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Search of human proteins with 239741997
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo
sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo ... 560 e-160
gi|239753561 PREDICTED: hypothetical protein XP_002345697 [Homo ... 526 e-149
gi|239748101 PREDICTED: hypothetical protein [Homo sapiens] 526 e-149
gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo ... 37 0.018
gi|188536004 zinc finger protein 469 [Homo sapiens] 36 0.040
gi|92859678 small nuclear RNA activating complex, polypeptide 4,... 36 0.040
gi|150170699 kinesin family member 26A [Homo sapiens] 34 0.15
gi|66529407 tensin [Homo sapiens] 33 0.20
gi|33286444 mastermind-like 2 [Homo sapiens] 33 0.26
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|239755454 PREDICTED: hypothetical protein [Homo sapiens] 33 0.26
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens] 33 0.26
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 33 0.34
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 33 0.34
gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo ... 32 0.45
gi|222831614 hypothetical protein LOC388963 [Homo sapiens] 32 0.58
gi|239757240 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239757158 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239756662 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 32 0.76
gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo ... 32 0.76
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 32 0.76
gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo ... 32 0.76
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 32 0.76
gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 0.76
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 32 0.76
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 31 0.99
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 31 0.99
>gi|239741997 PREDICTED: hypothetical protein XP_002342369 [Homo
sapiens]
Length = 268
Score = 560 bits (1442), Expect = e-160
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF 120
SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF 120
Query: 121 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 180
WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR
Sbjct: 121 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 180
Query: 181 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 240
GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS
Sbjct: 181 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 240
Query: 241 ALPRLHNTPLALSVHRGRPAWDLEITRP 268
ALPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 241 ALPRLHNTPLALSVHRGRPAWDLEITRP 268
>gi|239753561 PREDICTED: hypothetical protein XP_002345697 [Homo
sapiens]
Length = 267
Score = 526 bits (1354), Expect = e-149
Identities = 256/268 (95%), Positives = 257/268 (95%), Gaps = 1/268 (0%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF 120
SPADEPRDLPFGLGRSWLGVSNRSSPAAEP R + SRIKSPRSSPGFRGPVF
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSR-GLHFLLSRIKSPRSSPGFRGPVF 119
Query: 121 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 180
WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR
Sbjct: 120 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 179
Query: 181 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 240
GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS
Sbjct: 180 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 239
Query: 241 ALPRLHNTPLALSVHRGRPAWDLEITRP 268
ALPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 240 ALPRLHNTPLALSVHRGRPAWDLEITRP 267
>gi|239748101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 267
