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Search of human proteins with 239741286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741286 PREDICTED: hypothetical protein [Homo sapiens]
(268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741286 PREDICTED: hypothetical protein [Homo sapiens] 564 e-161
gi|169161400 PREDICTED: hypothetical protein [Homo sapiens] 561 e-160
gi|113411427 PREDICTED: hypothetical protein [Homo sapiens] 548 e-156
gi|239741283 PREDICTED: hypothetical protein XP_002344484 [Homo ... 540 e-154
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 4e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 4e-04
gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens] 39 0.005
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens] 39 0.005
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo ... 39 0.006
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 39 0.006
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 39 0.006
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 38 0.011
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 38 0.011
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 38 0.011
gi|112421108 capicua homolog [Homo sapiens] 38 0.011
gi|4503765 fragile X mental retardation 1 [Homo sapiens] 37 0.018
gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 37 0.018
gi|110611246 xylosyltransferase II [Homo sapiens] 37 0.024
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 37 0.024
gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens] 37 0.024
gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens] 37 0.024
gi|239743861 PREDICTED: hypothetical protein XP_002342981 [Homo ... 37 0.024
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.024
gi|148806874 hypothetical protein LOC54754 [Homo sapiens] 37 0.024
>gi|239741286 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 564 bits (1454), Expect = e-161
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|169161400 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 561 bits (1446), Expect = e-160
Identities = 267/268 (99%), Positives = 267/268 (99%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGT EACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|113411427 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 548 bits (1411), Expect = e-156
Identities = 262/268 (97%), Positives = 262/268 (97%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFP RGGRKQPQPGSRQRKQNPISL GEQNGRKAT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLLGEQNGRKAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGT EACLQA GTT GWKYHALPLRLDPRSGHAGSALKAGSC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQALGTTWGWKYHALPLRLDPRSGHAGSALKAGSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGA G
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGALG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|239741283 PREDICTED: hypothetical protein XP_002344484 [Homo
sapiens]
Length = 268
Score = 540 bits (1391), Expect = e-154
Identities = 257/268 (95%), Positives = 259/268 (96%)
Query: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT 60
MRRAPDWVQRQAAPGSKCRVPWQRREFP RGGRKQPQPGSRQRKQNPISLPGEQNGR AT
Sbjct: 1 MRRAPDWVQRQAAPGSKCRVPWQRREFPGRGGRKQPQPGSRQRKQNPISLPGEQNGRTAT 60
Query: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPP 120
PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQ SRLHSRPPP
Sbjct: 61 PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQGSRLHSRPPP 120
Query: 121 LSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSC 180
LSPLRKPGGSNQPRSAAAAGT EACLQASGTTRGWKYHALPLRLDPRSGH+GSA KA SC
Sbjct: 121 LSPLRKPGGSNQPRSAAAAGTQEACLQASGTTRGWKYHALPLRLDPRSGHSGSAFKASSC 180
Query: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARG 240
