LOC100288202 16684

Name: LOC100288202	Sequence: fasta or formatted (168aa)		NCBI GI: 239741001
Description: PREDICTED: hypothetical protein XP_002342060		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.5 26 2 C cysteine 1.2 2 1 D aspartate 7.1 12 3 E glutamate 6.0 10 2 F phenylalanine 2.4 4 1 G glycine 13.1 22 2 H histidine 1.2 2 1 I isoleucine 1.2 2 1 K lysine 1.2 2 1 L leucine 5.4 9 2 M methionine 1.2 2 1 N asparagine 0.0 0 0 P proline 5.4 9 2 Q glutamine 9.5 16 2 R arginine 6.5 11 2 S serine 5.4 9 1 T threonine 3.6 6 1 V valine 10.7 18 2 W tryptophan 3.0 5 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342060 LOC100293554 0.994 PREDICTED: hypothetical protein LOC100289723 0.483 PREDICTED: hypothetical protein XP_002346408 LOC100287290 0.032 PREDICTED: hypothetical protein LOC100287290 0.032 PREDICTED: hypothetical protein XP_002342446 SRF 0.025 serum response factor (c-fos serum response element-b... APOB48R 0.025 apolipoprotein B48 receptor C1orf167 0.022 PREDICTED: chromosome 1 open reading frame 167 [Hom... C1orf167 0.022 PREDICTED: chromosome 1 open reading frame 167 [Hom... C1orf167 0.022 PREDICTED: hypothetical protein LOC284498 ARX 0.022 aristaless related homeobox EIF2AK3 0.019 eukaryotic translation initiation factor 2-alpha ki... COL8A1 0.019 alpha 1 type VIII collagen precursor COL8A1 0.019 alpha 1 type VIII collagen precursor SLC38A10 0.016 solute carrier family 38, member 10 isoform a LOC100287184 0.016 PREDICTED: hypothetical protein XP_002343805 SH3TC1 0.013 SH3 domain and tetratricopeptide repeats 1 CASZ1 0.013 castor homolog 1, zinc finger isoform a PDE4A 0.013 phosphodiesterase 4A isoform 2 COL10A1 0.013 type X collagen alpha 1 precursor ARID1A 0.013 AT rich interactive domain 1A isoform a ARID1A 0.013 AT rich interactive domain 1A isoform b CCDC9 0.009 coiled-coil domain containing 9 ZNF264 0.009 zinc finger protein 264 LYG1 0.009 lysozyme g-like protein 1 precursor ARMC5 0.009 armadillo repeat containing 5 isoform a COL4A1 0.009 alpha 1 type IV collagen preproprotein RRP8 0.009 ribosomal RNA processing 8, methyltransferase, homol... COL9A3 0.009 alpha 3 type IX collagen C19orf29 0.009 chromosome 19 open reading frame 29 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.