TMEM88 28147

Name: TMEM88	Sequence: fasta or formatted (159aa)		NCBI GI: 44662813
Description: transmembrane protein 88		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 19 2 C cysteine 3.8 6 1 D aspartate 3.8 6 1 E glutamate 0.6 1 1 F phenylalanine 3.8 6 1 G glycine 6.3 10 1 H histidine 1.3 2 1 I isoleucine 1.3 2 1 K lysine 0.6 1 1 L leucine 19.5 31 4 M methionine 1.3 2 1 N asparagine 1.3 2 1 P proline 9.4 15 2 Q glutamine 4.4 7 1 R arginine 9.4 15 4 S serine 4.4 7 1 T threonine 4.4 7 1 V valine 9.4 15 1 W tryptophan 1.3 2 1 Y tyrosine 1.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 88 TMEM88B 0.128 hypothetical protein LOC643965 TMEM88B 0.128 PREDICTED: hypothetical protein LOC643965 TMEM88B 0.027 PREDICTED: hypothetical protein LOC643965 TMPRSS5 0.017 transmembrane protease, serine 5 ASGR2 0.010 asialoglycoprotein receptor 2 isoform a ASGR2 0.010 asialoglycoprotein receptor 2 isoform a LONRF2 0.010 LON peptidase N-terminal domain and ring finger 2 [... DUOXA1 0.010 Numb-interacting protein ASGR2 0.010 asialoglycoprotein receptor 2 isoform c ASGR2 0.010 asialoglycoprotein receptor 2 isoform b LOC154860 0.007 PREDICTED: hypothetical protein LOC154860 LPAR3 0.007 lysophosphatidic acid receptor 3 SLC39A13 0.007 solute carrier family 39 (zinc transporter), member ... SLC39A13 0.007 solute carrier family 39 (zinc transporter), member... C1orf66 0.007 hypothetical protein LOC51093 isoform 1 NOTCH3 0.007 Notch homolog 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.