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Search of human proteins with 239741014
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741014 PREDICTED: hypothetical protein XP_002342054 [Homo
sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752671 PREDICTED: hypothetical protein [Homo sapiens] 317 2e-87
gi|239747188 PREDICTED: hypothetical protein [Homo sapiens] 317 2e-87
gi|239741014 PREDICTED: hypothetical protein XP_002342054 [Homo ... 317 2e-87
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 35 0.029
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 33 0.066
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 31 0.42
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 31 0.42
gi|71040090 regulatory factor X, 5 [Homo sapiens] 30 0.55
gi|4557843 regulatory factor X, 5 [Homo sapiens] 30 0.55
gi|4505737 complement factor properdin precursor [Homo sapiens] 30 0.72
gi|223671861 complement factor properdin precursor [Homo sapiens] 30 0.72
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 30 0.72
gi|6912242 adaptor protein, phosphotyrosine interaction, PH doma... 30 0.72
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 30 0.95
gi|14211923 PKCI-1-related HIT protein [Homo sapiens] 30 0.95
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 30 0.95
gi|134031945 SCO-spondin [Homo sapiens] 30 0.95
gi|33695078 protein phosphatase 2, regulatory subunit B'', beta ... 30 0.95
gi|56790919 haspin [Homo sapiens] 29 1.2
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 29 1.6
gi|239754672 PREDICTED: hypothetical protein XP_002346070 [Homo ... 29 1.6
gi|239749253 PREDICTED: hypothetical protein XP_002346961 [Homo ... 29 1.6
gi|239743347 PREDICTED: hypothetical protein XP_002342825 [Homo ... 29 1.6
gi|239509035 PREDICTED: hypothetical protein [Homo sapiens] 29 1.6
gi|87196343 PDZ domain containing 2 [Homo sapiens] 29 1.6
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 29 1.6
gi|58331179 KIAA1688 protein [Homo sapiens] 29 1.6
gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo ... 28 2.1
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 28 2.1
gi|221219026 pleckstrin homology-like domain, family B, member 1... 28 2.8
>gi|239752671 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 317 bits (813), Expect = 2e-87
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS
Sbjct: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
Query: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD
Sbjct: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
Query: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
ATRSLSWRSRSVHRVLFPWKMCTLETA
Sbjct: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
>gi|239747188 PREDICTED: hypothetical protein [Homo sapiens]
Length = 147
Score = 317 bits (813), Expect = 2e-87
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS
Sbjct: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
Query: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD
Sbjct: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
Query: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
ATRSLSWRSRSVHRVLFPWKMCTLETA
Sbjct: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
>gi|239741014 PREDICTED: hypothetical protein XP_002342054 [Homo
sapiens]
Length = 147
Score = 317 bits (813), Expect = 2e-87
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS
Sbjct: 1 MEAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