PRLGGGGRGRGEAGAPSRFWLPRSLQQL PNEPRNADVQTLHPTPSHTRRG+RT KGA G
Sbjct: 181 PRLGGGGRGRGEAGAPSRFWLPRSLQQLSPNEPRNADVQTLHPTPSHTRRGRRTEKGALG 240
Query: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
PRFWKSKNSPANRQSSALDFWITTSISF
Sbjct: 241 PRFWKSKNSPANRQSSALDFWITTSISF 268
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.5 bits (101), Expect = 2e-04
Identities = 66/241 (27%), Positives = 88/241 (36%), Gaps = 57/241 (23%)
Query: 30 RGGRKQPQPGSRQRKQNPISLPGEQNGRKA-----TPQAGALGALGIRGIPSLCQSEGTR 84
R G +PGS + S P + KA TP A + R PS S+G
Sbjct: 320 RSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPS---SQG-- 374
Query: 85 WSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEA 144
RG R A GAGR R +R R SR +P R+ G +PR A G+ +
Sbjct: 375 ---RGGRAAG-------GAGRRRRRRRRRRRSRSSASAPRRR--GRRRPRPAPPRGSSRS 422
Query: 145 CLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRS 204
+A R SG A G P G RG G G ++
Sbjct: 423 LSRA--------------RSSSDSGSGRGAPGPGPEP---GSERGHGGHGKRAK------ 459
Query: 205 LQQLLPNEPRNADVQTLHPTP-SHTRRGQRTGKGARG-----PRFWKSKNSPANRQSSAL 258
P A + P+P +H RRG GK + PR W S SP+ +S +
Sbjct: 460 ------ERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSA 513
Query: 259 D 259
+
Sbjct: 514 E 514
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.7 bits (99), Expect = 3e-04
Identities = 55/227 (24%), Positives = 83/227 (36%), Gaps = 19/227 (8%)
Query: 14 PGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIR- 72
P S R R P GR + P ++ P+S PG +G T + G LG G+R
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASG---TTRPGPLGQKGLRI 127
Query: 73 -GIPSLCQSEGTRWSRR------GRRWAERCPPGVLGAGRSLRAQRSRLH---SRPPPLS 122
++ + + T +R RR PG + R++ + RP P +
Sbjct: 128 SAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSA 187
Query: 123 PLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPR 182
R P + PR + ++ + + + S R L+ + SA S R
Sbjct: 188 RPRPP--TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPAR 245
Query: 183 LGGGGRGRGEAGAPSRFWLPRSLQQLLPNE---PRNADVQTLHPTPS 226
G RG A A P+ LQ L P + PR L P S
Sbjct: 246 SGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 292
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.4 bits (98), Expect = 4e-04
Identities = 55/226 (24%), Positives = 84/226 (37%), Gaps = 22/226 (9%)
Query: 15 GSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIR-- 72
G+ R P R P GR + P ++ P+S PG +G T + G LG G+R
Sbjct: 84 GTSSRNPASR---PPASGRGERAPPAKNTSPGPVSSPGRASG---TTRPGPLGQKGLRIS 137
Query: 73 GIPSLCQSEGTRWSRR------GRRWAERCPPGVLGAGRSLRAQRSRLH---SRPPPLSP 123
++ + + T +R RR PG + R++ + RP P +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 124 LRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRL 183
R P + PR + ++ + + + S R L+ + SA S R
Sbjct: 198 PRPP--TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 184 GGGGRGRGEAGAPSRFWLPRSLQQLLPNE---PRNADVQTLHPTPS 226
G RG A A P+ LQ L P + PR L P S
Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.4 bits (98), Expect = 4e-04
Identities = 55/226 (24%), Positives = 84/226 (37%), Gaps = 22/226 (9%)
Query: 15 GSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIR-- 72
G+ R P R P GR + P ++ P+S PG +G T + G LG G+R
Sbjct: 84 GTSSRNPASR---PPASGRGERAPPAKNTSPGPVSSPGRASG---TTRPGPLGQKGLRIS 137
Query: 73 GIPSLCQSEGTRWSRR------GRRWAERCPPGVLGAGRSLRAQRSRLH---SRPPPLSP 123
++ + + T +R RR PG + R++ + RP P +
Sbjct: 138 AEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSAR 197
Query: 124 LRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRL 183
R P + PR + ++ + + + S R L+ + SA S R
Sbjct: 198 PRPP--TEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 255
Query: 184 GGGGRGRGEAGAPSRFWLPRSLQQLLPNE---PRNADVQTLHPTPS 226
G RG A A P+ LQ L P + PR L P S
Sbjct: 256 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
>gi|239756566 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 39.3 bits (90), Expect = 0.004