Score = 526 bits (1354), Expect = e-149
Identities = 256/268 (95%), Positives = 257/268 (95%), Gaps = 1/268 (0%)
Query: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG
Sbjct: 1 MKGSKAALPTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG 60
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVF 120
SPADEPRDLPFGLGRSWLGVSNRSSPAAEP R + SRIKSPRSSPGFRGPVF
Sbjct: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPRERRSR-GLHFLLSRIKSPRSSPGFRGPVF 119
Query: 121 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 180
WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR
Sbjct: 120 WVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPAR 179
Query: 181 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 240
GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS
Sbjct: 180 GYSPGSGAGRPGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTANPISQTANRGARKSS 239
Query: 241 ALPRLHNTPLALSVHRGRPAWDLEITRP 268
ALPRLHNTPLALSVHRGRPAWDLEITRP
Sbjct: 240 ALPRLHNTPLALSVHRGRPAWDLEITRP 267
>gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
sapiens]
Length = 313
Score = 37.0 bits (84), Expect = 0.018
Identities = 50/199 (25%), Positives = 71/199 (35%), Gaps = 51/199 (25%)
Query: 85 SPAAEPSAAP------------LRIPEQYSP-SRIKSPRSSPGFRGPVFWVSERALATAG 131
SPAA P AAP L P + P R +P +P P F S +L ++G
Sbjct: 117 SPAARPGAAPSPPERWADFAVNLNFPSRLQPCRRTSAPLLAPQVARPAFPKSPGSLRSSG 176
Query: 132 SWCPGPLLTQLTFQNS--------------AAQPGGEDLTPSQSPVRWREGRHRGCRAPF 177
S L LT+ + A G S P + +G R P
Sbjct: 177 S------LATLTYPSQHRRYLNRRPATCLRPAGSSGSGWAVSGEPKAQAQLGLKGTRLPL 230
Query: 178 PARGYSP---------GSGAGR--PGAPQCALVVYTLKPFEFESACWCLSSPRPCKGTAN 226
P G+ P G+ GR P P +L + +P + A + RPC+
Sbjct: 231 PHNGFGPRAEKRIMEDGAQRGRENPSLPSASLSKH--QPLTLQFADFPGHLNRPCQ---- 284
Query: 227 PISQTANRGARKSSALPRL 245
+ + + RK A PRL
Sbjct: 285 -VKEAGDTPPRKPGATPRL 302
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 35.8 bits (81), Expect = 0.040
Identities = 53/199 (26%), Positives = 73/199 (36%), Gaps = 33/199 (16%)
Query: 9 PTQTSLLDPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLG-SPADEPR 67
P+Q L D P T++ R GG+ Q +E +A D L+ + G +P+ P
Sbjct: 30 PSQPPLEDNTPATRTTKGA-REAGGQAQAMELPEAQPRQARDGELKPPSLRGQAPSSTP- 87
Query: 68 DLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKS-PRSSPGFRGPVFWVSERA 126
R SP P +PL+ +PSR+ SP R + S R
Sbjct: 88 -------------GKRGSPQTPPGRSPLQ-----APSRLAGRAEGSPPQRYILGIASSRT 129
Query: 127 LATAGSWCPGPLL--TQLTFQNSAAQPG-GEDLTP-----SQSPVRWREGRHRGCRAP-- 176
T P L QL ++ PG G L P P G HR + P
Sbjct: 130 KPTLDETPENPQLEAAQLPEVDTPQGPGTGAPLRPGLPRTEAQPAAEELGFHRCFQEPPS 189
Query: 177 -FPARGYSPGSGAGRPGAP 194
F + Y+ S RP AP
Sbjct: 190 SFTSTNYTSPSATPRPPAP 208
Score = 30.8 bits (68), Expect = 1.3
Identities = 41/154 (26%), Positives = 50/154 (32%), Gaps = 43/154 (27%)
Query: 59 LGSPADEPRDLPF----GLGRSWLGVSNRSSPA----AEPSAAPLRIPEQYSPSRIKSPR 110
LGS P LP G GV P A P P R+P+ + P+ P
Sbjct: 391 LGSTRGPPSSLPQRHFPGQAYRASGVDTSPGPPDTELAAPGPPPARLPQLWDPTAAPYP- 449
Query: 111 SSPGFRGPVFWVSERALATAGSWCPGPL-LTQLTFQNSAAQPGGEDLTPSQSPVRWRE-- 167
+ PG GPL T+ F N PG P +P+ W +
Sbjct: 450 TPPG---------------------GPLAATRSMFFNGQPSPGQRLCLPQSAPLPWPQVL 488
Query: 168 --------GRHRGCRAPFPARGYSPGSGAGRPGA 193
G R PFPA G P G GA
Sbjct: 489 PTARPSPHGMEMLSRLPFPAGG--PEWQGGSQGA 520
>gi|92859678 small nuclear RNA activating complex, polypeptide 4,
190kDa [Homo sapiens]
Length = 1469
Score = 35.8 bits (81), Expect = 0.040
Identities = 36/134 (26%), Positives = 51/134 (38%), Gaps = 16/134 (11%)
Query: 72 GLGRSWLGVSNRSS---------PAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWV 122
GLG+S ++R PAA PS PL + + S + I P + PV WV