Query: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD
Sbjct: 61 SGQLCLHLRGTSTPAPTCVPLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
Query: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
ATRSLSWRSRSVHRVLFPWKMCTLETA
Sbjct: 121 ATRSLSWRSRSVHRVLFPWKMCTLETA 147
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 34.7 bits (78), Expect = 0.029
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 14 RGNFHTCAPGLTQRHEVARP-PLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTS 72
R NFH+ + ++ ++ RP PLP + +TP + P + +SG + L +
Sbjct: 640 RTNFHSSVAFMFRKFKILRPAPLPAAVVP--STPTSAPAPTQPAPTPTSGPIGLRILAQQ 697
Query: 73 TPAPTCVPLAPKLPPYVWVAS 93
+ TC LA PP V VAS
Sbjct: 698 PLSVTCFSLALPSPPAVAVAS 718
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 33.5 bits (75), Expect = 0.066
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTS-TPAPTCVPLAPKLPP 87
E PP+P + A P T +LAA+ G S + CL L S P P+C L P+ P
Sbjct: 286 EPRNPPVPWT-----AAPATLELAAVYQGLSVSPEPCLSLGAPSLLPHPSCQRLQPQTPG 340
Query: 88 YVW 90
W
Sbjct: 341 RCW 343
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 30.8 bits (68), Expect = 0.42
Identities = 24/74 (32%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQ-----LCLHLRGTSTPAP------- 76
E R PLP S++D TP QL LP + S HLRG P+
Sbjct: 501 EHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTP 560
Query: 77 ---TCVPLAPKLPP 87
PL P PP
Sbjct: 561 SERQLTPLPPSAPP 574
Score = 27.7 bits (60), Expect = 3.6
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 15/79 (18%)
Query: 24 LTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQ-----LCLHLRGTSTPAP-- 76
L R E PLP S++D TP QL LP + S LRG P+
Sbjct: 328 LKTRAECLLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTTAERLRGPLPPSADD 387
Query: 77 --------TCVPLAPKLPP 87
PL P PP
Sbjct: 388 NLKTPSERQLTPLPPSAPP 406
Score = 27.3 bits (59), Expect = 4.7
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCL-----HLRGTSTPAP------- 76
E R PLP S++D TP QL LP + S + LRG P+
Sbjct: 417 EHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTP 476
Query: 77 ---TCVPLAPKLPP 87
PL P PP
Sbjct: 477 SERQLTPLPPSAPP 490
Score = 26.9 bits (58), Expect = 6.1
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 15/71 (21%)
Query: 32 RPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCL-----HLRGTSTPAP---------- 76
R PLP S++D TP QL LP + S + LRG P+
Sbjct: 889 RGPLPPSADDNLKTPSKRQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSER 948
Query: 77 TCVPLAPKLPP 87
PL P PP
Sbjct: 949 QLTPLPPSAPP 959
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALP 55
E R PLP S++D TP QL LP
Sbjct: 928 ERLRGPLPPSADDNLKTPSERQLTPLP 954
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALP 55
E R PLP S++D TP QL LP
Sbjct: 970 ERLRGPLPPSADDNLKTPSERQLTPLP 996
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 30.8 bits (68), Expect = 0.42
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 8 AWPRGLRGNFHTCAP-----GLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSG 62
A P+ R T AP T+R ARP +P GS + LP GS S G
Sbjct: 543 ASPKVTRSPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPP--APPLPPGSGSPG 600
Query: 63 Q---LCLHLRGTSTPAPTCVPLAPKLPP 87
L L G+S APT P P PP
Sbjct: 601 TPQALPRRLVGSSLRAPTVPPPLPPTPP 628
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 30.4 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 12 GLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPD 47
G RG C G+ ++ V+ PPLPG GS +P+
Sbjct: 152 GGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPE 187
