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Search of human proteins with 23943862
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23943862 N-acetyltransferase 14 [Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23943862 N-acetyltransferase 14 [Homo sapiens] 413 e-116
gi|126352446 elastin isoform d precursor [Homo sapiens] 32 0.38
gi|126352440 elastin isoform a precursor [Homo sapiens] 32 0.38
gi|239753357 PREDICTED: hypothetical protein [Homo sapiens] 31 0.65
gi|239747925 PREDICTED: hypothetical protein [Homo sapiens] 31 0.65
gi|239741819 PREDICTED: hypothetical protein [Homo sapiens] 31 0.65
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 31 0.65
gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens] 31 0.65
gi|171543823 gamma-glutamyltransferase 6 isoform b [Homo sapiens] 31 0.65
gi|23397572 kelch-like 34 [Homo sapiens] 31 0.65
gi|126352608 elastin isoform e precursor [Homo sapiens] 31 0.85
gi|126352322 elastin isoform c precursor [Homo sapiens] 31 0.85
gi|126352700 elastin isoform b precursor [Homo sapiens] 31 0.85
gi|239747471 PREDICTED: hypothetical protein XP_002347542 [Homo ... 31 0.85
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 31 0.85
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 31 0.85
gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo ... 30 1.1
gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo ... 30 1.1
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 30 1.1
gi|153252029 C-type lectin domain family 1, member B isoform a [... 30 1.1
gi|4502683 CD72 molecule [Homo sapiens] 30 1.1
gi|40255047 pleckstrin homology domain containing, family H (wit... 30 1.1
gi|239749936 PREDICTED: similar to single Ig IL-1R-related molec... 30 1.4
gi|53988380 mesothelin isoform 2 preproprotein [Homo sapiens] 30 1.4
gi|53988378 mesothelin isoform 1 preproprotein [Homo sapiens] 30 1.4
gi|19718780 semaphorin 6B precursor [Homo sapiens] 30 1.4
gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [H... 29 2.5
gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Hom... 29 2.5
gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo ... 29 2.5
gi|10835203 advanced glycosylation end product-specific receptor... 29 3.2
>gi|23943862 N-acetyltransferase 14 [Homo sapiens]
Length = 206
Score = 413 bits (1062), Expect = e-116
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MAPSHLSVREMREDEKPLVLEMLKAGVKDTENRVALHALTRPPALLLLAAASSGLRFVLA 60
MAPSHLSVREMREDEKPLVLEMLKAGVKDTENRVALHALTRPPALLLLAAASSGLRFVLA
Sbjct: 1 MAPSHLSVREMREDEKPLVLEMLKAGVKDTENRVALHALTRPPALLLLAAASSGLRFVLA 60
Query: 61 SFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAG 120
SFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAG
Sbjct: 61 SFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAG 120
Query: 121 DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVPVAVAAWGVGGML 180
DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVPVAVAAWGVGGML
Sbjct: 121 DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVPVAVAAWGVGGML 180
Query: 181 EGCGYQAEGGWGCLGYTLVREFSKDL 206
EGCGYQAEGGWGCLGYTLVREFSKDL
Sbjct: 181 EGCGYQAEGGWGCLGYTLVREFSKDL 206
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 32.0 bits (71), Expect = 0.38
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 73 AVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTR-LSVS 131
A AA K +A L P G+ P V V V + LAPG G V + V+
Sbjct: 463 AAAAAKAAAKAAQFGLVPGVGVA-PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVA 521
Query: 132 RWHRRRGVGRRLLAFAEARARAW---AGGMGEPRARLVVPVAVAAWGVGGMLEGCGYQA 187
GV + A+ A+A A G+G L V V V GVG + G G A
Sbjct: 522 PGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 580
