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Search of human proteins with 116235460
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116235460 YTH domain family, member 3 [Homo sapiens]
(585 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116235460 YTH domain family, member 3 [Homo sapiens] 1212 0.0
gi|116812575 high glucose-regulated protein 8 [Homo sapiens] 797 0.0
gi|31377750 YTH domain family, member 1 [Homo sapiens] 790 0.0
gi|38505213 YTH domain containing 2 [Homo sapiens] 67 3e-11
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 66 8e-11
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 65 2e-10
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 65 2e-10
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 59 1e-08
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 59 1e-08
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 59 1e-08
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 59 1e-08
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 55 2e-07
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 55 2e-07
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 55 2e-07
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 55 2e-07
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 54 3e-07
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 54 3e-07
gi|190343021 Sec24-related protein D [Homo sapiens] 54 3e-07
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 54 4e-07
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 54 5e-07
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 52 1e-06
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 52 1e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 52 1e-06
gi|162951884 R3H domain containing 2 [Homo sapiens] 52 2e-06
gi|114431236 zinc finger protein 462 [Homo sapiens] 51 3e-06
gi|83977459 pleckstrin homology-like domain, family A, member 1 ... 51 3e-06
gi|116805348 trinucleotide repeat containing 6A [Homo sapiens] 51 3e-06
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 50 6e-06
gi|31543535 R3H domain containing 1 [Homo sapiens] 49 1e-05
gi|55741675 hypothetical protein LOC22889 [Homo sapiens] 49 1e-05
>gi|116235460 YTH domain family, member 3 [Homo sapiens]
Length = 585
Score = 1212 bits (3135), Expect = 0.0
Identities = 585/585 (100%), Positives = 585/585 (100%)
Query: 1 MSATSVDQRPKGQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSY 60
MSATSVDQRPKGQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSY
Sbjct: 1 MSATSVDQRPKGQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPSY 60
Query: 61 YAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLG 120
YAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLG
Sbjct: 61 YAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLG 120
Query: 121 QHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSK 180
QHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSK
Sbjct: 121 QHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSK 180
Query: 181 VPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAA 240
VPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAA
Sbjct: 181 VPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAA 240
Query: 241 IARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTI 300
IARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTI
Sbjct: 241 IARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTI 300
Query: 301 IQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNR 360
IQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNR
Sbjct: 301 IQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNR 360
Query: 361 GAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFI 420
GAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFI
Sbjct: 361 GAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFI 420
Query: 421 IKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMK 480
IKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMK
Sbjct: 421 IKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMK 480
Query: 481 SVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPL 540
SVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPL
Sbjct: 481 SVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPL 540
Query: 541 EKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNKQ 585
EKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNKQ
Sbjct: 541 EKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRERNRNKQ 585
>gi|116812575 high glucose-regulated protein 8 [Homo sapiens]
Length = 579
Score = 797 bits (2059), Expect = 0.0
Identities = 405/598 (67%), Positives = 468/598 (78%), Gaps = 42/598 (7%)
Query: 1 MSATSV-DQRPKGQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPS 59
MSA+S+ +QRPKGQGNKV QNGS+HQKD +NDDDFEPYLS Q +N+Y MSD Y+PS
Sbjct: 1 MSASSLLEQRPKGQGNKV--QNGSVHQKDGLNDDDFEPYLSPQARPNNAYTAMSDSYLPS 58
Query: 60 YYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFL 119
YY+PSIGF YSLGEAAWST GD MPYLT+YGQ+SNGE H++PD +F QPGALG+TP FL
Sbjct: 59 YYSPSIGFSYSLGEAAWSTGGDTAMPYLTSYGQLSNGEPHFLPDAMFGQPGALGSTP-FL 117
Query: 120 GQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLS 179
GQHGFNFFP DFS WG + SQGQSTQSS YSS+Y Y PSSLG A+ DGQ+ F N+TL+
Sbjct: 118 GQHGFNFFPSGIDFSAWGNNSSQGQSTQSSGYSSNYAYAPSSLGGAMIDGQSAFANETLN 177
Query: 180 KVPGISSIEQGMTGLKIGG-DLTAAVTKTVGTALSSSGMTS--IATNSVPPVSSAAPKPT 236
K PG+++I+QGM LK+G ++ + V K VG+A+ S +TS +A+NS+PP + A PKP
Sbjct: 178 KAPGMNTIDQGMAALKLGSTEVASNVPKVVGSAVGSGSITSNIVASNSLPPATIAPPKPA 237
Query: 237 SWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLP 296
SWA IA KPAK QPKLK K GI GS++PPPPIKHNM+IGTWD KG V KAP V
Sbjct: 238 SWADIASKPAKQQPKLKTKN--GIAGSSLPPPPIKHNMDIGTWDNKGPVAKAPSQALV-- 293
Query: 297 PQTIIQ----QPQPLIQP----PPLVQSQLPQQ-QPQPPQPQQQQGPQPQAQPHQVQPQQ 347
Q I Q PQP+ Q PP+ Q+ + QQ QP PP P Q P Q+ QQ
Sbjct: 294 -QNIGQPTQGSPQPVGQQANNSPPVAQASVGQQTQPLPPPPPQ---------PAQLSVQQ 343
Query: 348 QQLQ-NRWVAPRNRGAGFNQN----NGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAIN 402
Q Q RWVAPRNRG+GF N NG G G G P E HPVLEKL++IN
Sbjct: 344 QAAQPTRWVAPRNRGSGFGHNGVDGNGVGQSQAGSGSTPS-------EPHPVLEKLRSIN 396
Query: 403 NYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLY 462
NYNPKDFDWNLK+GRVFIIKSYSEDDIHRSIKY+IWCSTEHGNKRLDAAYRS+NGKGP+Y
Sbjct: 397 NYNPKDFDWNLKHGRVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVY 456
Query: 463 LLFSVNGSGHFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLE 522
LLFSVNGSGHFCGVAEMKS VDYN AGVWSQDKWKG+F+V+WIFVKDVPN+QLRHIRLE
Sbjct: 457 LLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLE 516
Query: 523 NNDNKPVTNSRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRER 580
NN+NKPVTNSRDTQEVPLEKAKQVLKIIA++KHTTSIFDDF+HYEKRQEEEE++++ER
Sbjct: 517 NNENKPVTNSRDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKER 574
>gi|31377750 YTH domain family, member 1 [Homo sapiens]
Length = 559
Score = 790 bits (2039), Expect = 0.0
Identities = 403/595 (67%), Positives = 459/595 (77%), Gaps = 46/595 (7%)
Query: 1 MSATSVD-QRPKGQGNKVSVQNGSIHQKDAVNDDDFEPYLSSQTNQSNSYPPMSDPYMPS 59