Identities = 56/220 (25%), Positives = 84/220 (38%), Gaps = 44/220 (20%)
Query: 28 PSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSR 87
PSRG P+PG++ RK+ L E G++ SL ++G
Sbjct: 2 PSRG----PRPGAQDRKR---FLKWEPAGKRGQ---------------SLRLAKGCSPLN 39
Query: 88 RGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQ 147
+G+ + P + + ++ + PP +R G N P A +AC
Sbjct: 40 KGQMFQTLMLPAFMNWPSEISKKKMGI----PPTRAIRMQGIRNTPGGDPKA---QACFP 92
Query: 148 ASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQ 207
S R ++ +L L +G S +A C R GGGGR A A + PR
Sbjct: 93 TSAANRSFQPRSLGGSLAGIAGPRPSPCQAHDCER-GGGGRPSHRAAAVDQ-GRPR---- 146
Query: 208 LLPNEPRNADVQTLHPTPSHTRRGQRT-------GKGARG 240
P PR + LHP+ + G R G+GA G
Sbjct: 147 --PRVPRGQPLPGLHPSAAAPGVGGRASGAGGLLGEGAAG 184
>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 38.9 bits (89), Expect = 0.005
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 30 RGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRG 89
RG R+Q Q GSR R ++ G +N R+ + R S SE RW R G
Sbjct: 15 RGRRRQSQSGSRSRSRSH----GRRNRRRREDEGRRRRRRRSRERRS--DSEEERWQRSG 68
Query: 90 RR--------WAERCPPGVLGAGR-------SLRAQRSRLHSRPPPLSPLRKPGGSNQPR 134
R W R +G + R +R+R S S PG S PR
Sbjct: 69 MRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
Query: 135 SAAAAGTHEACLQ 147
+AAAA + + LQ
Sbjct: 129 AAAAALSQQQSLQ 141
>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
Length = 758
Score = 38.9 bits (89), Expect = 0.005
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 30 RGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRG 89
RG R+Q Q GSR R ++ G +N R+ + R S SE RW R G
Sbjct: 15 RGRRRQSQSGSRSRSRSH----GRRNRRRREDEGRRRRRRRSRERRS--DSEEERWQRSG 68
Query: 90 RR--------WAERCPPGVLGAGR-------SLRAQRSRLHSRPPPLSPLRKPGGSNQPR 134
R W R +G + R +R+R S S PG S PR
Sbjct: 69 MRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPR 128
Query: 135 SAAAAGTHEACLQ 147
+AAAA + + LQ
Sbjct: 129 AAAAALSQQQSLQ 141
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.006
Identities = 62/236 (26%), Positives = 83/236 (35%), Gaps = 39/236 (16%)
Query: 19 RVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGI-RG---- 73
R W R PSR GSR+ + + P E +G K AGA L RG
Sbjct: 204 RAGWATRRAPSRRRNFGAPRGSRRLRPDAGKFP-EASGGKGQRAAGAERVLNNGRGPRSR 262
Query: 74 IPSLCQS-EGTRWSR-RGRRWAERCPPGVLGAGRSLRAQRSRLH--------SRPPPLSP 123
+P L E WSR R R P V +G R R + H PP L+
Sbjct: 263 LPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLAR 322
Query: 124 L----RKPGGSNQP--------------RSAAAAGTHEACLQASGTTRGWKYHALPLRLD 165
R PGG+ +P RS GT +A + R A P R
Sbjct: 323 AAARRRGPGGATEPGFVTLAFRSRLPLLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPR 382
Query: 166 PRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL 221
P K G G E P+ + ++LL +EPRN ++++
Sbjct: 383 PSQRPVSGLFKVKFFVPQSGPGSSACEVAVPT-----TAGRELLGSEPRNGTLESI 433
>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
Length = 650
Score = 38.5 bits (88), Expect = 0.006
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 34/219 (15%)
Query: 49 SLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLR 108
S G + GR A AG RG+ + + G + GRR R G+GR +
Sbjct: 36 SFQGSKRGRLA---AG-------RGLGAKVRVVGRPGNSGGRR---RAGNRAWGSGRRGK 82
Query: 109 AQRSRLHSRPPPLSPLRKPGGSNQPR--SAAAAGTHEACLQASGTTRGW----KYHALPL 162
++RSR P P GS PR SA + G + W + L
Sbjct: 83 SRRSR--------GPGPWPAGSGGPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFL 134
Query: 163 RLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL- 221
+L G L G GG G G G AGA S S + L ++ ++D +
Sbjct: 135 KLSSSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAE 194
Query: 222 ----HPTPSHTRR--GQRTGKGARGPRFWKSKNSPANRQ 254
P P+ +RR G+ G RG R + K P++++
Sbjct: 195 GARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQR 233