Sbjct: 1022 GLGQSQAPAASRKQGLPEAPPFLPAA-PSPTPLPV-QPLSLTHIGGPHVATSVPLPVTWV 1079
Query: 123 SERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRAPFPARGY 182
TA P P+ ++ A PG L + P +G RAP + +
Sbjct: 1080 -----LTAQGLLPVPVPAVVSLPRPAGTPGPAGLLATLLPPLTETRAAQGPRAPALSSSW 1134
Query: 183 SPGSGAGRPGAPQC 196
P + R P C
Sbjct: 1135 QPPANMNREPEPSC 1148
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 33.9 bits (76), Expect = 0.15
Identities = 37/160 (23%), Positives = 56/160 (35%), Gaps = 12/160 (7%)
Query: 16 DPEPLFLTSRNVFRALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGR 75
+P P +V RA + K A + L+R+ L + + R+ P GR
Sbjct: 1401 EPRPSSRADHSVPRATSSLKARASKVEAAHRLAGHASLERYEGLAHSSSKGREAP---GR 1457
Query: 76 SWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAGSWCP 135
V P + P+ P + + +P+ PV R L GS
Sbjct: 1458 PPRAVPKLGVPPSSPTHGPAPACRSGAAKAVGAPKP------PVGGGKGRGLVAGGSRAL 1511
Query: 136 GPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCRA 175
GP + T + PGG P +P R G G +A
Sbjct: 1512 GPSVKLSTASVTGRSPGGPVAGPRAAP---RAGPSVGAKA 1548
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 33.5 bits (75), Expect = 0.20
Identities = 61/204 (29%), Positives = 81/204 (39%), Gaps = 28/204 (13%)
Query: 61 SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIP-------EQYSPSRIKSPRSSP 113
+P +EP +L + GV R AEP APLR E SP SPR SP
Sbjct: 860 TPEEEPLNLEGLVAHRVAGVQAREKQPAEP-PAPLRRRAASDGQYENQSP-EATSPR-SP 916
Query: 114 GFRGPVFWVS-ERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRG 172
G R PV VS E AL A + P L A + E +PS P G
Sbjct: 917 GVRSPVQCVSPELALTIALNPGGRPKEPHLHSYKEAFEE-MEGTSPSSPP-------PSG 968
Query: 173 CRAPFPARGYSPGSGAG-RPGAPQCALVVYT------LKPFEFESACWCLSSPRPCKGTA 225
R+P P +P S G +P P L+ T ++P E E S P +
Sbjct: 969 VRSP-PGLAKTPLSALGLKPHNPADILLHPTGVTRRRIQPEEDEGKVVVRLSEEP-RSYV 1026
Query: 226 NPISQTANRGARKSSALPRLHNTP 249
+++TA G R + P+ + P
Sbjct: 1027 ESVARTAVAGPRAQDSEPKSFSAP 1050
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 33.1 bits (74), Expect = 0.26
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 81 SNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFR----GPVFWVSERALATAGSWCPG 136
S RS+P + I +YSP + P SP R GP F ++ AL+T+ P
Sbjct: 348 SQRSTPRPSLPMEKIVIKSEYSPGLTQGPSGSPQLRPPSAGPAFSMANSALSTSS---PI 404
Query: 137 PLLTQLTFQNSAAQP----GGEDLTPSQSPVRWREGRH 170
P + Q S AQP G PS W+E H
Sbjct: 405 PSVPQ-----SQAQPQTGSGASRALPS-----WQEVSH 432
>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 33.1 bits (74), Expect = 0.26
Identities = 40/146 (27%), Positives = 49/146 (33%), Gaps = 39/146 (26%)
Query: 32 GGKTQKIEKHNGNGHKAEDSILQRHTTL-GSPADEPRDLPFGLGRSWLGVSNRSSPAAEP 90
GG H+G H+A +RH G P P P SW SNR PA
Sbjct: 15 GGPASARRAHSGRPHQA-----RRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAELS 69
Query: 91 SAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQ 150
P P + I++ A+A W P + Q T
Sbjct: 70 VQLPANPPPGLNQGCIRA-------------------ASAPRWVPTLTVPQATL------ 104
Query: 151 PGGEDLTPSQSPVRWR---EGRHRGC 173
PGG SQ R R EG+ RGC
Sbjct: 105 PGG-----SQGHRRCRGEGEGQRRGC 125
>gi|239755454 PREDICTED: hypothetical protein [Homo sapiens]
Length = 305
Score = 33.1 bits (74), Expect = 0.26
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 19/122 (15%)
Query: 53 LQRHTTLGSPADEPR-DLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQ----YSPSRIK 107
L+R ++ SP + +P+ G W + R S A+ +P + + P +
Sbjct: 168 LERRASVASPGQKGECGVPWREGGVWRPLERRGSVASPGEKGECGVPWREGRVWRPLERR 227
Query: 108 SPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWRE 167
+ +SPG +G W G + L + S A PG + + VRWRE
Sbjct: 228 ASVASPGQKGEC----------GVPWREGAVWRPLDRRGSVASPGEK----GECGVRWRE 273
Query: 168 GR 169
GR