MSATSVD QR KGQ NKV QNGS+HQKD V+D+DFEPYL+ Q+NQSNSYP MSDPY+ S
Sbjct: 1 MSATSVDTQRTKGQDNKV--QNGSLHQKDTVHDNDFEPYLTGQSNQSNSYPSMSDPYLSS 58
Query: 60 YYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFL 119
YY PSIGFPYSL EA WSTAGD P+PYLTTYGQ+SNG+HH++ D VF QPG LGN +
Sbjct: 59 YYPPSIGFPYSLNEAPWSTAGDPPIPYLTTYGQLSNGDHHFMHDAVFGQPGGLGNN---I 115
Query: 120 GQHGFNFFPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLS 179
QH FNFFP N FS WGTSGSQGQ TQSSAY SSY YPPSSLG + DGQ GF +DTLS
Sbjct: 116 YQHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGSSYTYPPSSLGGTVVDGQPGFHSDTLS 175
Query: 180 KVPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIAT-NSVPPVSSAAPKPTSW 238
K PG++S+EQGM GLKIG D++++ KTVG+ +SS +T + + N V+ KPTSW
Sbjct: 176 KAPGMNSLEQGMVGLKIG-DVSSSAVKTVGSVVSSVALTGVLSGNGGTNVNMPVSKPTSW 234
Query: 239 AAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQ 298
AAIA KPAKPQPK+K K +GG +PPPPIKHNM+IGTWD KG V KAP
Sbjct: 235 AAIASKPAKPQPKMKTKSGPVMGGG-LPPPPIKHNMDIGTWDNKGPVPKAP--------- 284
Query: 299 TIIQQPQPLIQPPPLVQSQLPQQQPQP---PQPQQQQGPQPQAQPHQVQPQ----QQQLQ 351
+PQQ P P PQPQQ P P P QPQ QQ Q
Sbjct: 285 -------------------VPQQAPSPQAAPQPQQVAQPLPAQPPALAQPQYQSPQQPPQ 325
Query: 352 NRWVAPRNRGAGFNQNNGAGSENFGLGVVPVSASPSSVEVHPVLEKLKAINNYNPKDFDW 411
RWVAPRNR A F Q+ GAGS++ G V +++PS VE HPVLEKLKA ++YNPK+F+W
Sbjct: 326 TRWVAPRNRNAAFGQSGGAGSDSNSPGNVQPNSAPS-VESHPVLEKLKAAHSYNPKEFEW 384
Query: 412 NLKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSG 471
NLK+GRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLD+A+R ++ KGP+YLLFSVNGSG
Sbjct: 385 NLKSGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSG 444
Query: 472 HFCGVAEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTN 531
HFCGVAEMKS VDY AGVWSQDKWKGKF+V+WIFVKDVPNNQLRHIRLENNDNKPVTN
Sbjct: 445 HFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTN 504
Query: 532 SRDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEEEAMRRER-NRNKQ 585
SRDTQEVPLEKAKQVLKII+++KHTTSIFDDFAHYEKRQEEEE +R+ER +RNKQ
Sbjct: 505 SRDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEEEVVRKERQSRNKQ 559
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 67.4 bits (163), Expect = 3e-11
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
R FI+KS + ++ S + IW +T ++L+ A+ +YL+FSV GSGHF G
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWE---SSIVYLVFSVQGSGHFQGF 1345
Query: 477 AEMKSVVDYNAYAGVWSQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQ 536
+ M S + W G F+V+WI + +P H+ NDNK V SRD Q
Sbjct: 1346 SRMSSEIGREKSQD-WGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQ 1404
Query: 537 EVPLEKAKQVLKI 549
E+ +Q+L++
Sbjct: 1405 ELEPLVGEQLLQL 1417
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 66.2 bits (160), Expect = 8e-11
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 383 SASPSSVEVHPVLEKL----KAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRSIKYSIW 438
SAS S EKL +A+ + L++ R F+IKS + +++ + +W
Sbjct: 318 SASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVW 377
Query: 439 CSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGVAEMKSVVDYNAYAGVW------ 492
+ K+L+ A+RS + L+FSV SG F G A + S + W
Sbjct: 378 STLPVNEKKLNLAFRSARS---VILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGM 434
Query: 493 SQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNSRDTQEVPLEKAKQV 546
S G F++ WI +++P + H+ N++KPV RD QE+ LE Q+
Sbjct: 435 SAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQL 488
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 64.7 bits (156), Expect = 2e-10
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 224 SVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKG 283
++PP A P A+ + P PQP + V + P PP+ +M + + ++
Sbjct: 879 ALPP--KPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLT-SMQMQLYLQQ- 934
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPP--PLVQSQLPQQQPQPPQPQQQQGPQPQAQPH 341
+ K P P+LP + QP P + PP P VQ QL QQ P PP PQ Q PQ Q QP
Sbjct: 935 -LQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPP 993
Query: 342 ----QVQPQQ 347
+QP Q
Sbjct: 994 PRPVHLQPMQ 1003
Score = 42.0 bits (97), Expect = 0.002
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 298 QTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQ 347
Q + Q P P+ Q PP PQQ P PP PQQQQ P P P + PQQ
Sbjct: 744 QQMQQAPAPVPQQPP----PPPQQPPPPPPPQQQQQPPPPPPPPSM-PQQ 788
Score = 38.5 bits (88), Expect = 0.017
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 290 PTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQP 340
P QP PPQ QP P PPP Q Q P P PP QQ P ++ P
Sbjct: 754 PQQPPPPPQ----QPPP---PPPPQQQQQPPPPPPPPSMPQQAAPAMKSSP 797
Score = 38.1 bits (87), Expect = 0.023
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
Query: 289 PPTQ------PVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQ 342
PP Q P + P I+Q P + PP P Q P P PQ Q P P QP Q
Sbjct: 216 PPVQATPHPFPAVTPDLIVQTPVMTVVPPQ------PLQTPPPVPPQPQPPPAPAPQPVQ 269
Query: 343 VQP 345
P
Sbjct: 270 SHP 272
Score = 34.7 bits (78), Expect = 0.25
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 297 PQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVA 356
P + QQP P Q PP QQQP PP P P + P Q P + ++A
Sbjct: 750 PAPVPQQPPPPPQQPPPPPPPQQQQQPPPP-------PPPPSMPQQAAPAMKSSPPPFIA 802
Score = 33.5 bits (75), Expect = 0.56
Identities = 37/144 (25%), Positives = 53/144 (36%), Gaps = 25/144 (17%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPP------PPIKHNMNIGTW 279
PP P P + P P P P+ S+ PP P ++ + +
Sbjct: 758 PPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVF 817
Query: 280 DEKGS----VVKAPPTQPVLPPQTIIQQP----------QPLIQPPPLVQSQLPQQQPQP 325
D G ++ P QP LPP + QP Q + PP + + LPQQ +P
Sbjct: 818 DPIGHFTQPILHLP--QPELPPH--LPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRP 873
Query: 326 PQPQQQQGPQPQAQPHQVQPQQQQ 349
P+P A+P V P Q
Sbjct: 874 SNRAAALPPKP-ARPPAVSPALTQ 896
Score = 32.3 bits (72), Expect = 1.2
Identities = 16/32 (50%), Positives = 16/32 (50%)
Query: 320 QQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQ 351
QQ Q P P QQ P P QP P QQQ Q
Sbjct: 744 QQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQ 775
Score = 32.0 bits (71), Expect = 1.6
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 292 QPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQ 351
QP PP P P + P +VQ+ P PPQP Q P P P Q +Q
Sbjct: 212 QPNPPPVQATPHPFPAVTPDLIVQT--PVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQ 269
Query: 352 N 352
+
Sbjct: 270 S 270
Score = 31.6 bits (70), Expect = 2.1
Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 11/107 (10%)
Query: 222 TNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDE 281
T + P S P T A+ + PQP P + + P P + ++ + T
Sbjct: 186 TGTAKPGVSTVPNTTQ-ASTPPQTQTPQPNPPP-----VQATPHPFPAVTPDLIVQT--- 236
Query: 282 KGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQP 328
V+ P QP+ P + QPQP P P P PQP
Sbjct: 237 --PVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQP 281
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 64.7 bits (156), Expect = 2e-10
