Guide to the Human Genome
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Name: HINT2 Sequence: fasta or formatted (163aa) NCBI GI: 14211923
Description:

PKCI-1-related HIT protein

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.3         25           3
 C cysteine            0.6          1           1
 D aspartate           4.9          8           1
 E glutamate           3.7          6           3
 F phenylalanine       1.8          3           1
 G glycine            11.0         18           2
 H histidine           3.1          5           1
 I isoleucine          4.9          8           1
 K lysine              4.3          7           2
 L leucine            11.0         18           3
 M methionine          0.6          1           1
 N asparagine          1.2          2           1
 P proline             6.1         10           2
 Q glutamine           8.0         13           2
 R arginine            6.1         10           2
 S serine              2.5          4           1
 T threonine           3.1          5           1
 V valine              9.2         15           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PKCI-1-related HIT protein 
HINT1                 0.466   histidine triad nucleotide binding protein 1 
HINT3                 0.074   histidine triad nucleotide binding protein 3 
APTX                  0.070   aprataxin isoform a 
APTX                  0.070   aprataxin isoform c 
APTX                  0.070   aprataxin isoform b 
APTX                  0.057   aprataxin isoform d 
APTX                  0.057   aprataxin isoform d 
FHIT                  0.030   fragile histidine triad gene 
RBM28                 0.017   RNA binding motif protein 28 
TTN                   0.017   titin isoform N2-A 
LOC100293374          0.017   PREDICTED: hypothetical protein 
LOC100287750          0.017   PREDICTED: hypothetical protein 
LOC100287750          0.017   PREDICTED: hypothetical protein XP_002342054 
ANKFY1                0.017   ankyrin repeat and FYVE domain containing 1 isoform...
LOC100133885          0.013   PREDICTED: hypothetical protein 
ZSWIM6                0.013   zinc finger, SWIM-type containing 6 
NOL6                  0.013   nucleolar protein family 6 gamma isoform 
NOL6                  0.013   nucleolar protein family 6 alpha isoform 
KIAA0947              0.010   hypothetical protein LOC23379 
LOC100292370          0.010   PREDICTED: hypothetical protein 
HNRNPM                0.010   heterogeneous nuclear ribonucleoprotein M isoform a ...
HNRNPM                0.010   heterogeneous nuclear ribonucleoprotein M isoform b...
EVPLL                 0.007   envoplakin-like 
BMP6                  0.007   bone morphogenetic protein 6 preproprotein 
CDC5L                 0.007   CDC5-like 
SNX7                  0.007   sorting nexin 7 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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