Sbjct: 274 GR 275
>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
Length = 681
Score = 33.1 bits (74), Expect = 0.26
Identities = 29/90 (32%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 109 PRSSPGFRGPVFWVSERALATAGSWCPGPLLT------QLTFQNSAAQPGGEDLTPSQSP 162
P+ PG GP + A PGP ++T AQ G ED P S
Sbjct: 412 PQGPPG-SGPPTPSRDSARRAPRKGGPGPASARPSESKEMTGARLWAQDGSEDEPPKDSD 470
Query: 163 VRWREGRHRGCRAPFPARGYSPGSGAGRPG 192
E GCR P P G +P GAG G
Sbjct: 471 GEDPETAAVGCRGPTP--GQAPAGGAGAEG 498
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 32.7 bits (73), Expect = 0.34
Identities = 42/169 (24%), Positives = 53/169 (31%), Gaps = 42/169 (24%)
Query: 29 RALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAA 88
RA G T + E G H +D + G+ A EP R W R P
Sbjct: 337 RAGGTWTSRFEAQRGCAH--QDGQRRTRDGAGNHASEP-------ARVWSPPPRRQRPRR 387
Query: 89 EPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSA 148
P A+ P++ P S + P GP W
Sbjct: 388 LPRASLQEEPKRRPPCARPSG-AGPAREGPAAW--------------------------- 419
Query: 149 AQPGGEDLTPSQSPVRWREGRHRGCRAPF---PARGYSPGSGAGRPGAP 194
PGG P P R+ G RAP + G+ GS AGR P
Sbjct: 420 --PGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 32.7 bits (73), Expect = 0.34
Identities = 42/169 (24%), Positives = 53/169 (31%), Gaps = 42/169 (24%)
Query: 29 RALGGKTQKIEKHNGNGHKAEDSILQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPAA 88
RA G T + E G H +D + G+ A EP R W R P
Sbjct: 337 RAGGTWTSRFEAQRGCAH--QDGQRRTRDGAGNHASEP-------ARVWSPPPRRQRPRR 387
Query: 89 EPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSA 148
P A+ P++ P S + P GP W
Sbjct: 388 LPRASLQEEPKRRPPCARPSG-AGPAREGPAAW--------------------------- 419
Query: 149 AQPGGEDLTPSQSPVRWREGRHRGCRAPF---PARGYSPGSGAGRPGAP 194
PGG P P R+ G RAP + G+ GS AGR P
Sbjct: 420 --PGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDP 466
>gi|239744258 PREDICTED: hypothetical protein LOC100128703 [Homo
sapiens]
Length = 389
Score = 32.3 bits (72), Expect = 0.45
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 19/122 (15%)
Query: 53 LQRHTTLGSPADEPR-DLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQ----YSPSRIK 107
L+R ++ SP ++ +P+ G W + R+S A+ +P + P +
Sbjct: 252 LERRGSVASPGEKGECGVPWTEGGVWRPLERRASVASPGEKGECGVPWTEGGVWRPLERR 311
Query: 108 SPRSSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWRE 167
+ +SPG +G W G + L + S A PG + + VRWRE
Sbjct: 312 ASVASPGEKGEC----------GVPWREGGVWRPLDRRGSVASPGEK----GECGVRWRE 357
Query: 168 GR 169
GR
Sbjct: 358 GR 359
>gi|222831614 hypothetical protein LOC388963 [Homo sapiens]
Length = 588
Score = 32.0 bits (71), Expect = 0.58
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 73 LGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWV--SERALATA 130
LGRSW+G ++ + + LR+ P+ + PG GPV R L++A
Sbjct: 169 LGRSWMGRGSQEQMESWEPSPQLRVTSAPPPTSELFQEAGPG--GPVEEADGQSRGLSSA 226
Query: 131 GSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSP 162
GS +FQ S + +D PS P
Sbjct: 227 GS-------LSASFQLSVEEAPADDADPSLDP 251
>gi|239757240 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 31.6 bits (70), Expect = 0.76
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 218 PRPCKGTANPISQTANRGARKSSALPRLHNTPLALS 253
P C G+ +P+S + R K+ +LPR+ N LA+S
Sbjct: 14 PSSCSGSRSPLSGSRRRTWLKAKSLPRMANWSLAMS 49
>gi|239757158 PREDICTED: hypothetical protein [Homo sapiens]
Length = 150
Score = 31.6 bits (70), Expect = 0.76
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 24/98 (24%)
Query: 51 SILQRHTTLG---------SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQY 101
++LQ+H G SPA R L R+ L R +P
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAAL---------- 99