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 413 LKNGRVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGH 472
L++ R F+IKS + +++ + +W + K+L+ A+RS + L+FSV SG
Sbjct: 334 LQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARS---VILIFSVRESGK 390
Query: 473 FCGVAEMKSVVDYNAYAGVW------SQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDN 526
F G A + S + W S G F++ WI +++P + H+ N++
Sbjct: 391 FQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEH 450
Query: 527 KPVTNSRDTQEVPLEKAKQV 546
KPV RD QE+ LE Q+
Sbjct: 451 KPVKIGRDGQEIELECGTQL 470
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 1e-08
Identities = 62/218 (28%), Positives = 85/218 (38%), Gaps = 58/218 (26%)
Query: 140 GSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGD 199
GS +T++ SSY S++G +I + + + + SS+ Q
Sbjct: 1554 GSIESTTENYENPSSYD---STMGGSICGNSSSQSSCSYGGLSSSSSLTQS--------- 1601
Query: 200 LTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVG 259
+ VT+ + + SS M + +SV P ++ + K + R P+ Q +
Sbjct: 1602 -SCVVTQQMASMGSSCSM--MQQSSVQPAANCSIKSPQSCVVERPPSNQQQQ-------- 1650
Query: 260 IGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLP 319
PPPP PP QP PP QPQP QPPP Q P
Sbjct: 1651 ------PPPP-------------------PPQQPQPPPP----QPQPAPQPPP--PQQQP 1679
Query: 320 QQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAP 357
QQQPQ PQPQQ P P P Q P Q N P
Sbjct: 1680 QQQPQ-PQPQQ---PPPPPPPQQQPPLSQCSMNNSFTP 1713
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 1e-08
Identities = 62/218 (28%), Positives = 85/218 (38%), Gaps = 58/218 (26%)
Query: 140 GSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGD 199
GS +T++ SSY S++G +I + + + + SS+ Q
Sbjct: 1554 GSIESTTENYENPSSYD---STMGGSICGNSSSQSSCSYGGLSSSSSLTQS--------- 1601
Query: 200 LTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVG 259
+ VT+ + + SS M + +SV P ++ + K + R P+ Q +
Sbjct: 1602 -SCVVTQQMASMGSSCSM--MQQSSVQPAANCSIKSPQSCVVERPPSNQQQQ-------- 1650
Query: 260 IGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLP 319
PPPP PP QP PP QPQP QPPP Q P
Sbjct: 1651 ------PPPP-------------------PPQQPQPPPP----QPQPAPQPPP--PQQQP 1679
Query: 320 QQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAP 357
QQQPQ PQPQQ P P P Q P Q N P
Sbjct: 1680 QQQPQ-PQPQQ---PPPPPPPQQQPPLSQCSMNNSFTP 1713
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 58.9 bits (141), Expect = 1e-08
Identities = 62/218 (28%), Positives = 85/218 (38%), Gaps = 58/218 (26%)
Query: 140 GSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGD 199
GS +T++ SSY S++G +I + + + + SS+ Q
Sbjct: 1554 GSIESTTENYENPSSYD---STMGGSICGNSSSQSSCSYGGLSSSSSLTQS--------- 1601
Query: 200 LTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVG 259
+ VT+ + + SS M + +SV P ++ + K + R P+ Q +
Sbjct: 1602 -SCVVTQQMASMGSSCSM--MQQSSVQPAANCSIKSPQSCVVERPPSNQQQQ-------- 1650
Query: 260 IGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLP 319
PPPP PP QP PP QPQP QPPP Q P
Sbjct: 1651 ------PPPP-------------------PPQQPQPPPP----QPQPAPQPPP--PQQQP 1679
Query: 320 QQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAP 357
QQQPQ PQPQQ P P P Q P Q N P
Sbjct: 1680 QQQPQ-PQPQQ---PPPPPPPQQQPPLSQCSMNNSFTP 1713
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 58.9 bits (141), Expect = 1e-08
Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 242 ARKPAKPQPKLKPKGN-----------VGIGGSAVPPPPIKHNMNIGTWDEK-GSVVKAP 289
A KP K +P K K + G+ + PP P + +N+ K P
Sbjct: 911 ANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRP 970
Query: 290 PTQPVLPPQT--IIQQPQPLIQ---PPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQ 344
P P P + + Q P L+Q PPP Q PQQQPQP PQQQQ P P +QP Q
Sbjct: 971 PGYPSQPVEQRPLQQMPPQLMQHVAPPP----QPPQQQPQPQLPQQQQ-PPPPSQPQSQQ 1025
Query: 345 PQQQQLQ 351
QQQQ Q
Sbjct: 1026 QQQQQQQ 1032
Score = 42.0 bits (97), Expect = 0.002
Identities = 69/328 (21%), Positives = 117/328 (35%), Gaps = 34/328 (10%)
Query: 37 PYLSSQTNQSNSYPPMSDPYMPSYYAPSIGFPYSLGEAAWSTAGDQPMPYLTTYGQMSNG 96
P ++ Q PP ++P +P + + P G G+ P ++ Q N
Sbjct: 444 PTVNQTQQQMGPRPPQNNP-LPQGFQQPVSSP---GRNPMVQQGNVPPNFMVMQQQPPNQ 499
Query: 97 EHHYIPDGVFSQPGALGNTPPFL--GQHGFNFFPGNADFSTWGTSGSQG----QSTQSSA 150
+ G+ P L PP GQ NF G +T T G+ G Q+ Q+
Sbjct: 500 GPQSLHPGLGGMPKRL---PPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQ 556
Query: 151 YSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQ-GMTGLKIGGDLTAAVTKTVG 209
++ G P ++ G +L + G + +Q G +G+ G
Sbjct: 557 HAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQG 616
Query: 210 TALSSSGMTS--IATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLK---PKGNVGIGGSA 264
GM + + P + ++R PQ ++ P N+G
Sbjct: 617 PPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQR 676
Query: 265 VPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQ-- 322
+ PP K ++ ++G + AP Q + P ++ Q P+I+ Q Q +QQ
Sbjct: 677 MTPP--KQMLS-----QQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFN 729
Query: 323 ------PQPPQPQQQQGPQPQAQPHQVQ 344
P Q +GP P Q + VQ
Sbjct: 730 TQNQSNVMPGPAQIMRGPTPNMQGNMVQ 757
Score = 41.6 bits (96), Expect = 0.002
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 17/136 (12%)
Query: 217 MTSIATNSVPP---VSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHN 273
M + AT +PP VSS+ P P P+L+P+ S P +
Sbjct: 176 MNNPATVMIPPGGNVSSSMMAPG-----------PNPELQPRTPRPASQSDAMDPLLSGL 224
Query: 274 MNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQG 333
GS+ APP P + P ++ +Q P P Q Q QQQ Q Q QQQQ
Sbjct: 225 HIQQQSHPSGSL--APPHHP-MQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQ 281
Query: 334 PQPQAQPHQVQPQQQQ 349
Q Q Q Q QQQ
Sbjct: 282 QQQQLQARPPQQHQQQ 297
Score = 30.8 bits (68), Expect = 3.6
Identities = 39/146 (26%), Positives = 47/146 (32%), Gaps = 25/146 (17%)
Query: 266 PPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQ-----PQPLIQP---------- 310
PPPP + + P Q P +Q P PL QP
Sbjct: 372 PPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASS 431
Query: 311 PPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQL----QNRWVAPRNRGAGF-- 364
P Q P P Q QQQ GP+P Q QQ + +N V N F
Sbjct: 432 PSSFQQGSPASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMV 491
Query: 365 ----NQNNGAGSENFGLGVVPVSASP 386
N G S + GLG +P P
Sbjct: 492 MQQQPPNQGPQSLHPGLGGMPKRLPP 517
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 54.7 bits (130), Expect = 2e-07
Identities = 55/175 (31%), Positives = 68/175 (38%), Gaps = 19/175 (10%)
Query: 208 VGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPK-LKPKGNV-GIGGSAV 265
+G S+G+ +P P P +P P + +G G GG A+
Sbjct: 818 IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAM 877
Query: 266 PPPPIKHNMNIGTWDEKGSVVKAPPTQPVL----PPQTIIQQPQPLIQPPPLVQSQLPQQ 321
PPP H M G + G V+ P P L P + QPP Q Q Q
Sbjct: 878 PPP---HGMK-GPFPPHGPFVR-PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQ 932
Query: 322 QPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGSENFG 376
PQ PQ QQQQ P P QP Q Q QQ +N NR N+G E FG
Sbjct: 933 APQQPQQQQQQQPPPSQQPPPTQQQPQQFRN-----DNRQ---QFNSGRDQERFG 979