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 30.4 bits (67), Expect = 0.55
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 12 GLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPD 47
G RG C G+ ++ V+ PPLPG GS +P+
Sbjct: 152 GGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPE 187
>gi|4505737 complement factor properdin precursor [Homo sapiens]
Length = 469
Score = 30.0 bits (66), Expect = 0.72
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 24/108 (22%)
Query: 11 RGLRGNFHTCA---PGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLH 67
RG + + H CA + + + PL GS + S TW L P G
Sbjct: 351 RGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWS----TWGLCMPPCGP--------- 397
Query: 68 LRGTSTPAPTCVPLAPKLPPYVWVAS-------EMWGRRHSRKKGIRG 108
T C PL PK PP V + WGR R + ++G
Sbjct: 398 -NPTRARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQG 444
>gi|223671861 complement factor properdin precursor [Homo sapiens]
Length = 469
Score = 30.0 bits (66), Expect = 0.72
Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 24/108 (22%)
Query: 11 RGLRGNFHTCA---PGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLH 67
RG + + H CA + + + PL GS + S TW L P G
Sbjct: 351 RGRKFDGHRCAGQQQDIRHCYSIQHCPLKGSWSEWS----TWGLCMPPCGP--------- 397
Query: 68 LRGTSTPAPTCVPLAPKLPPYVWVAS-------EMWGRRHSRKKGIRG 108
T C PL PK PP V + WGR R + ++G
Sbjct: 398 -NPTRARQRLCTPLLPKYPPTVSMVEGQGEKNVTFWGRPLPRCEELQG 444
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 30.0 bits (66), Expect = 0.72
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 22 PGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLS 60
P Q+ + PP P SS S+TP WQ +LP +++
Sbjct: 498 PPWQQQQQQPPPPPPPSSSMASSTPLPWQQRSLPAAAMA 536
>gi|6912242 adaptor protein, phosphotyrosine interaction, PH domain
and leucine zipper containing 1 [Homo sapiens]
Length = 709
Score = 30.0 bits (66), Expect = 0.72
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 19 TCAPGLTQRHEV-------ARPPLPGSSEDGSATPDTWQLAALPLGSL 59
T +P QRHE +RPP +S GS ++ LAAL L SL
Sbjct: 399 TPSPSFQQRHESLRPAAGQSRPPTARTSSSGSLGSESTNLAALSLDSL 446
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 0.95
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 2 EAWGLCAWPRGLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQ------LAALP 55
E LCA R R F PG V +P PG+ + +++ D + + A+P
Sbjct: 132 EGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTDICRPHQICNVVAIP 191
Query: 56 LGSLSSGQLCLHLRGTSTPAPTCVPL 81
G+ S +C T + AP V L
Sbjct: 192 -GNASMDAVCTSTSPTRSMAPGAVHL 216
>gi|14211923 PKCI-1-related HIT protein [Homo sapiens]
Length = 163
Score = 29.6 bits (65), Expect = 0.95
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 12 GLRGNFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLA---ALPLGSLSSGQLCLHL 68
G+RG A G+T +EVA+ + G A P + +LP L Q CL
Sbjct: 22 GVRGGQVRGAAGVTDGNEVAKAQ---QATPGGAAPTIFSRILDKSLPADILYEDQQCLVF 78
Query: 69 RGTSTPAPTCVPLAPKLP 86
R + AP + PK P
Sbjct: 79 RDVAPQAPVHFLVIPKKP 96
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 29.6 bits (65), Expect = 0.95
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 33 PPLPGSSEDGSATPDTWQL-AALPLGSLSSGQLCLHLRGTSTPAPTCVPLAP 83
PP PGS+ + PD +Q+ ++P SG + + + TS PAP+ PLAP
Sbjct: 205 PPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQV-ATSVPAPS-PPLAP 254
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 29.6 bits (65), Expect = 0.95
