Guide to the Human Genome
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Name: HS6ST2 Sequence: fasta or formatted (645aa) NCBI GI: 116295256
Description:

heparan sulfate 6-O-sulfotransferase 2 isoform L

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [605aa] heparan sulfate 6-O-sulfotransferase 2 isoform S
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         40           2
 C cysteine            2.6         17           1
 D aspartate           3.9         25           2
 E glutamate           5.1         33           2
 F phenylalanine       4.7         30           2
 G glycine             6.2         40           2
 H histidine           2.5         16           1
 I isoleucine          2.5         16           1
 K lysine              5.6         36           2
 L leucine            10.1         65           3
 M methionine          2.0         13           1
 N asparagine          5.6         36           2
 P proline             5.6         36           2
 Q glutamine           5.9         38           1
 R arginine            9.5         61           4
 S serine              8.5         55           3
 T threonine           5.3         34           2
 V valine              4.8         31           2
 W tryptophan          1.4          9           1
 Y tyrosine            2.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heparan sulfate 6-O-sulfotransferase 2 isoform L [H... 
HS6ST2                0.924   heparan sulfate 6-O-sulfotransferase 2 isoform S [H...
HS6ST3                0.372   PREDICTED: heparan sulfate 6-O-sulfotransferase 3 [...
HS6ST3                0.372   heparan sulfate 6-O-sulfotransferase 3 
HS6ST1                0.353   heparan sulfate 6-O-sulfotransferase 1 
MED12                 0.011   mediator complex subunit 12 
ZNF853                0.010   zinc finger protein 853 
TOX3                  0.009   TOX high mobility group box family member 3 isoform...
TOX3                  0.009   TOX high mobility group box family member 3 isoform...
PPIG                  0.009   peptidylprolyl isomerase G 
LOC100170229          0.009   hypothetical protein LOC100170229 
NCOR2                 0.008   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.008   nuclear receptor co-repressor 2 isoform 1 
PYGO1                 0.008   pygopus homolog 1 
FOXP2                 0.007   forkhead box P2 isoform I 
FOXP2                 0.007   forkhead box P2 isoform III 
FOXP2                 0.007   forkhead box P2 isoform II 
KIF16B                0.007   kinesin-like motor protein C20orf23 
SHANK1                0.007   SH3 and multiple ankyrin repeat domains 1 
IVL                   0.006   involucrin 
HOOK3                 0.006   golgi-associated microtubule-binding protein HOOK3 [...
FAM133B               0.006   hypothetical protein LOC257415 isoform 2 
FAM133B               0.006   hypothetical protein LOC257415 isoform 1 
TANC1                 0.006   tetratricopeptide repeat, ankyrin repeat and coiled...
CIR1                  0.006   CBF1 interacting corepressor 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.006   GRB10 interacting GYF protein 2 isoform b 
CAGE1                 0.006   cancer antigen 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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