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 221 ATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWD 280
A + P ++ P PT+ A PA P P+ G G + P + N+ +
Sbjct: 284 AVTTTAPAAAVPPAPTATVPAAAAPAAASPP-PPQAPFGFPGDGMQQPAYTQHQNMDQFQ 342
Query: 281 EKGSVVKAPPTQPVLPPQTIIQQPQ-PLIQPPPLVQSQLPQQQPQPPQPQQQQGP-QPQA 338
+ ++ P +P Q P L+ PP P P PP Q Q Q Q
Sbjct: 343 PRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 339 QPHQVQPQQQQLQ 351
+P +P QQ+++
Sbjct: 403 EPLTQKPHQQEME 415
Score = 35.8 bits (81), Expect = 0.11
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 250 PKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTII-QQPQPLI 308
P ++P G G+GG P G D G + PP QP PQ QQPQ
Sbjct: 892 PFVRPGGMPGLGGPGPGPG--------GPEDRDGR--QQPPQQPQQQPQPQAPQQPQQQQ 941
Query: 309 QPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNN 368
Q P Q P Q QP Q + Q + Q + ++ NR R R N+N+
Sbjct: 942 QQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYG--NRND 999
Query: 369 GAGSEN 374
+ N
Sbjct: 1000 DRDNSN 1005
Score = 29.6 bits (65), Expect = 8.0
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 288 APPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGP 334
+P +P+ P I P P+ PPP Q+P QP PP Q P
Sbjct: 656 SPIPKPLPVPVPPIPVPAPITVPPP----QVPPHQPGPPVVGALQPP 698
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 54.7 bits (130), Expect = 2e-07
Identities = 55/175 (31%), Positives = 68/175 (38%), Gaps = 19/175 (10%)
Query: 208 VGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPK-LKPKGNV-GIGGSAV 265
+G S+G+ +P P P +P P + +G G GG A+
Sbjct: 825 IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAM 884
Query: 266 PPPPIKHNMNIGTWDEKGSVVKAPPTQPVL----PPQTIIQQPQPLIQPPPLVQSQLPQQ 321
PPP H M G + G V+ P P L P + QPP Q Q Q
Sbjct: 885 PPP---HGMK-GPFPPHGPFVR-PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQ 939
Query: 322 QPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGSENFG 376
PQ PQ QQQQ P P QP Q Q QQ +N NR N+G E FG
Sbjct: 940 APQQPQQQQQQQPPPSQQPPPTQQQPQQFRN-----DNRQ---QFNSGRDQERFG 986
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 221 ATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWD 280
A + P ++ P PT+ A PA P P+ G G + P + N+ +
Sbjct: 269 AVTTTAPAAAVPPAPTATVPAAAAPAAASPP-PPQAPFGFPGDGMQQPAYTQHQNMDQFQ 327
Query: 281 EKGSVVKAPPTQPVLPPQTIIQQPQ-PLIQPPPLVQSQLPQQQPQPPQPQQQQGP-QPQA 338
+ ++ P +P Q P L+ PP P P PP Q Q Q Q
Sbjct: 328 PRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 387
Query: 339 QPHQVQPQQQQLQ 351
+P +P QQ+++
Sbjct: 388 EPLTQKPHQQEME 400
Score = 35.8 bits (81), Expect = 0.11
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 250 PKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTII-QQPQPLI 308
P ++P G G+GG P G D G + PP QP PQ QQPQ
Sbjct: 899 PFVRPGGMPGLGGPGPGPG--------GPEDRDGR--QQPPQQPQQQPQPQAPQQPQQQQ 948
Query: 309 QPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNN 368
Q P Q P Q QP Q + Q + Q + ++ NR R R N+N+
Sbjct: 949 QQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYG--NRND 1006
Query: 369 GAGSEN 374
+ N
Sbjct: 1007 DRDNSN 1012
Score = 29.6 bits (65), Expect = 8.0
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 288 APPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGP 334
+P +P+ P I P P+ PPP Q+P QP PP Q P
Sbjct: 641 SPIPKPLPVPVPPIPVPAPITVPPP----QVPPHQPGPPVVGALQPP 683
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 54.7 bits (130), Expect = 2e-07
Identities = 55/175 (31%), Positives = 68/175 (38%), Gaps = 19/175 (10%)
Query: 208 VGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPK-LKPKGNV-GIGGSAV 265
+G S+G+ +P P P +P P + +G G GG A+
Sbjct: 840 IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAM 899
Query: 266 PPPPIKHNMNIGTWDEKGSVVKAPPTQPVL----PPQTIIQQPQPLIQPPPLVQSQLPQQ 321
PPP H M G + G V+ P P L P + QPP Q Q Q
Sbjct: 900 PPP---HGMK-GPFPPHGPFVR-PGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQ 954
Query: 322 QPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGSENFG 376
PQ PQ QQQQ P P QP Q Q QQ +N NR N+G E FG
Sbjct: 955 APQQPQQQQQQQPPPSQQPPPTQQQPQQFRN-----DNRQ---QFNSGRDQERFG 1001
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 221 ATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWD 280
A + P ++ P PT+ A PA P P+ G G + P + N+ +
Sbjct: 284 AVTTTAPAAAVPPAPTATVPAAAAPAAASPP-PPQAPFGFPGDGMQQPAYTQHQNMDQFQ 342
Query: 281 EKGSVVKAPPTQPVLPPQTIIQQPQ-PLIQPPPLVQSQLPQQQPQPPQPQQQQGP-QPQA 338
+ ++ P +P Q P L+ PP P P PP Q Q Q Q
Sbjct: 343 PRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQN 402
Query: 339 QPHQVQPQQQQLQ 351
+P +P QQ+++
Sbjct: 403 EPLTQKPHQQEME 415
Score = 35.8 bits (81), Expect = 0.11
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 250 PKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTII-QQPQPLI 308
P ++P G G+GG P G D G + PP QP PQ QQPQ
Sbjct: 914 PFVRPGGMPGLGGPGPGPG--------GPEDRDGR--QQPPQQPQQQPQPQAPQQPQQQQ 963
Query: 309 QPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNN 368
Q P Q P Q QP Q + Q + Q + ++ NR R R N+N+
Sbjct: 964 QQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYG--NRND 1021
Query: 369 GAGSEN 374
+ N
Sbjct: 1022 DRDNSN 1027
Score = 29.6 bits (65), Expect = 8.0
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 288 APPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGP 334
+P +P+ P I P P+ PPP Q+P QP PP Q P
Sbjct: 656 SPIPKPLPVPVPPIPVPAPITVPPP----QVPPHQPGPPVVGALQPP 698
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 54.7 bits (130), Expect = 2e-07
Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 216 GMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMN 275
G + A + PP + A P P + A A P+ +A PP
Sbjct: 117 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRA----------AAAAATAPPSPGPAQ 166
Query: 276 IGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLP--QQQPQPP-QPQQQQ 332
G ++ + + APP P PP + P PPP V ++ P PQPP PQQQQ
Sbjct: 167 PGPRAQRAAPLAAPPPAPAAPP-AVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQ 225
Query: 333 GPQPQAQP 340
P PQ QP
Sbjct: 226 PPPPQPQP 233
Score = 48.5 bits (114), Expect = 2e-05
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 17/112 (15%)
Query: 227 PVSSAAPK--PTSWAAIARKPAKPQPKLK-PKGNVGIGGSAVPPPPIKHNMNIGTWDEKG 283
PV++AAP P + AA A P P P P+ +A PP P
Sbjct: 139 PVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPA------------A 186
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQ 335
APP P P + +P + PPP Q P QQ QPP PQ Q P+
Sbjct: 187 PPAVAPPAGPRRAPPPAVAAREPPLPPPP--QPPAPPQQQQPPPPQPQPPPE 236
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 54.3 bits (129), Expect = 3e-07
Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 177 TLSKVPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPK-- 234
+L +P S G+ G +A + + + +S S A + + SA P
Sbjct: 282 SLQLLPWRESSLDGLGGTGKDNLTSATLPRNYKVSPLASDRRSDAGSYRRSLGSAGPSGT 341
Query: 235 -PTSWAAIAR---KPAKPQPKLKPKGNVGIGGSAVPPPPIK--HNMNIGTWDEKGSVVKA 288
P SW ++R P+ PQP+ P+ P P+ + W+ S
Sbjct: 342 LPRSWQPVSRIPMPPSSPQPRGAPRQR---------PIPLSMIFKLQNAFWEHGAS---- 388
Query: 289 PPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPP-QPQQQQGPQPQAQPHQVQPQQ 347
