Guide to the Human Genome
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Name: LYG1 Sequence: fasta or formatted (194aa) NCBI GI: 28372527
Description:

lysozyme g-like protein 1 precursor

Referenced in:

Additional Enzymes and Related Sequences

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         12           1
 C cysteine            3.6          7           1
 D aspartate           5.7         11           1
 E glutamate           3.1          6           1
 F phenylalanine       1.5          3           1
 G glycine             9.8         19           2
 H histidine           1.0          2           1
 I isoleucine          4.6          9           1
 K lysine              3.6          7           1
 L leucine            10.8         21           3
 M methionine          4.1          8           2
 N asparagine          2.6          5           1
 P proline             4.6          9           1
 Q glutamine           5.7         11           1
 R arginine            6.7         13           2
 S serine              9.8         19           2
 T threonine           5.2         10           2
 V valine              4.6          9           1
 W tryptophan          2.1          4           1
 Y tyrosine            4.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysozyme g-like protein 1 precursor 
LYG2                  0.316   lysozyme G-like 2 
FASN                  0.011   fatty acid synthase 
CX3CL1                0.008   chemokine (C-X3-C motif) ligand 1 
LOC100293554          0.008   PREDICTED: hypothetical protein 
LOC100289723          0.008   PREDICTED: hypothetical protein XP_002346408 
LOC100288202          0.008   PREDICTED: hypothetical protein XP_002342060 
B3GNT8                0.008   UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltran...
RCSD1                 0.008   RCSD domain containing 1 
MCF2L2                0.008   Rho family guanine-nucleotide exchange factor 
MAML2                 0.005   mastermind-like 2 
PDP2                  0.005   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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