Query: 102 SPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLL 139
PSR+ SPR P R P VS R TA W PGP L
Sbjct: 100 -PSRLPSPRPRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|239756662 PREDICTED: hypothetical protein [Homo sapiens]
Length = 418
Score = 31.6 bits (70), Expect = 0.76
Identities = 28/99 (28%), Positives = 33/99 (33%), Gaps = 13/99 (13%)
Query: 171 RGCRAPFPARGYSPGSGAGRPGAPQCALVVYTLKPFE------FESACWCLSSPRPCKGT 224
RG +P A ++ G G APQC L + SP P GT
Sbjct: 2 RGGHSPAAAPAHTGGRRGGGAPAPQCVRSPAALSRRHQPGRLLLHVRTTSVCSPLPWTGT 61
Query: 225 ANPISQTANRGARKSSALPRLHNTPLALSVHRGRPAWDL 263
A G + LP L PL HRG W L
Sbjct: 62 AT-------EGQSVGTCLPGLFTRPLDRHRHRGSECWHL 93
Score = 30.8 bits (68), Expect = 1.3
Identities = 39/135 (28%), Positives = 43/135 (31%), Gaps = 37/135 (27%)
Query: 161 SPVRWREGRHRGCRAPFPARGY---SPGSGAGRPGAPQCALVVYTLKPFEFE-------- 209
SPV W G + G SPG P PQ V T P +F
Sbjct: 121 SPVPWTGTGTEGXECWHLSSGSVHPSPG-----PAPPQRVRSVGTCLPGQFTRPLDRHRH 175
Query: 210 --SACWCLSSP--RPCKGTANPI-----------------SQTANRGARKSSALPRLHNT 248
S CW LSS P G A P + TA G + LP L
Sbjct: 176 RGSECWHLSSGSVHPSPGPAPPQRVRVLAPVFRICSPVPWTGTATEGQSVGTCLPDLFTR 235
Query: 249 PLALSVHRGRPAWDL 263
PL HRG W L
Sbjct: 236 PLDRHRHRGSECWHL 250
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 175
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 176 PFPARGYSPG 185
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|239751647 PREDICTED: hypothetical protein XP_002347957 [Homo
sapiens]
Length = 150
Score = 31.6 bits (70), Expect = 0.76
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 24/98 (24%)
Query: 51 SILQRHTTLG---------SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQY 101
++LQ+H G SPA R L R+ L R +P
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAAL---------- 99
Query: 102 SPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLL 139
PSR+ SPR P R P VS R TA W PGP L
Sbjct: 100 -PSRLPSPRPRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 175
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 176 PFPARGYSPG 185
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|239746157 PREDICTED: hypothetical protein XP_002343679 [Homo
sapiens]
Length = 150
Score = 31.6 bits (70), Expect = 0.76
Identities = 32/98 (32%), Positives = 38/98 (38%), Gaps = 24/98 (24%)
Query: 51 SILQRHTTLG---------SPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQY 101
++LQ+H G SPA R L R+ L R +P
Sbjct: 50 NLLQQHVDTGGLQSPPPRPSPALSARSSRRALARTALPGRGRGAPGCAAL---------- 99
Query: 102 SPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPGPLL 139
PSR+ SPR P R P VS R TA W PGP L
Sbjct: 100 -PSRLPSPRPRPSRRAPP-PVSRR---TARGWEPGPTL 132
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 31.6 bits (70), Expect = 0.76
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 123 SERALATAGSWCPGPLLTQLT---FQNSAAQP----GGEDLTPSQSPVRWREGRHRGCRA 175
SER A SW PGPL Q T + S QP G+ + + R GR RG +
Sbjct: 71 SERGRGPAASWAPGPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGGS 130
Query: 176 PFPARGYSPG 185
P G + G
Sbjct: 131 PAAREGDAAG 140
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 31.6 bits (70), Expect = 0.76
Identities = 39/147 (26%), Positives = 47/147 (31%), Gaps = 11/147 (7%)
Query: 53 LQRHTTLGSPADEPRDLPFGLGRSWLGVSNRSSPA--AEPSAAPLRIPEQYSPSRIKSPR 110
L H GSPA P G + PA A P + P SP R P
Sbjct: 58 LGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRR---PL 114
Query: 111 SSPGFRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRH 170
G P + +AGS P P + A P G + + R G
Sbjct: 115 VPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPA-PAGPAKPAGPAALAARAGP- 172
Query: 171 RGCRAPFPARGYSPGSGAGRPGAPQCA 197
P P G PG G G+P P A