+ +LP + + PPP +Q Q PQ QPQP QPQ Q PQPQ QP P
Sbjct: 389 ---RAMLPGSPLFTRA-----PPPKLQPQ-PQPQPQPQSQPQPQLPPQPQTQPQTPTPAP 439
Query: 348 QQLQNRWVAPRNRG 361
Q Q W P N G
Sbjct: 440 QHPQQTW-PPVNEG 452
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 54.3 bits (129), Expect = 3e-07
Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 177 TLSKVPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPK-- 234
+L +P S G+ G +A + + + +S S A + + SA P
Sbjct: 282 SLQLLPWRESSLDGLGGTGKDNLTSATLPRNYKVSPLASDRRSDAGSYRRSLGSAGPSGT 341
Query: 235 -PTSWAAIAR---KPAKPQPKLKPKGNVGIGGSAVPPPPIK--HNMNIGTWDEKGSVVKA 288
P SW ++R P+ PQP+ P+ P P+ + W+ S
Sbjct: 342 LPRSWQPVSRIPMPPSSPQPRGAPRQR---------PIPLSMIFKLQNAFWEHGAS---- 388
Query: 289 PPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPP-QPQQQQGPQPQAQPHQVQPQQ 347
+ +LP + + PPP +Q Q PQ QPQP QPQ Q PQPQ QP P
Sbjct: 389 ---RAMLPGSPLFTRA-----PPPKLQPQ-PQPQPQPQSQPQPQLPPQPQTQPQTPTPAP 439
Query: 348 QQLQNRWVAPRNRG 361
Q Q W P N G
Sbjct: 440 QHPQQTW-PPVNEG 452
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 54.3 bits (129), Expect = 3e-07
Identities = 69/284 (24%), Positives = 98/284 (34%), Gaps = 69/284 (24%)
Query: 90 YGQMSNGEHHYIPDGVFSQPGALGNT---------PPFLGQHGFNFFPGNADFSTWGTSG 140
YG + H P G+ G LG T PP G H F
Sbjct: 26 YGHYGDPSHTASPTGMMKPAGPLGATATRGMLPPGPPPPGPHQFG--------------- 70
Query: 141 SQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIGGDL 200
Q+ A+++ G+PP G N S P S + G +
Sbjct: 71 ------QNGAHAT--GHPPQRF-----PGPPPVNNVASSHAPYQPSAQSSYPG-----PI 112
Query: 201 TAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGI 260
+ + +G+ LS+ + S + PP S P P S ++ P PQP + G+
Sbjct: 113 STSSVTQLGSQLSAMQINSYGSGMAPP-SQGPPGPLSATSLQTPPRPPQPSILQPGS--- 168
Query: 261 GGSAVPPPPIKHN------MNIGTWDEKGSVVKAPPTQ----PVLPPQTIIQ--QPQPLI 308
+PPPP N + + + G PP P LP QT+ PQ
Sbjct: 169 --QVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQTLGAGYPPQQAN 226
Query: 309 QPPPLVQSQL---------PQQQPQPPQPQQQQGPQPQAQPHQV 343
P + +QL P Q PPQPQ++ P P QV
Sbjct: 227 SGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQV 270
Score = 35.0 bits (79), Expect = 0.19
Identities = 37/154 (24%), Positives = 53/154 (34%), Gaps = 21/154 (13%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSV 285
PP P P + A + P +P + G + S + ++ + GS
Sbjct: 80 PPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPI----STSSVTQLGSQLSAMQINSYGSG 135
Query: 286 VKAPPTQ-------------PVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQP---PQPQ 329
+ APP+Q P PPQ I QP + PPP P P P +P
Sbjct: 136 M-APPSQGPPGPLSATSLQTPPRPPQPSILQPGSQVLPPPPTTLNGPGASPLPLPMYRPD 194
Query: 330 QQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAG 363
GP P +Q P Q P+ +G
Sbjct: 195 GLSGPPPPNAQYQPPPLPGQTLGAGYPPQQANSG 228
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 53.9 bits (128), Expect = 4e-07
Identities = 68/236 (28%), Positives = 95/236 (40%), Gaps = 19/236 (8%)
Query: 127 FPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISS 186
F GN D S TSGS+ S+++ S + RA + + N L ++
Sbjct: 331 FRGNRDGSG-RTSGSRQSSSENELKWSDHQ-------RAWSSTDSDSSNRNLKPAMTKTA 382
Query: 187 IEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPA 246
G+T L GD T++ T++ G + +S + S +S P P + A
Sbjct: 383 SFGGITVLT-RGDSTSS-TRSTGKLSKAGSESSSSAGSSGSLSRTHP-PLQSTPLVSGVA 439
Query: 247 KPQPKLKPKGNVGIGGSAVPPPP--IKHNMNIGTWDEKGSVVKAPPT-QPVLPPQTIIQQ 303
P P GIGG P I + T GS++ P T QP + P
Sbjct: 440 AGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAI 499
Query: 304 PQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRN 359
P PL + + Q Q QP PQQQ PQPQ QVQP Q Q+ V R+
Sbjct: 500 YNPPTSQQPLRSAMVGQSQQQP--PQQQPSPQPQ---QQVQPPQPQMAGPLVTQRD 550
Score = 34.3 bits (77), Expect = 0.33
Identities = 32/120 (26%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 229 SSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKA 288
S P+P S + PQP +P + G +P G + G +
Sbjct: 566 SGETPEPPS-GPVYPSSLMPQPAQQPSYVIASTGQQLPT---------GGFSGSGPPISQ 615
Query: 289 PPTQPVLPPQTIIQQPQPLIQPPPLVQS-QLP---QQQPQPPQPQQQQGPQPQAQPHQVQ 344
QP PQ +QQP P P S Q P QQ +P P Q + Q P Q
Sbjct: 616 QVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMAPVQYNAQRSQQMPQAAQ 675
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 53.5 bits (127), Expect = 5e-07
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 239 AAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQ 298
+A+A+ P +P + P + + VPP P N+ +A P QP LPPQ
Sbjct: 901 SAVAQLPGQP---VYPAAFPQMAPTDVPPSPHHTVQNM----------RATPPQPALPPQ 947
Query: 299 TIIQQPQPLIQPPPLVQSQ--LPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNR 353
+ PQP++ P P + Q LP Q +PPQP PQP P V P Q L R
Sbjct: 948 PTLP-PQPVLPPQPTLPPQPVLPPQPTRPPQPVLP--PQPMLPPQPVLPPQPALPVR 1001
Score = 45.1 bits (105), Expect = 2e-04
Identities = 48/175 (27%), Positives = 70/175 (40%), Gaps = 39/175 (22%)
Query: 181 VPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPT--SW 238
+P ++ G+ L I +AV + G + + +A VPP +P T +
Sbjct: 884 IPLLAVAPPGVAALSIH----SAVAQLPGQPVYPAAFPQMAPTDVPP----SPHHTVQNM 935
Query: 239 AAIARKPA-KPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPP 297
A +PA PQP L P+ +PP P P QPVLPP
Sbjct: 936 RATPPQPALPPQPTLPPQ-------PVLPPQPTL------------------PPQPVLPP 970
Query: 298 QTIIQQPQPLIQPPPLVQSQ--LPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQL 350
Q + PQP++ P P++ Q LP Q P +P+ Q P+ P Q L
Sbjct: 971 QPT-RPPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQIL 1024
Score = 37.4 bits (85), Expect = 0.039
Identities = 39/149 (26%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Query: 209 GTALSSSGMTSIATNSVPPVSSAAPKPTSWAA---IARKPAKPQ--PKL----KPKGNVG 259
G+ + S +S + + ++ AAP P ++ P PQ P L +P G
Sbjct: 621 GSTVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPG 680
Query: 260 IGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLP 319
+ +VP P ++ D S P P P T QP P Q PP + P
Sbjct: 681 LPVGSVPAPACPPSLQQHFPDPAMSFAPVLPP-PSTPMPTGPGQPAPPGQQPPPLAQPTP 739
Query: 320 QQQPQPPQPQQQQGPQPQAQPHQVQPQQQ 348
Q PQP P P P + P Q
Sbjct: 740 LPQVLAPQPVVPLQPVPPHLPPYLAPASQ 768
Score = 33.1 bits (74), Expect = 0.73
Identities = 49/211 (23%), Positives = 68/211 (32%), Gaps = 40/211 (18%)
Query: 132 DFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGM 191
D T S QS+Q S S S + + G +P + + +Q
Sbjct: 617 DSGQGSTVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQP- 675
Query: 192 TGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPK 251
TAA VG+ + + S+ + P S AP + P+ P P
Sbjct: 676 ---------TAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAP-------VLPPPSTPMP- 718
Query: 252 LKPKGNVGIGGSAVP---PPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTI-------- 300
G G A P PPP+ + VV P P LPP
Sbjct: 719 ------TGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAP 772
Query: 301 -----IQQPQPLIQPPPLVQSQLPQQQPQPP 326
+Q PQ +QP V Q+P PP
Sbjct: 773 AQLKPLQMPQAPLQPLAQVPPQMPPIPVVPP 803
Score = 32.7 bits (73), Expect = 0.95
Identities = 47/178 (26%), Positives = 62/178 (34%), Gaps = 36/178 (20%)
Query: 204 VTKTVGTALSSSGMTSIATNSVPPV-------------SSAAPKPTSWAAIARKPAK-PQ 249