>gi|239749594 PREDICTED: hypothetical protein XP_002347096 [Homo
sapiens]
Length = 201
Score = 38.5 bits (88), Expect = 0.006
Identities = 40/114 (35%), Positives = 49/114 (42%), Gaps = 26/114 (22%)
Query: 97 PPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWK 156
PPG A R R ++ R H L+P+R + +A A A L A+ + RG
Sbjct: 41 PPGPSKAARRGRGEQVRTH-----LAPVRVLPNTAAEATAKRAPVPSAPLPAARSPRG-- 93
Query: 157 YHALPLRLDPRS-------GHAG------SALKAGSCPRLGGGGRGRGEAGAPS 197
P L PRS G G S L AG P LG GG GRG GAP+
Sbjct: 94 ----PQPLSPRSSWVRGMPGRGGHQRPLFSTLGAGFQPPLGRGGAGRG--GAPA 141
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.006
Identities = 62/236 (26%), Positives = 83/236 (35%), Gaps = 39/236 (16%)
Query: 19 RVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGAL----GIRG- 73
R W R PSR GSR+ + + P E +G K AGA L G R
Sbjct: 204 RAGWATRRAPSRRRNFGAPRGSRRLRPDAGKFP-EASGGKGQRAAGAERVLDNGRGPRSR 262
Query: 74 IPSLCQS-EGTRWSR-RGRRWAERCPPGVLGAGRSLRAQRSRLH--------SRPPPLSP 123
+P L E WSR R R P V +G R R + H PP L+
Sbjct: 263 LPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLAR 322
Query: 124 L----RKPGGSNQP--------------RSAAAAGTHEACLQASGTTRGWKYHALPLRLD 165
R PGG+ +P RS GT +A + R A P R
Sbjct: 323 AAARRRGPGGATEPGFVTLAFRSRLPLLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPR 382
Query: 166 PRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL 221
P K G G E P+ + ++LL +EPRN ++++
Sbjct: 383 PSQRPVSGLFKVKFFVPQSGPGSSACEVAVPT-----TAGRELLGSEPRNGTLESI 433
>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
sapiens]
Length = 725
Score = 38.5 bits (88), Expect = 0.006
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 34/219 (15%)
Query: 49 SLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLR 108
S G + GR A AG RG+ + + G + GRR R G+GR +
Sbjct: 36 SFQGSKRGRLA---AG-------RGLGAKVRVVGRPGNSGGRR---RAGNRAWGSGRRGK 82
Query: 109 AQRSRLHSRPPPLSPLRKPGGSNQPR--SAAAAGTHEACLQASGTTRGW----KYHALPL 162
++RSR P P GS PR SA + G + W + L
Sbjct: 83 SRRSR--------GPGPWPAGSGGPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFL 134
Query: 163 RLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL- 221
+L G L G GG G G G AGA S S + L ++ ++D +
Sbjct: 135 KLSSSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSSERVELQSDTDDSDTRVAE 194
Query: 222 ----HPTPSHTRR--GQRTGKGARGPRFWKSKNSPANRQ 254
P P+ +RR G+ G RG R + K P++++
Sbjct: 195 GARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQR 233
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 38.5 bits (88), Expect = 0.006
Identities = 62/236 (26%), Positives = 83/236 (35%), Gaps = 39/236 (16%)
Query: 19 RVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGAL----GIRG- 73
R W R PSR GSR+ + + P E +G K AGA L G R
Sbjct: 204 RAGWATRRAPSRRRNFGAPRGSRRLRPDAGKFP-EASGGKGQRAAGAERVLDNGRGPRSR 262
Query: 74 IPSLCQS-EGTRWSR-RGRRWAERCPPGVLGAGRSLRAQRSRLH--------SRPPPLSP 123
+P L E WSR R R P V +G R R + H PP L+
Sbjct: 263 LPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSGSWARPCREQGHPAVLALQSPAPPSLAR 322
Query: 124 L----RKPGGSNQP--------------RSAAAAGTHEACLQASGTTRGWKYHALPLRLD 165
R PGG+ +P RS GT +A + R A P R
Sbjct: 323 AAARRRGPGGATEPGFVTLAFRSRLPLLRSPGPEGTSDAARAPAPGLRDRDLRAAPPRPR 382
Query: 166 PRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTL 221
P K G G E P+ + ++LL +EPRN ++++
Sbjct: 383 PSQRPVSGLFKVKFFVPQSGPGSSACEVAVPT-----TAGRELLGSEPRNGTLESI 433
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 37.7 bits (86), Expect = 0.011
Identities = 54/195 (27%), Positives = 65/195 (33%), Gaps = 50/195 (25%)
Query: 17 KCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPS 76
K R+ R+ PSR + P P + P Q G P+A A
Sbjct: 162 KARMERASRKLPSRVNSRPPHPAPTR------PTPRVQGGFGREPRAAA----------- 204
Query: 77 LCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSA 136
+GR W C + +G R R PP L R G P SA
Sbjct: 205 ----------GQGRGWLPPCRLRLQDSG-----PRRRPGPGPPALRSGRSRGSGRPPDSA 249
