Guide to the Human Genome
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Name: DPY19L1 Sequence: fasta or formatted (675aa) NCBI GI: 148839335
Description:

dpy-19-like 1

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         44           2
 C cysteine            2.4         16           1
 D aspartate           2.5         17           2
 E glutamate           4.9         33           2
 F phenylalanine       6.2         42           3
 G glycine             5.3         36           2
 H histidine           2.8         19           1
 I isoleucine          7.4         50           2
 K lysine              5.2         35           1
 L leucine            12.4         84           3
 M methionine          3.7         25           2
 N asparagine          2.8         19           1
 P proline             4.7         32           3
 Q glutamine           2.4         16           2
 R arginine            4.9         33           3
 S serine              6.1         41           2
 T threonine           5.5         37           2
 V valine              7.6         51           2
 W tryptophan          2.2         15           1
 Y tyrosine            4.4         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dpy-19-like 1 
DPY19L2               0.677   dpy-19-like 2 
DPY19L3               0.184   dpy-19-like 3 
DPY19L4               0.139   dpy-19-like 4 
HIVEP2                0.007   human immunodeficiency virus type I enhancer bindin...
LASS3                 0.005   LAG1 longevity assurance homolog 3 
ND4                   0.005   NADH dehydrogenase subunit 4 
ND4                   0.005   NADH dehydrogenase subunit 4 
TM9SF2                0.005   transmembrane 9 superfamily member 2 
CUL1                  0.004   cullin 1 
EPHB3                 0.004   ephrin receptor EphB3 precursor 
CPSF6                 0.004   cleavage and polyadenylation specific factor 6, 68 ...
CAP1                  0.004   adenylyl cyclase-associated protein 
CAP1                  0.004   adenylyl cyclase-associated protein 
OR5D13                0.004   olfactory receptor, family 5, subfamily D, member 13...
LOC728351             0.004   PREDICTED: hypothetical protein 
LOC728351             0.004   PREDICTED: hypothetical protein 
CHRNB4                0.004   cholinergic receptor, nicotinic, beta 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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