+T G + + T +VPPV S AAP P + A+ + K P
Sbjct: 804 ITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPH 863
Query: 250 PK----------LKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQT 299
P + P I AV PP + ++I S V P QPV P
Sbjct: 864 PPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAA-LSIH------SAVAQLPGQPVYPAAF 916
Query: 300 IIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAP 357
P + PP + + PPQP PQP P V P Q L + V P
Sbjct: 917 PQMAPTDV---PPSPHHTVQNMRATPPQPALP--PQPTLPPQPVLPPQPTLPPQPVLP 969
Score = 31.2 bits (69), Expect = 2.8
Identities = 32/132 (24%), Positives = 44/132 (33%), Gaps = 29/132 (21%)
Query: 216 GMTSIATNSVPPVSS-AAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNM 274
G+TS S P + AP + P P P+ + +PPP + +
Sbjct: 1425 GLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSP 1484
Query: 275 NIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPP----PLVQSQLPQQ------QPQ 324
+ GT PQ + QP PL+ L SQLP PQ
Sbjct: 1485 HSGT------------------PQPALGQPAPLLPAAVGAVSLATSQLPSPPLGPTVPPQ 1526
Query: 325 PPQPQQQQGPQP 336
PP + G P
Sbjct: 1527 PPSALESDGEGP 1538
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 52.4 bits (124), Expect = 1e-06
Identities = 94/374 (25%), Positives = 131/374 (35%), Gaps = 70/374 (18%)
Query: 36 EPYLSSQTN---------QSNSYPPMSDPYMPSYYAPSIGFPY--SLGEAAWSTAGDQPM 84
EPY Q N Q NSY P Y P A ++ P + G A + AG +P
Sbjct: 193 EPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPP 252
Query: 85 PYLTTYGQMSNGEHHYIPDGVFSQPG---ALGNTP-----PFLGQ--------HGFNFFP 128
P + S+ G G A G TP P L Q G+ +P
Sbjct: 253 PSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYP 312
Query: 129 GNADFSTWGTSGSQGQ-------------STQSSAYSSSYGYPPSSLGRAITDGQAGFGN 175
G D+S G G+ + ++A ++S G S ++ G +G G
Sbjct: 313 GG-DYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGG 371
Query: 176 DTLSKVPGISSIEQGMTGLK---IGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAA 232
L++ P SS M ++ GG T ++ G SG P S
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYGG--TNPYSQQQGPP---SGPQQGHGYPGQPYGSQT 426
Query: 233 PKPTSWAAIARKPAKP-----QPKLKPKGNVGIGGSAVP-PPPIKHNMNIGTWDEKGSVV 286
P+ R + ++ P G G G P + + ++
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486
Query: 287 KAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGP------------ 334
+ PP+Q + QQPQ QPP L SQ P Q QP QP QQ P
Sbjct: 487 QQPPSQTPHAQPSYQQQPQS--QPPQLQSSQPPYSQ-QPSQPPHQQSPAPYPSQQSTTQQ 543
Query: 335 QPQAQPHQVQPQQQ 348
PQ+QP QPQ Q
Sbjct: 544 HPQSQPPYSQPQAQ 557
Score = 38.1 bits (87), Expect = 0.023
Identities = 79/363 (21%), Positives = 114/363 (31%), Gaps = 70/363 (19%)
Query: 37 PYLSSQTNQSNSYPPMSDPY-MPSYYAPSIGFPYSL--GEAAWSTAGDQP------MPYL 87
P+ Q + PP P+ PSY P L + +S QP PY
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYP 535
Query: 88 TTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQ 147
+ Q S + H +SQP A P+ Q P Q Q +Q
Sbjct: 536 S---QQSTTQQHPQSQPPYSQPQAQS---PYQQQQPQQPAPSTLSQQA-AYPQPQSQQSQ 588
Query: 148 SSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIG---------- 197
+AYS PP L Q FG+ S P ++S + G + +
Sbjct: 589 QTAYSQQRFPPPQEL------SQDSFGSQA-SSAPSMTSSKGGQEDMNLSLQSRPSSLPD 641
Query: 198 -----GDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKL 252
DL + +S+SG++S P S TS + P P
Sbjct: 642 LSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVG 701
Query: 253 KPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPP 312
P + P + N + PP P +I+ P
Sbjct: 702 SPASVAQSRSGPLSPAAVPGN-------------QMPPRPPSGQSDSIMH--------PS 740
Query: 313 LVQSQLPQQQ---PQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNG 369
+ QS + Q + + PQ Q PQP + QP Q+ + G G Q N
Sbjct: 741 MNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQI--------HTGMGSYQQNS 792
Query: 370 AGS 372
GS
Sbjct: 793 MGS 795
Score = 37.4 bits (85), Expect = 0.039
Identities = 72/340 (21%), Positives = 110/340 (32%), Gaps = 77/340 (22%)
Query: 36 EPYLSSQTNQSNSYP--------PMSDPYMPSYYAP-----------SIGFPYSLGEAAW 76
EP + + N S P P S Y PS Y P S G +S
Sbjct: 1291 EPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFS----TQ 1346
Query: 77 STAGDQPMP-YLTTYGQMSNGEHHYIPDGVFSQP-----GALGNTPPFLGQHGFNFFPGN 130
T P P TT Q + DG + P G + + P GQ G
Sbjct: 1347 GTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQ-------GQ 1399
Query: 131 ADFSTWGTSGSQGQSTQSSAYSS-------SYGYPPSSLGRAITDGQAG----------F 173
+ Q S Q +A S YG + A T+ + F
Sbjct: 1400 PQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQF 1459
Query: 174 GNDTLSKVPGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSS-AA 232
G D +S PG ++ +Q M +GG + A+ + G + N S+ +A
Sbjct: 1460 GRDRVSAPPGTNA-QQNMPPQMMGGPIQASA-EVAQQGTMWQGRNDMTYNYANRQSTGSA 1517
Query: 233 PKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQ 292
P+ ++ + R + G+W G+ + PP
Sbjct: 1518 PQGPAYHGVNRTDEMLHTDQRANHE-------------------GSWPSHGT--RQPPYG 1556
Query: 293 PVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQ 332
P P + + P QPPP +Q+ +PQ P P+ +
Sbjct: 1557 PSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPME 1596
Score = 32.3 bits (72), Expect = 1.2
Identities = 50/188 (26%), Positives = 68/188 (36%), Gaps = 52/188 (27%)
Query: 247 KPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQT------- 299
+ +P + P+GN+ G A P + N + G + S + PP Q Q
Sbjct: 1289 RTEPGIGPEGNMSTG--APQPNLMPSNPDSGMY----SPSRYPPQQQQQQQQRHDSYGNQ 1342
Query: 300 IIQQPQPLIQPPPLVQSQLPQQQPQ-----------PP------------------QPQQ 330
Q P P P Q+ + QQQ Q PP QPQQ
Sbjct: 1343 FSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQ 1402
Query: 331 QQ----GPQPQAQPHQVQPQ-QQQLQNRW--VAPRNRGAGFNQNNGAGSEN---FGLGVV 380
QQ PQP +Q QP QQ + N++ P A + G +N F G
Sbjct: 1403 QQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAGGPQNQFPFQFGRD 1462
Query: 381 PVSASPSS 388
VSA P +
Sbjct: 1463 RVSAPPGT 1470
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 52.4 bits (124), Expect = 1e-06
Identities = 94/374 (25%), Positives = 131/374 (35%), Gaps = 70/374 (18%)
Query: 36 EPYLSSQTN---------QSNSYPPMSDPYMPSYYAPSIGFPY--SLGEAAWSTAGDQPM 84
EPY Q N Q NSY P Y P A ++ P + G A + AG +P
Sbjct: 193 EPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPP 252
Query: 85 PYLTTYGQMSNGEHHYIPDGVFSQPG---ALGNTP-----PFLGQ--------HGFNFFP 128
P + S+ G G A G TP P L Q G+ +P
Sbjct: 253 PSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYP 312
Query: 129 GNADFSTWGTSGSQGQ-------------STQSSAYSSSYGYPPSSLGRAITDGQAGFGN 175
G D+S G G+ + ++A ++S G S ++ G +G G
Sbjct: 313 GG-DYSGGPQDGGAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGG 371
Query: 176 DTLSKVPGISSIEQGMTGLK---IGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAA 232
L++ P SS M ++ GG T ++ G SG P S
Sbjct: 372 QPLARTPQPSSPMDQMGKMRPQPYGG--TNPYSQQQGPP---SGPQQGHGYPGQPYGSQT 426
Query: 233 PKPTSWAAIARKPAKP-----QPKLKPKGNVGIGGSAVP-PPPIKHNMNIGTWDEKGSVV 286
P+ R + ++ P G G G P + + ++
Sbjct: 427 PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYS 486
Query: 287 KAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGP------------ 334
+ PP+Q + QQPQ QPP L SQ P Q QP QP QQ P