Query: 137 AAAGTHEACLQASGTTRGW-------KYHALPLR-LDPRSGHAGSAL--------KAGSC 180
AAGT + A+ RGW ALP L PR G + L G
Sbjct: 250 GAAGTGGSGWAAA--LRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAGGSDTGHL 307
Query: 181 PRLGGGGRGRGEAGA 195
P GGRG GE A
Sbjct: 308 PLGNEGGRGEGEGEA 322
Score = 32.7 bits (73), Expect = 0.34
Identities = 58/240 (24%), Positives = 82/240 (34%), Gaps = 47/240 (19%)
Query: 28 PSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWS- 86
P G P +R R + G +P AG + A P ++ T W+
Sbjct: 68 PKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPA----PTPPRARNAETPWNA 123
Query: 87 ----RRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTH 142
RG W L GR L A + R R PPL P + P++ +
Sbjct: 124 ASLLNRGCCWGA----AALLIGRLLGANQKR--QRMPPLPP-------SSPKARMERASR 170
Query: 143 EACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGG-GRGRGEAGAPSRFWL 201
+ LP R++ R H PR+ GG GR A R WL
Sbjct: 171 K----------------LPSRVNSRPPHPAPTRPT---PRVQGGFGREPRAAAGQGRGWL 211
Query: 202 PRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARGPRFWKSKNSPANRQSSALDFW 261
P +L + PR P P R G+ G G R P + + + ++AL W
Sbjct: 212 PPCRLRLQDSGPRRRP----GPGPPALRSGRSRGSG-RPPDSAGAAGTGGSGWAAALRGW 266
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 37.7 bits (86), Expect = 0.011
Identities = 54/195 (27%), Positives = 65/195 (33%), Gaps = 50/195 (25%)
Query: 17 KCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPS 76
K R+ R+ PSR + P P + P Q G P+A A
Sbjct: 162 KARMERASRKLPSRVNSRPPHPAPTR------PTPRVQGGFGREPRAAA----------- 204
Query: 77 LCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSA 136
+GR W C + +G R R PP L R G P SA
Sbjct: 205 ----------GQGRGWLPPCRLRLQDSG-----PRRRPGPGPPALRSGRSRGSGRPPDSA 249
Query: 137 AAAGTHEACLQASGTTRGW-------KYHALPLR-LDPRSGHAGSAL--------KAGSC 180
AAGT + A+ RGW ALP L PR G + L G
Sbjct: 250 GAAGTGGSGWAAA--LRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAGGSDTGHL 307
Query: 181 PRLGGGGRGRGEAGA 195
P GGRG GE A
Sbjct: 308 PLGNEGGRGEGEGEA 322
Score = 32.7 bits (73), Expect = 0.34
Identities = 58/240 (24%), Positives = 82/240 (34%), Gaps = 47/240 (19%)
Query: 28 PSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWS- 86
P G P +R R + G +P AG + A P ++ T W+
Sbjct: 68 PKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPA----PTPPRARNAETPWNA 123
Query: 87 ----RRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTH 142
RG W L GR L A + R R PPL P + P++ +
Sbjct: 124 ASLLNRGCCWGA----AALLIGRLLGANQKR--QRMPPLPP-------SSPKARMERASR 170
Query: 143 EACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGG-GRGRGEAGAPSRFWL 201
+ LP R++ R H PR+ GG GR A R WL
Sbjct: 171 K----------------LPSRVNSRPPHPAPTRPT---PRVQGGFGREPRAAAGQGRGWL 211
Query: 202 PRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARGPRFWKSKNSPANRQSSALDFW 261
P +L + PR P P R G+ G G R P + + + ++AL W
Sbjct: 212 PPCRLRLQDSGPRRRP----GPGPPALRSGRSRGSG-RPPDSAGAAGTGGSGWAAALRGW 266
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.011
Identities = 58/239 (24%), Positives = 83/239 (34%), Gaps = 35/239 (14%)
Query: 28 PSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSR 87
P + + QP G+ QR+ + S +Q G + + A S G R +
Sbjct: 35 PQQQPQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPT--------SRGHRTEK 86
Query: 88 RGRRWAERCPPGVLGAGRSLRAQRS-----------RLHSRPPPLSP-----LRKPGGSN 131
R + +R P G G R R+ S + P P S RKP
Sbjct: 87 RKPQQPQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKP---Q 143
Query: 132 QPRSAAAAGTHE----ACLQASGTTRGW--KYHALPLRLDPRSGHAGSALKAGS--CPRL 183
QP+ AAGT + C ++ R + A + SGH K C
Sbjct: 144 QPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPA 203
Query: 184 GGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARGPR 242
GG G+ RG +PSR + Q+ +AD Q + QR G G R
Sbjct: 204 GGTGQRRGSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAAQPQRRPAGGTGQR 262