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 19 TCAPGLT-QRHEVARPPLPGSS 39
+C GLT QR E+ RPPLPG S
Sbjct: 2515 SCGLGLTFQRQELLRPPLPGGS 2536
>gi|33695078 protein phosphatase 2, regulatory subunit B'', beta
isoform 1 [Homo sapiens]
Length = 575
Score = 29.6 bits (65), Expect = 0.95
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 22 PGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPAPTCVPL 81
PG +A P G G+ P ALPLG+ SS + H+RGT A T V
Sbjct: 55 PGAWPTAPLAAPRPSGLEPPGTPGPGP----ALPLGAASSPRNAPHVRGTRRSAGTRVVQ 110
Query: 82 APK---LPP 87
K LPP
Sbjct: 111 TRKEEPLPP 119
>gi|56790919 haspin [Homo sapiens]
Length = 798
Score = 29.3 bits (64), Expect = 1.2
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 22 PGLTQRHEVARPP--LPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPAPTCV 79
PG R RP +P + TP W+L A P +++ +L L R + C
Sbjct: 72 PGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRARPPQKCSTPCG 131
Query: 80 PLAPKLPPY 88
PL +LPP+
Sbjct: 132 PL--RLPPF 138
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 28.9 bits (63), Expect = 1.6
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQL-CLHLRGTSTPAP----------T 77
E R PLP S++D TP QL ALP + + + LRG P+
Sbjct: 497 ERLRGPLPPSADDNLKTPSERQLTALPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQ 556
Query: 78 CVPLAPKLPP 87
PL P PP
Sbjct: 557 LTPLPPSAPP 566
Score = 27.3 bits (59), Expect = 4.7
Identities = 24/79 (30%), Positives = 29/79 (36%), Gaps = 15/79 (18%)
Query: 24 LTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCL-----HLRGTSTPAP-- 76
L R E PLP S++D TP QL LP + S + LRG P+
Sbjct: 366 LKTRAECLLHPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADD 425
Query: 77 --------TCVPLAPKLPP 87
PL P PP
Sbjct: 426 NLKTPSERQLTPLPPSAPP 444
Score = 27.3 bits (59), Expect = 4.7
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 15/74 (20%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCL-----HLRGTSTPAP------- 76
E R PLP S++D TP QL LP + S + LRG P+
Sbjct: 868 ERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTP 927
Query: 77 ---TCVPLAPKLPP 87
PL P PP
Sbjct: 928 SERQLTPLPPSAPP 941
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALP 55
E R PLP S++D TP QL LP
Sbjct: 455 ERLRGPLPPSADDNLKTPSERQLTPLP 481
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 29 EVARPPLPGSSEDGSATPDTWQLAALP 55
E R PLP S++D TP QL LP
Sbjct: 952 ERLRGPLPPSADDNLKTPSERQLTPLP 978
>gi|239754672 PREDICTED: hypothetical protein XP_002346070 [Homo
sapiens]
Length = 113
Score = 28.9 bits (63), Expect = 1.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 16 NFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPA 75
N T PGLT+ R PLPG S SA A GSL +L LH ++
Sbjct: 30 NLPTPDPGLTRELTRPRLPLPGQSPHLSA-------AGFSGGSLLGSEL-LH---PNSFQ 78
Query: 76 PTCVPLAPKLPPYVWVASEMWGR 98
P L P P W A+E+ R
Sbjct: 79 PLRQTLVPHRAPPSWSAAELLPR 101
>gi|239749253 PREDICTED: hypothetical protein XP_002346961 [Homo
sapiens]
Length = 113
Score = 28.9 bits (63), Expect = 1.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 16 NFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPA 75
N T PGLT+ R PLPG S SA A GSL +L LH ++
Sbjct: 30 NLPTPDPGLTRELTRPRLPLPGQSPHLSA-------AGFSGGSLLGSEL-LH---PNSFQ 78
Query: 76 PTCVPLAPKLPPYVWVASEMWGR 98
P L P P W A+E+ R
Sbjct: 79 PLRQTLVPHRAPPSWSAAELLPR 101
>gi|239743347 PREDICTED: hypothetical protein XP_002342825 [Homo
sapiens]
Length = 113
Score = 28.9 bits (63), Expect = 1.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 16 NFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPA 75