Sbjct: 487 QQPPSQTPHAQPSYQQQPQS--QPPQLQSSQPPYSQ-QPSQPPHQQSPAPYPSQQSTTQQ 543
Query: 335 QPQAQPHQVQPQQQ 348
PQ+QP QPQ Q
Sbjct: 544 HPQSQPPYSQPQAQ 557
Score = 38.1 bits (87), Expect = 0.023
Identities = 79/363 (21%), Positives = 114/363 (31%), Gaps = 70/363 (19%)
Query: 37 PYLSSQTNQSNSYPPMSDPY-MPSYYAPSIGFPYSL--GEAAWSTAGDQP------MPYL 87
P+ Q + PP P+ PSY P L + +S QP PY
Sbjct: 476 PHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYP 535
Query: 88 TTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLGQHGFNFFPGNADFSTWGTSGSQGQSTQ 147
+ Q S + H +SQP A P+ Q P Q Q +Q
Sbjct: 536 S---QQSTTQQHPQSQPPYSQPQAQS---PYQQQQPQQPAPSTLSQQA-AYPQPQSQQSQ 588
Query: 148 SSAYSSSYGYPPSSLGRAITDGQAGFGNDTLSKVPGISSIEQGMTGLKIG---------- 197
+AYS PP L Q FG+ S P ++S + G + +
Sbjct: 589 QTAYSQQRFPPPQEL------SQDSFGSQA-SSAPSMTSSKGGQEDMNLSLQSRPSSLPD 641
Query: 198 -----GDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAIARKPAKPQPKL 252
DL + +S+SG++S P S TS + P P
Sbjct: 642 LSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVG 701
Query: 253 KPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPP 312
P + P + N + PP P +I+ P
Sbjct: 702 SPASVAQSRSGPLSPAAVPGN-------------QMPPRPPSGQSDSIMH--------PS 740
Query: 313 LVQSQLPQQQ---PQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNG 369
+ QS + Q + + PQ Q PQP + QP Q+ + G G Q N
Sbjct: 741 MNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSGGQI--------HTGMGSYQQNS 792
Query: 370 AGS 372
GS
Sbjct: 793 MGS 795
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 52.4 bits (124), Expect = 1e-06
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAV--PPPPIKHNMNIGTWDEKG 283
PP P P + P P KP+G GG+ PPPP K D K
Sbjct: 176 PPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS 232
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQ--QQPQ-PPQPQQQQGPQPQ 337
++PP +P PP QPQ PP Q PQ +PQ PP P + QGP PQ
Sbjct: 233 QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 289
Score = 51.2 bits (121), Expect = 3e-06
Identities = 41/117 (35%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAV--PPPPIKHNMNIGTWDEKG 283
PP P P + P P KP+G GG+ PPPP K D K
Sbjct: 114 PPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKS 170
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQ--QQPQ-PPQPQQQQGPQPQ 337
++PP +P PP QPQ PP Q PQ +PQ PP P + QGP PQ
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 227
Score = 48.9 bits (115), Expect = 1e-05
Identities = 45/149 (30%), Positives = 56/149 (37%), Gaps = 17/149 (11%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAV--PPPPIKHNMNIGTWDEKG 283
PP P P + P P KP+G GG+ PPPP K K
Sbjct: 238 PPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 294
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQ---QQQGPQPQAQP 340
++PP +P PP QPQ PPP P +PQ P PQ + QGP P +P
Sbjct: 295 RSSRSPPGKPQGPPPQGGNQPQ---GPPP------PPGKPQGPPPQGGNKPQGPPPPGKP 345
Query: 341 HQVQPQQQQLQNRWVAPRNRGAGFNQNNG 369
PQ +P + G Q G
Sbjct: 346 QGPPPQGGSKSRSARSPPGKPQGPPQQEG 374
Score = 47.0 bits (110), Expect = 5e-05
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAV--PPPPIKHNMNIGTWDEKG 283
PP P P + P P KP+G GG+ PPPP K D+
Sbjct: 53 PPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR 109
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQ--QQPQ-PPQPQQQQGPQPQ 337
S ++PP +P PP QPQ PP Q PQ +PQ PP P + QGP PQ
Sbjct: 110 SP-RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ 165
Score = 45.8 bits (107), Expect = 1e-04
Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAV--PPPPIKHNMNIGTWDEKG 283
PP P P + P P KP+G GG+ PPPP K K
Sbjct: 300 PPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKS 356
Query: 284 SVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQV 343
++PP +P PPQ PQ PPP PQQ PP Q Q P+P
Sbjct: 357 RSARSPPGKPQGPPQQEGNNPQG---PPPPAGGN-PQQPQAPPAGQPQGPPRPPQGGRPS 412
Query: 344 QPQQ 347
+P Q
Sbjct: 413 RPPQ 416
Score = 38.1 bits (87), Expect = 0.023
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 248 PQPKLKPKGNVGIGGS---AVPPPPIKHNMNIGTWDEKGSVVKAPPT--QPVLPPQTIIQ 302
P P KP+G GG+ PPPP K G + G+ + PP +P PP +
Sbjct: 51 PSPPGKPQGPPPQGGNQPQGPPPPPGKPQ---GPPPQGGNKPQGPPPPGKPQGPPPQGDK 107
Query: 303 QPQPLIQP-----PPLVQSQLPQQQPQPP----QPQQQQGPQPQAQPHQVQPQ 346
P P PP PQ P PP P Q G +PQ P +PQ
Sbjct: 108 SRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 160
Score = 37.7 bits (86), Expect = 0.030
Identities = 41/141 (29%), Positives = 48/141 (34%), Gaps = 24/141 (17%)
Query: 226 PPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGS---AVPPPPIKHNMNIGTWDEK 282
PP P P KP P P KP+G GGS + PP K +
Sbjct: 259 PPGKPQGPPPQG----GNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQ 314
Query: 283 GSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQ--------------PQPPQP 328
PP +P PP +PQ PPP + Q P Q PQ P
Sbjct: 315 PQGPPPPPGKPQGPPPQGGNKPQG---PPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ 371
Query: 329 QQQQGPQPQAQPHQVQPQQQQ 349
Q+ PQ P PQQ Q
Sbjct: 372 QEGNNPQGPPPPAGGNPQQPQ 392
Score = 36.6 bits (83), Expect = 0.066
Identities = 39/140 (27%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 220 IATNSVPPVSSAAPKPTSWAAIARKP--AKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIG 277
+A +S ++ + S + IA P A PQ KP+G G PPP N G
Sbjct: 11 LALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQG 70
Query: 278 TWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQ 337
PP +P PP +PQ PP P +PQ P PQ + P+
Sbjct: 71 P--------PPPPGKPQGPPPQGGNKPQG----PP------PPGKPQGPPPQGDKSRSPR 112
Query: 338 AQPHQVQPQQQQLQNRWVAP 357
+ P + Q Q N+ P
Sbjct: 113 SPPGKPQGPPPQGGNQPQGP 132
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 51.6 bits (122), Expect = 2e-06
Identities = 43/114 (37%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 288 APPTQPVLPPQTIIQQPQ-------PLIQPPPLVQSQLPQQQPQPPQPQQ-QQGPQPQAQ 339
APPTQ VLPPQ +Q PQ P Q P Q P P PQ+ QQ PQP Q
Sbjct: 497 APPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQ 556
Query: 340 P--HQVQPQQQQLQNRWV----APRNRGAGFNQNNGAGSENFGLGVVPVSASPS 387
P + P QQQ + + P+N+G +Q + G + GL VV + PS
Sbjct: 557 PGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL-VVQYTPLPS 609
Score = 30.0 bits (66), Expect = 6.2
Identities = 33/123 (26%), Positives = 41/123 (33%), Gaps = 30/123 (24%)
Query: 244 KPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQ 303
+P QP L P GG P+ ++M PP Q Q
Sbjct: 623 QPPFQQPMLVPVSQSVQGGLPAAGVPVYYSM-------------IPPAQ-----QNGTSP 664
Query: 304 PQPLIQPPPLVQSQLPQQQP--QPPQ-PQQQQGPQPQAQ---------PHQVQPQQQQLQ 351
+QPP Q Q+PQ PPQ PQQ G P P+ QP Q
Sbjct: 665 SVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSM 724
Query: 352 NRW 354
+W
Sbjct: 725 VQW 727
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 51.2 bits (121), Expect = 3e-06
Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 270 IKHNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQ-LPQQQPQPP-- 326
I ++N G + S + + +L P Q PQP PPP SQ P QQPQPP
Sbjct: 509 ISSSLNEGVVSYESSSINGRKSGVMLDPLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQL 568
Query: 327 QPQQQQGPQPQAQPHQVQPQQQQLQ 351