Score = 31.2 bits (69), Expect = 0.99
Identities = 50/213 (23%), Positives = 77/213 (36%), Gaps = 28/213 (13%)
Query: 2 RRAPDWVQRQAAPGSKCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKAT- 60
+R P QR+ A G+ QRR SR Q G++ R++ + P + T
Sbjct: 86 KRKPQQPQRRPAGGTG-----QRRG--SRSSSSADQQGAQDREEEAAAAPAPTSSGHRTE 138
Query: 61 ------PQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRL 114
PQ G R S + ++ A P R+ + +R +L
Sbjct: 139 KRKPQQPQCRPAAGTGQRRGSGCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQL 198
Query: 115 HSRPPP---------LSPLRKP-GGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRL 164
+P SP R+P GG+ Q R + ++ + + Q R + A P R
Sbjct: 199 QCQPAGGTGQRRGSRSSPSRQPAGGTGQRRGSRSSPSAD---QQRAQDRE-EEAAQPQRR 254
Query: 165 DPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPS 197
A P GG G+ RG A AP+
Sbjct: 255 PAGGTGQRRGTAAAPVPTTGGTGQRRGTAAAPA 287
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 37.7 bits (86), Expect = 0.011
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 119 PPLSPLRKPGGSNQPRSAAA-AGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKA 177
PPLSP PG ++QP+ + T +Q++G HALPL P S AG+
Sbjct: 979 PPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGG------HALPLGTSPASSQAGTVTSY 1032
Query: 178 GSCPRLGGGGRGRGEAG 194
G + G G +G
Sbjct: 1033 GPTSSVALGFTSLGPSG 1049
Score = 28.9 bits (63), Expect = 4.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 119 PPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLR 163
P +P PGGS++ S AAG +A+GT + K PL+
Sbjct: 1295 PAPAPAVAPGGSSESSSGRAAGDTPERKEAAGTGKKVKVRPPPLK 1339
>gi|4503765 fragile X mental retardation 1 [Homo sapiens]
Length = 632
Score = 37.0 bits (84), Expect = 0.018
Identities = 45/168 (26%), Positives = 57/168 (33%), Gaps = 28/168 (16%)
Query: 102 GAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALP 161
G GR R R+R H R R PG ++ GT+ AS T +
Sbjct: 468 GMGRGSRPYRNRGHGR-------RGPGYTS--------GTNSEASNASETESDHRDELSD 512
Query: 162 LRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFW--LPRSLQQLLPNEPRNADVQ 219
L P S L+ G R GGGGRG+G G F S P PR A +
Sbjct: 513 WSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGR 572
Query: 220 TL-----------HPTPSHTRRGQRTGKGARGPRFWKSKNSPANRQSS 256
T + HT+ Q T R K +N + S
Sbjct: 573 TTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRNQKKEKPDS 620
>gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo
sapiens]
Length = 321
Score = 37.0 bits (84), Expect = 0.018
Identities = 53/192 (27%), Positives = 64/192 (33%), Gaps = 50/192 (26%)
Query: 17 KCRVPWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPS 76
K R+ R+ PSR + P P + P Q G P+A A
Sbjct: 162 KARMERASRKLPSRVNSRPPHPAPTR------PTPRVQGGFGREPRAAA----------- 204
Query: 77 LCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSA 136
+GR W C + +G R R PP L R G P SA
Sbjct: 205 ----------GQGRGWLPPCRLRLQDSG-----PRRRPGPGPPALRSGRSRGSGRPPDSA 249
Query: 137 AAAGTHEACLQASGTTRGW-------KYHALPLR-LDPRSGHAGSAL--------KAGSC 180
AAGT + A+ RGW ALP L PR G + L G
Sbjct: 250 GAAGTGGSGWAAA--LRGWPAPSSFAASSALPEECLPPRRGCGWAELLEREAGGSDTGHL 307
Query: 181 PRLGGGGRGRGE 192
P GGRG GE
Sbjct: 308 PLGNEGGRGEGE 319
Score = 32.7 bits (73), Expect = 0.34
Identities = 58/240 (24%), Positives = 82/240 (34%), Gaps = 47/240 (19%)
Query: 28 PSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWS- 86
P G P +R R + G +P AG + A P ++ T W+
Sbjct: 68 PKAGPSPSPAAPTRPRLLHGRRSAGHVARADVSPPAGPVPA----PTPPRARNAETPWNA 123
Query: 87 ----RRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTH 142
RG W L GR L A + R R PPL P + P++ +
Sbjct: 124 ASLLNRGCCWGA----AALLIGRLLGANQKR--QRMPPLPP-------SSPKARMERASR 170
Query: 143 EACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGG-GRGRGEAGAPSRFWL 201
+ LP R++ R H PR+ GG GR A R WL
