Guide to the Human Genome
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Name: HS6ST2 Sequence: fasta or formatted (605aa) NCBI GI: 116295254
Description:

heparan sulfate 6-O-sulfotransferase 2 isoform S

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [645aa] heparan sulfate 6-O-sulfotransferase 2 isoform L
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         36           2
 C cysteine            2.8         17           1
 D aspartate           3.8         23           2
 E glutamate           5.5         33           2
 F phenylalanine       4.8         29           2
 G glycine             6.1         37           2
 H histidine           2.6         16           1
 I isoleucine          2.3         14           1
 K lysine              5.1         31           2
 L leucine            10.6         64           3
 M methionine          2.1         13           1
 N asparagine          5.3         32           2
 P proline             5.6         34           2
 Q glutamine           6.1         37           1
 R arginine            9.6         58           4
 S serine              7.9         48           3
 T threonine           5.0         30           2
 V valine              5.1         31           2
 W tryptophan          1.3          8           1
 Y tyrosine            2.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heparan sulfate 6-O-sulfotransferase 2 isoform S [H... 
HS6ST2                0.984   heparan sulfate 6-O-sulfotransferase 2 isoform L [H...
HS6ST3                0.408   PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...
HS6ST3                0.408   heparan sulfate 6-O-sulfotransferase 3 
HS6ST1                0.391   heparan sulfate 6-O-sulfotransferase 1 
MED12                 0.012   mediator complex subunit 12 
ZNF853                0.011   zinc finger protein 853 
TOX3                  0.010   TOX high mobility group box family member 3 isoform...
TOX3                  0.010   TOX high mobility group box family member 3 isoform...
PPIG                  0.010   peptidylprolyl isomerase G 
LOC100170229          0.010   hypothetical protein LOC100170229 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 1 
PYGO1                 0.009   pygopus homolog 1 
FOXP2                 0.007   forkhead box P2 isoform I 
FOXP2                 0.007   forkhead box P2 isoform III 
FOXP2                 0.007   forkhead box P2 isoform II 
KIF16B                0.007   kinesin-like motor protein C20orf23 
SHANK1                0.007   SH3 and multiple ankyrin repeat domains 1 
IVL                   0.007   involucrin 
HOOK3                 0.007   golgi-associated microtubule-binding protein HOOK3 [...
FAM133B               0.007   hypothetical protein LOC257415 isoform 2 
FAM133B               0.007   hypothetical protein LOC257415 isoform 1 
TANC1                 0.007   tetratricopeptide repeat, ankyrin repeat and coiled...
CIR1                  0.007   CBF1 interacting corepressor 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
CAGE1                 0.007   cancer antigen 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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