QP Q PQPQ QP Q Q Q
Sbjct: 569 QPPHQVPPQPQTQPPPTQQPQPPTQ 593
Score = 39.7 bits (91), Expect = 0.008
Identities = 26/54 (48%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 289 PPTQPVLPPQTIIQQPQPL-IQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPH 341
PP P PQ + QQPQP +QPP V PQ Q QPP QQ Q P A H
Sbjct: 549 PPPPPPSQPQPL-QQPQPPQLQPPHQVP---PQPQTQPPPTQQPQPPTQAAPLH 598
>gi|83977459 pleckstrin homology-like domain, family A, member 1
[Homo sapiens]
Length = 401
Score = 51.2 bits (121), Expect = 3e-06
Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 285 VVKAPPTQPVLPPQTIIQQPQPLIQPPPLVQSQLPQQQPQP-PQPQQQQGPQPQAQPH 341
V + PP+QP PQ + QPQP QP P QSQ PQ QPQP PQPQQ P P PH
Sbjct: 303 VQQQPPSQPQPQPQ-LQPQPQPQPQPQPQPQSQ-PQPQPQPKPQPQQLH-PYPHPHPH 357
Score = 48.1 bits (113), Expect = 2e-05
Identities = 31/63 (49%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 292 QPVLPPQTIIQQPQPLIQPPPLVQSQ-LPQQQPQPPQPQQQQGPQPQAQPH---QVQPQQ 347
Q +L ++ Q+ Q L+Q P Q Q PQ QPQ PQPQ Q PQPQ+QP Q +PQ
Sbjct: 287 QAILAVKSTRQKQQHLVQQQPPSQPQPQPQLQPQ-PQPQPQPQPQPQSQPQPQPQPKPQP 345
Query: 348 QQL 350
QQL
Sbjct: 346 QQL 348
Score = 32.7 bits (73), Expect = 0.95
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 300 IIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQ--QGPQPQAQP 340
I+ + L+ PP +Q Q QQQ Q Q QQQ QGP +QP
Sbjct: 173 ILTEEGLLLIPPKQLQHQQQQQQQQQQQQQQQPGQGPAEPSQP 215
>gi|116805348 trinucleotide repeat containing 6A [Homo sapiens]
Length = 1962
Score = 50.8 bits (120), Expect = 3e-06
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 315 QSQLPQQQPQPPQPQQQQGPQPQAQPHQVQPQQQQLQNRWVAPRNRGAGFNQNNGAGSEN 374
Q Q QQQPQ QPQQQ PQPQ Q Q QPQ R V PR R Q G
Sbjct: 96 QQQQQQQQPQQQQPQQQPQPQPQQQQPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQH- 154
Query: 375 FGLGVVPVSAS--PSSVEVHPVLEKLKAINNYNPKDFDWNLKNGRVFIIKSYSEDDIHRS 432
PV A+ S+V+V + A+ N P++ NG V S ++ DI+ S
Sbjct: 155 -----FPVIAANLGSAVKVLNSQSESSALTNQQPQN------NGEV--QNSKNQSDINHS 201
Query: 433 IKYSIWCSTEHG 444
S + +++ G
Sbjct: 202 TSGSHYENSQRG 213
Score = 34.7 bits (78), Expect = 0.25
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 302 QQPQPLIQPPPLVQSQLPQQQPQP-PQPQQQQGPQPQAQPHQ 342
QQ QP QP P Q Q PQQQPQ P+ ++ P+ + Q H+
Sbjct: 105 QQQQPQQQPQPQPQQQQPQQQPQALPRYPREVPPRFRHQEHK 146
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 50.1 bits (118), Expect = 6e-06
Identities = 49/141 (34%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 218 TSIATNSVPPVSSAAPKP----TSWAAIARKPAKPQPKLKPKGNVGIGG--SAVPPPPIK 271
TSIA P P P A RK A QP + G+ G ++VP P
Sbjct: 362 TSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQAAGSSNQPGLLASVPQPK-- 419
Query: 272 HNMNIGTWDEKGSVVKAPPTQPVLPPQTIIQQPQ--PLIQPPPLVQSQ-LPQQQPQPPQP 328
+APP+QP+ PQT +QPQ P Q P Q+Q LP Q PQ
Sbjct: 420 --------------PQAPPSQPL--PQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQH 463
Query: 329 QQQQGPQPQAQPHQVQPQQQQ 349
QQQ + Q Q Q P QQQ
Sbjct: 464 QQQLFLKQQQQQQQPPPAQQQ 484
Score = 34.7 bits (78), Expect = 0.25
Identities = 50/194 (25%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 182 PGISSIEQGMTGLKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWAAI 241
PGI I+ +T K A + A SS + + P A P
Sbjct: 379 PGILPIQPALTPRK------RATVQPPPQAAGSSNQPGLLASVPQPKPQAPPSQPLPQTQ 432
Query: 242 ARKP-AKPQPKLKPKGNV-GIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQT 299
A++P A P P+ P G+ A P + + + ++ + PP P T
Sbjct: 433 AKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQQQQ----QQPPPAQQQPAGT 488
Query: 300 IIQQPQ----------PLIQPP-----PLVQSQLPQQQPQPPQPQQQQGPQPQAQPHQVQ 344
QQ Q P Q P P+V QQQ QQQQ Q Q Q Q+
Sbjct: 489 FYQQQQAQTQQFQAVHPATQQPAIAQFPVVSQGGSQQQLMQNFYQQQQQQQQQQQQQQLA 548
Query: 345 P--QQQQLQNRWVA 356
QQQL + A
Sbjct: 549 TALHQQQLMTQQAA 562
Score = 32.0 bits (71), Expect = 1.6
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 295 LPPQTIIQQPQPLIQPPPLVQSQLPQQQP-QPPQPQQQQGPQPQAQPHQVQPQQQ 348
L Q ++ Q L Q P + Q PQ QP PQP Q P QA P + QP+ Q
Sbjct: 551 LHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQPAPAQEPAIQA-PVRQQPKVQ 604
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 49.3 bits (116), Expect = 1e-05
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 24/168 (14%)
Query: 232 APKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPT 291
+P+ + + A P P P P PPPP+ + T S P +
Sbjct: 577 SPQQSGYIMTAAPPPHPPPPPPPPP---------PPPPLPPGQPVPTAGYPAS--GHPVS 625
Query: 292 QPVLPPQTIIQQPQPLIQ----PPPLVQSQLPQQQPQPPQPQQQQGPQPQAQP-----HQ 342
QPVL Q IQQP P + P S PQ +P P QP QP +Q
Sbjct: 626 QPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQTGYQ 685
Query: 343 VQPQQQQLQNRWVA---PRNRGAGFNQNNGAGSENFGLGVVPVSASPS 387
V P QQQ V P+++ Q N G++ G+ V+P ++ P+
Sbjct: 686 VIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGV-VIPYTSVPT 732
Score = 38.5 bits (88), Expect = 0.017
Identities = 55/226 (24%), Positives = 81/226 (35%), Gaps = 29/226 (12%)
Query: 127 FPGNADFSTWGTSGSQGQSTQSSAYSSSYGYPPSSLGRAITDGQAGFGN-----DTLSKV 181
F N D S T+ Q + YS P SS TD + N S
Sbjct: 330 FRVNKDASGRSTNSHQSSTENELKYSEPR--PWSS-----TDSDSSLRNLKPAVTKASSF 382
Query: 182 PGISSIEQGMTG--LKIGGDLTAAVTKTVGTALSSSGMTSIATNSVPPVSSAAPKPTSWA 239
GIS + +G + K G L+ +++ G+ SS+G S +P +A + + A
Sbjct: 383 SGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLP--GTALSQSSHGA 440
Query: 240 AIARKPAKPQPKLKPKGNVGIGGSAVPPPPIKHNMNIGTWDEKGSVVKAPPTQPVLPPQT 299
+ L G G+ G P + + PP ++ PQT
Sbjct: 441 PVVYPTVSTHSSLSFDG--GLNGQVASPSTSFFLLPL-------EAAGIPPGSILINPQT 491
Query: 300 ----IIQQPQPLIQPPPLVQSQLPQQQPQPPQPQQQQGPQPQAQPH 341
I P++ PP+ Q + Q P PPQP PQ A H
Sbjct: 492 GQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAANH 537
>gi|55741675 hypothetical protein LOC22889 [Homo sapiens]
Length = 614
Score = 49.3 bits (116), Expect = 1e-05
Identities = 55/186 (29%), Positives = 68/186 (36%), Gaps = 27/186 (14%)
Query: 225 VPPVSSAAPKPTSWAAIARKPAKPQPKLKPKGNVGIGGSAVPPP--PIKHNMNIGTWDEK 282
V +++A P P A PQP P G VPPP P++ + +
Sbjct: 327 VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPS-IVP 385
Query: 283 GSVVKAPPTQPVLP---PQTIIQQPQPLIQPPPLVQSQLPQQQP----QPPQPQQQQGPQ 335
+V AP P LP P Q P +QPP Q P P P + GPQ
Sbjct: 386 PAVSLAPGVLPALPTGVPPVPTQYPITQVQPPAST-GQSPMGGPFIPAAPVKTALPAGPQ 444
Query: 336 PQAQPHQVQPQQQQLQNRWVA---PRNRGAGF-----------NQNNGAGSEN--FGLGV 379
PQ QP P Q Q Q R P R +G N G S+N G G
Sbjct: 445 PQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGS 504
Query: 380 VPVSAS 385
P S+S
Sbjct: 505 KPASSS 510
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,063,394
Number of Sequences: 37866
Number of extensions: 1686851
Number of successful extensions: 17750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 718
Number of HSP's that attempted gapping in prelim test: 8283
Number of HSP's gapped (non-prelim): 5244
length of query: 585
length of database: 18,247,518
effective HSP length: 108
effective length of query: 477
effective length of database: 14,157,990
effective search space: 6753361230
effective search space used: 6753361230
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.