Sbjct: 173 ----GPGPGPGPGPGPGPGKPAGPGAA 195
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 31.6 bits (70), Expect = 0.76
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 81 SNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAGSWCPG---P 137
S +PA+EP+AA R + + +R + PR G R P+ +++ + + P
Sbjct: 1129 SEEDTPASEPAAALPRKSGRAAATRSRIPRPI-GLRMPMPVAAQQPASRSHGAAPALDTA 1187
Query: 138 LLTQLTFQNSAAQPGGEDLTPSQSPVR-WREGR-HRGCRAPFPARGYSPGS 186
+ ++L Q DL P Q P R GR G R P P P S
Sbjct: 1188 ITSRLQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPAS 1238
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 31.2 bits (69), Expect = 0.99
Identities = 46/149 (30%), Positives = 56/149 (37%), Gaps = 20/149 (13%)
Query: 54 QRHTTLGSPADEP-RDLPFGL-GRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRS 111
Q H G P P R +G R+ R+ PA P AP R R + R
Sbjct: 66 QEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAPGR-------GRAAATRR 118
Query: 112 SPG---FRGPVFWVSERALATAGSWCPGPLLTQLTFQNSAAQP-GGEDLTPSQSPVRWRE 167
SP RG V ATA S T+ P GG L +R R
Sbjct: 119 SPAPGTARGSPAGVERAGGATAASSAG----TRSVPARRLPPPCGGTSLGAGSRALR-RP 173
Query: 168 GRHRGCRAPFPARGYS--PGSGAGRPGAP 194
G R+P +R ++ PG GA RPGAP
Sbjct: 174 GSAALPRSPSSSRRWAAMPGPGAPRPGAP 202
>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 31.2 bits (69), Expect = 0.99
Identities = 41/123 (33%), Positives = 46/123 (37%), Gaps = 21/123 (17%)
Query: 72 GLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGPVFWVSERALATAG 131
GL S S RSSPA APL PE+ K P + R VF A A+AG
Sbjct: 3 GLRASGASPSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPAR-QVF----PAAASAG 57
Query: 132 SWCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWREGRHRGCR-APFPARGYSPGSGAGR 190
+ SAA G TP + R R R P P SP A R
Sbjct: 58 R------------EGSAAPDGARGSTPGLAASRELSPPPRAPRTVPAPHPRLSP---ARR 102
Query: 191 PGA 193
PGA
Sbjct: 103 PGA 105
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 31.2 bits (69), Expect = 0.99
Identities = 45/177 (25%), Positives = 60/177 (33%), Gaps = 22/177 (12%)
Query: 6 AALPTQTSLLDPEPLFLTSRNVFRALGGKT-------QKIEKHNGNGHKAEDSILQRHTT 58
A LPT+ P L S + G T +K+ G G K + T
Sbjct: 288 ARLPTRCLPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQG------TR 341
Query: 59 LGSPADEPRDLPFGLGRSWLGVSNRSSPAAEPSAAPLRIPEQYSPSRIKSPRSSPGFRGP 118
LG+P P PF GR G + A P R ++ P R + + PG P
Sbjct: 342 LGAPHSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRR--RRWEPLRAQRSGARPGAPAP 399
Query: 119 VFWVSERAL---ATAGSWCPGPLLTQLTFQNSAAQPGGEDLTPSQSP----VRWREG 168
A A AG+ PG L + GG P+ +P RW G
Sbjct: 400 PLPCLPPAAVCHALAGAGAPGGRLELGLSPGTRLIRGGGAAVPTAAPPAPLPRWGPG 456
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 31.2 bits (69), Expect = 0.99
Identities = 49/178 (27%), Positives = 61/178 (34%), Gaps = 37/178 (20%)
Query: 112 SPGFRGPVFWVSERALATAGS-----WCPGPLLTQLTFQNSAAQPGGEDLTPSQSPVRWR 166
SPG RG + R GS +C G + T + A+ PG D T + R
Sbjct: 23 SPGRRGTAGNLPRRLPLAQGSPRCCRFCKGSVSTATVTSSGASAPGSADPTLGSTAARRA 82
Query: 167 EGR---HRGC---RAPFPAR----------GYSPGSGA------------GRPGAPQCAL 198
GC AP PAR + G A GR P+ A
Sbjct: 83 SAPWACPAGCCRANAPAPARNPRRKEPRRQSRATGKSARTRRACASPCRPGRHCGPETAR 142
Query: 199 VVYTLKPFEFESACWCLSSPRP--CKGTANPISQTANRGARKSSALPRLHNTPLALSV 254
L F LS+P P G A P R S++LP+ TP ALSV
Sbjct: 143 RPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPRRCRATSASLPQ--ETPFALSV 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,437,850
Number of Sequences: 37866
Number of extensions: 813645
Number of successful extensions: 2829
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 2776
Number of HSP's gapped (non-prelim): 158
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.