N T PGLT+ R PLPG S SA A GSL +L LH ++
Sbjct: 30 NLPTPDPGLTRELTRPRLPLPGQSPHLSA-------AGFSGGSLLGSEL-LH---PNSFQ 78
Query: 76 PTCVPLAPKLPPYVWVASEMWGR 98
P L P P W A+E+ R
Sbjct: 79 PLRQTLVPHRAPPSWSAAELLPR 101
>gi|239509035 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 28.9 bits (63), Expect = 1.6
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 16 NFHTCAPGLTQRHEVARPPLPGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPA 75
N T PGLT+ R PLPG S SA A GSL +L LH ++
Sbjct: 30 NLPTPDPGLTRELTRPRLPLPGQSPHLSA-------AGFSGGSLLGSEL-LH---PNSFQ 78
Query: 76 PTCVPLAPKLPPYVWVASEMWGR 98
P L P P W A+E+ R
Sbjct: 79 PLRQTLVPHRAPPSWSAAELLPR 101
>gi|87196343 PDZ domain containing 2 [Homo sapiens]
Length = 2839
Score = 28.9 bits (63), Expect = 1.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 97 GRRHSRKKGIRGASTSSEHFIPQDATRSLSWRSRSVHRVLFPWKM 141
GR+HS + + +S S E+ I + +TRSL S +V PW++
Sbjct: 539 GRKHSLPQLLDSSSASQEYHIVKKSTRSL-----STTQVESPWRL 578
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 28.9 bits (63), Expect = 1.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 36 PGSSEDGSATPDTWQLAALPLGSLSSGQLCLHLRGTSTPAP 76
P + ++ S +P+ + A P+ + ++ Q + L GT PAP
Sbjct: 274 PTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP 314
>gi|58331179 KIAA1688 protein [Homo sapiens]
Length = 1114
Score = 28.9 bits (63), Expect = 1.6
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 18/133 (13%)
Query: 12 GLRGNFHTCAPGLTQRHEVARPPLPGSSEDG---SATPDTWQLAALPLGSLS----SGQL 64
G++ ++ G RH PLP + ED S+ DT G+ L
Sbjct: 442 GVKSGDYSTMEGPELRHSQPPTPLPQAQEDAMSWSSQQDTLSSTGYSPGTRKRKSRKPSL 501
Query: 65 CLHLRGTSTPAPTCV----PLAPKLPPYVWVASEMWGRRHSRKKGIRGASTSSEHFIPQD 120
C T T P + PLA + PP + + R +G RGA +E F+ Q
Sbjct: 502 CQATSATPTEGPGDLLVEQPLAEEQPPCGTSLAPV-KRAEGEAEGARGA---AEPFLAQ- 556
Query: 121 ATRSLSWRSRSVH 133
L+W ++ H
Sbjct: 557 --ARLAWEAQQAH 567
>gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo
sapiens]
Length = 684
Score = 28.5 bits (62), Expect = 2.1
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 15/71 (21%)
Query: 22 PGLTQRHEVAR---PPLPGSSEDGSATPDTWQLA------ALPLG-SLSSGQL----CLH 67
PGLT + P P +E G+ P +QL ++PLG +L GQL C
Sbjct: 310 PGLTDEMQYTERDWEPPPQEAEQGAHGP-AFQLVPVSQSDSIPLGLTLVKGQLLERLCSP 368
Query: 68 LRGTSTPAPTC 78
+RG + P P C
Sbjct: 369 MRGAALPGPGC 379
>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
sapiens]
Length = 909
Score = 28.5 bits (62), Expect = 2.1
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 15/71 (21%)
Query: 22 PGLTQRHEVAR---PPLPGSSEDGSATPDTWQLA------ALPLG-SLSSGQL----CLH 67
PGLT + P P +E G+ P +QL ++PLG +L GQL C
Sbjct: 310 PGLTDEMQYTERDWEPPPQEAEQGAHGP-AFQLVPVSQSDSIPLGLTLVKGQLLERLCSP 368
Query: 68 LRGTSTPAPTC 78
+RG + P P C
Sbjct: 369 MRGAALPGPGC 379
>gi|221219026 pleckstrin homology-like domain, family B, member 1
isoform b [Homo sapiens]
Length = 1319
Score = 28.1 bits (61), Expect = 2.8
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 27 RHEVARPPLPGSSEDGSATPDTWQLAALPLGS-LSSGQLCLHLRGTSTPAPTCVPLAP 83
R+ ++ P PG+ GS+ +T A PL S SSG H P P+ PL P
Sbjct: 230 RYLLSPPTSPGAMSVGSSYENT-SPAFSPLSSPASSGSCASHSPSGQEPGPSVPPLVP 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,181,576
Number of Sequences: 37866
Number of extensions: 346839
Number of successful extensions: 1388
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1283
Number of HSP's gapped (non-prelim): 151
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.