Sbjct: 171 K----------------LPSRVNSRPPHPAPTRPT---PRVQGGFGREPRAAAGQGRGWL 211
Query: 202 PRSLQQLLPNEPRNADVQTLHPTPSHTRRGQRTGKGARGPRFWKSKNSPANRQSSALDFW 261
P +L + PR P P R G+ G G R P + + + ++AL W
Sbjct: 212 PPCRLRLQDSGPRRRP----GPGPPALRSGRSRGSG-RPPDSAGAAGTGGSGWAAALRGW 266
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 36.6 bits (83), Expect = 0.024
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 22/124 (17%)
Query: 29 SRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRR 88
S G ++ + G + R++ P L + + AG G+ G RR
Sbjct: 34 SFSGLEEDEAGEKGRQRKPRPLDPGEGSKDTDSSAGRRGSTG----------------RR 77
Query: 89 GRRWAERCPPGVLGAGRSLRA--QRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACL 146
RW R + + +RA R R R PP P PG N S AAAG EA +
Sbjct: 78 HGRWRGRAESPGVPVAKVVRAVTSRQRASRRVPPAPPPEAPGRQN--LSGAAAG--EALV 133
Query: 147 QASG 150
A+G
Sbjct: 134 GAAG 137
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 36.6 bits (83), Expect = 0.024
Identities = 36/124 (29%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 85 WSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLRKP--------GGSNQPRSA 136
W RR RR A PG+ AG + ++ P P S LR+P GG S
Sbjct: 106 WGRRSRRAAG---PGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSG 162
Query: 137 AAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAP 196
AGT ++R PL L P GS+ + C LG G G P
Sbjct: 163 PRAGTP----GGGRSSRAGARRKTPLSLCPLKLRKGSSRR---CQGLGSSWGGSGTPPPP 215
Query: 197 SRFW 200
W
Sbjct: 216 RALW 219
>gi|169205218 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 36.6 bits (83), Expect = 0.024
Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 51 PGEQNGRKATPQAGALGALGIRGIPS--LCQSEGTRWSRRGRRWAERCP-PGVLGAGRSL 107
P E NG +A+P AG + LG R PS +S R R + ER P PG+L
Sbjct: 68 PDELNGPRASPHAGVI--LGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
Query: 108 RAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPR 167
R R + S PPL P +PR+ AG +A G G A P +
Sbjct: 126 RDSRRHVTSSQPPL-----PATQIRPRNPCPAG------RAGGHVAGAPVPAAPWCIAAA 174
Query: 168 SGHAGSALKAGSCPRLGGGGR 188
+G A + + S GR
Sbjct: 175 AGRARARTGSPSSDVAAAAGR 195
>gi|169204294 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 301
Score = 36.6 bits (83), Expect = 0.024
Identities = 43/141 (30%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 51 PGEQNGRKATPQAGALGALGIRGIPS--LCQSEGTRWSRRGRRWAERCP-PGVLGAGRSL 107
P E NG +A+P AG + LG R PS +S R R + ER P PG+L
Sbjct: 68 PDELNGPRASPHAGVI--LGRRRRPSHEARRSARLRPGLRRLQQRERPPRPGLLLESGRR 125
Query: 108 RAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPR 167
R R + S PPL P +PR+ AG +A G G A P +
Sbjct: 126 RDSRRHVTSSQPPL-----PATQIRPRNPCPAG------RAGGHVAGAPVPAAPWCIAAA 174
Query: 168 SGHAGSALKAGSCPRLGGGGR 188
+G A + + S GR
Sbjct: 175 AGRARARTGSPSSDVAAAAGR 195
>gi|239743861 PREDICTED: hypothetical protein XP_002342981 [Homo
sapiens]
Length = 139
Score = 36.6 bits (83), Expect = 0.024
Identities = 37/108 (34%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 97 PPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWK 156
PPG A R R ++ R H L+P+R + +A A A L A+ + RG
Sbjct: 41 PPGPSKAARRGRGEQVRTH-----LAPVRVLPNTAAEATAKRAPVPSAPLPAARSPRG-- 93
Query: 157 YHALPLRLDPRS-------GHAG------SALKAGSCPRLGGGGRGRG 191
P L PRS G G S L AG P LG GG GRG
Sbjct: 94 ----PQPLSPRSSWVRGMPGRGGHQRPLFSTLGAGFQPPLGRGGAGRG 137
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 36.6 bits (83), Expect = 0.024
Identities = 65/264 (24%), Positives = 96/264 (36%), Gaps = 25/264 (9%)
Query: 14 PGSKCRVPWQRREFPS--------RGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGA 65
P K R +RR S RG P+P QR ++ + R+ ++G+
Sbjct: 1735 PAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRD-RSGS 1793
Query: 66 LGALGIRGIPSLCQSEGTRWSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRPPPLSPLR 125
+ R S +S TR R G + R P + S R +R R SR PP S R
