LOC100289745          0.005   PREDICTED: hypothetical protein XP_002347086 
LOC100288749          0.005   PREDICTED: hypothetical protein XP_002342931 
TCHP                  0.005   trichoplein 
TCHP                  0.005   trichoplein 
ARX                   0.005   aristaless related homeobox 
SLC27A3               0.005   solute carrier family 27 member 3 
LOC339192             0.004   PREDICTED: hypothetical protein 
LOC100291808          0.004   PREDICTED: hypothetical protein XP_002345696 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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