Sbjct: 1794 SQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGR--SRTPPTSRKR 1851
Query: 126 K-----PGGSNQPRSAAAAGTHEACLQASG--TTRGWKYHALPLRLDPRSGHAGSALKAG 178
P + RS A+ TH + + R + P+ RS S +
Sbjct: 1852 SRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRR-RSRSRTSVTRRR 1910
Query: 179 SCPRLGGGGRGRGEAGAP------SRFWLPRSLQQLLPNEPRNADVQTLHPTPSHTRRGQ 232
S R R R + P SR P + ++ P ++ TP TRR
Sbjct: 1911 SRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRS 1970
Query: 233 RTGKGARGPRFWKSKNSPANRQSS 256
R+ R +S+ SP R+ S
Sbjct: 1971 RSRTSPITRRRSRSRTSPVTRRRS 1994
Score = 35.0 bits (79), Expect = 0.069
Identities = 68/299 (22%), Positives = 93/299 (31%), Gaps = 62/299 (20%)
Query: 21 PWQRREFPSRGGRKQPQPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIP----S 76
P RE S K G +R ++ P + GR +P G R S
Sbjct: 447 PGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHS 506
Query: 77 LCQSEGTRWSRRGRRWAERCPPGVLGA------------------GRSLRAQRSRLHSRP 118
+S R SR +RW P G GRS A+R R HSR
Sbjct: 507 RSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRS 566
Query: 119 PPL---SPLRKPGGSNQPRSAAAA--------GTHEACLQASGTTRGWKYHALPLR---- 163
P S R P + RS A T + RG P R
Sbjct: 567 PATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSR 626
Query: 164 ----LDPRSGHAGSALKAGSCPRLGGGGRGRGEAGAPSRFWLPRS--------------- 204
+ RS A ++G RGR + P+R RS
Sbjct: 627 TRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Query: 205 -----LQQLLPNEPRNADVQTLHPTPSHTRRGQRTGK-GARGPRFWKSKNSPANRQSSA 257
+ P R+ + SH+R QR G+ G+ R KS+ S +S++
Sbjct: 687 ARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNS 745
Score = 34.3 bits (77), Expect = 0.12
Identities = 65/261 (24%), Positives = 95/261 (36%), Gaps = 36/261 (13%)
Query: 28 PSRGGRKQPQPGSRQRKQNPI--SLPGEQNGRKATPQAGALGALGIRGIP---SLCQSEG 82
PSR R PG R P SL G G K P+ + G P +L Q+
Sbjct: 1435 PSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPR 1494
Query: 83 TR--------------WSRRGRRWAERCPPGVLGAGRSLRAQRSRLHSRP-----PPLSP 123
R +R R +E A R+ QRSR S P SP
Sbjct: 1495 PRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVA-RTPLGQRSRSGSSQELDVKPSASP 1553
Query: 124 LRKPGGSNQPRSAAAAGTHEACLQASGTTRGWKYHALPLRLDPRSGHAGSAL----KAGS 179
+ + P S A T SG++ + RL PR +GS+ K +
Sbjct: 1554 QERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKS---RLSPRRSRSGSSPEVKDKPRA 1610
Query: 180 CPRLGGGGRGRGEAGAPSRFWLPRSLQQLLPNEPRNADVQ---TLHPTPSHTRRGQRTGK 236
PR G E AP+ LPR + ++ R + + +P H + + +
Sbjct: 1611 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR 1670
Query: 237 GARGPRFWKSKN-SPANRQSS 256
G+R K+K+ +P R+SS
Sbjct: 1671 GSRSSPEPKTKSRTPPRRRSS 1691
>gi|148806874 hypothetical protein LOC54754 [Homo sapiens]
Length = 756
Score = 36.6 bits (83), Expect = 0.024
Identities = 44/156 (28%), Positives = 52/156 (33%), Gaps = 14/156 (8%)
Query: 37 QPGSRQRKQNPISLPGEQNGRKATPQAGALGALGIRGIPSLCQSEGTRWSRRGRRWAERC 96
Q R + P S P Q+ R P G ALG+ G + +S G +G
Sbjct: 582 QDSPRLKAVRPTSPP--QDHRPTCPGLGTKDALGLPGESPVKESHGLA---KGSSEETEL 636
Query: 97 PPGVLGAGRSLRAQRSRLHSRPPPLSPLRKPGGSNQPRSAAAAGTHEACLQASGTTRGWK 156
P V G R + RL P P S L PGG G A S RG
Sbjct: 637 PGMVYVVGSHHRLRPWRLSQSPVPSSGLLSPGG---------RGPQGALQSPSAQKRGLS 687
Query: 157 YHALPLRLDPRSGHAGSALKAGSCPRLGGGGRGRGE 192
P + GS A P G G R GE
Sbjct: 688 PSPSPASKSKKRPLFGSPSPAEKTPHPGPGLRVSGE 723
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,128,160
Number of Sequences: 37866
Number of extensions: 837027
Number of successful extensions: 5200
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 4667
Number of HSP's gapped (non-prelim): 902
length of query: 268
length of database: 18,247,518
effective HSP length: 100
effective length of query: 168
effective length of database: 14,460,918
effective search space: 2429434224
effective search space used: 2429434224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.