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 32.0 bits (71), Expect = 0.38
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 73 AVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTR-LSVS 131
A AA K +A L P G+ P V V V + LAPG G V + V+
Sbjct: 458 AAAAAKAAAKAAQFGLVPGVGVA-PGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVA 516
Query: 132 RWHRRRGVGRRLLAFAEARARAW---AGGMGEPRARLVVPVAVAAWGVGGMLEGCGYQA 187
GV + A+ A+A A G+G L V V V GVG + G G A
Sbjct: 517 PGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGA 575
>gi|239753357 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 60 ASFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNA 119
+S A L+L A+ G WGS G P A +G + + +
Sbjct: 129 SSQAFVLVLSSLPAIRRELAGADPAWGS----GRSSPPGTAQKGPRSRAALTEVQELLHG 184
Query: 120 GDGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRAR 164
G R R+ V R +GRR A A A A AGG +PRAR
Sbjct: 185 ERGRREARVEV-HLARNAALGRRAGARVRAEAAAEAGG-AQPRAR 227
>gi|239747925 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 60 ASFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNA 119
+S A L+L A+ G WGS G P A +G + + +
Sbjct: 129 SSQAFVLVLSSLPAIRRELAGADPAWGS----GRSSPPGTAQKGPRSRAALTEVQELLHG 184
Query: 120 GDGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRAR 164
G R R+ V R +GRR A A A A AGG +PRAR
Sbjct: 185 ERGRREARVEV-HLARNAALGRRAGARVRAEAAAEAGG-AQPRAR 227
>gi|239741819 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 60 ASFALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNA 119
+S A L+L A+ G WGS G P A +G + + +
Sbjct: 129 SSQAFVLVLSSLPAIRRELAGADPAWGS----GRSSPPGTAQKGPRSRAALTEVQELLHG 184
Query: 120 GDGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRAR 164
G R R+ V R +GRR A A A A AGG +PRAR
Sbjct: 185 ERGRREARVEV-HLARNAALGRRAGARVRAEAAAEAGG-AQPRAR 227
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 31.2 bits (69), Expect = 0.65
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 8 VREMREDEKPLVLEML------KAGVKDTENRVALHALTRPPALLLLAAASSGLRFVLAS 61
VR MR+ K ++ E L +A V+ E + H + PP LA+AS + L
Sbjct: 1425 VRRMRQQRKHMLQEKLHLRFCYEAVVRHVEQVLQRHGV--PPPCKPLASASISQKNHLPQ 1482
Query: 62 FALALLLPVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGV 110
+ L+L + +++++ + S+ PPGGL P ++ G + G+
Sbjct: 1483 DSQDLVLGGDVPISSIQATIAKL--SIRPPGGLESPVASLPGPAEPPGL 1529
>gi|171543825 gamma-glutamyltransferase 6 isoform a [Homo sapiens]
Length = 493
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 28/119 (23%)
Query: 81 LRARWGSLPPPGGLGGPW----------------VAVRGSGDVCGVLALAPGTNAGDGAR 124
L AR+G LP P L GP + RG+ +C +L A GT G GAR
Sbjct: 189 LHARFGRLPWPRLLVGPTTLAQEGFLVDTPLARALVARGTEGLCPLLCHADGTPLGAGAR 248
Query: 125 VTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMG------------EPRARLVVPVAV 171
T ++ R + +A AG +G EP +L VP +
Sbjct: 249 ATNPQLAAVLRSAALAPTSDLAGDALLSLLAGDLGVEVPSAVPRPTLEPAEQLPVPQGI 307
>gi|171543823 gamma-glutamyltransferase 6 isoform b [Homo sapiens]
Length = 461
Score = 31.2 bits (69), Expect = 0.65
Identities = 32/119 (26%), Positives = 44/119 (36%), Gaps = 28/119 (23%)
Query: 81 LRARWGSLPPPGGLGGPW----------------VAVRGSGDVCGVLALAPGTNAGDGAR 124
L AR+G LP P L GP + RG+ +C +L A GT G GAR
Sbjct: 157 LHARFGRLPWPRLLVGPTTLAQEGFLVDTPLARALVARGTEGLCPLLCHADGTPLGAGAR 216
Query: 125 VTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMG------------EPRARLVVPVAV 171
T ++ R + +A AG +G EP +L VP +
Sbjct: 217 ATNPQLAAVLRSAALAPTSDLAGDALLSLLAGDLGVEVPSAVPRPTLEPAEQLPVPQGI 275
>gi|23397572 kelch-like 34 [Homo sapiens]
Length = 644
Score = 31.2 bits (69), Expect = 0.65
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 121 DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVPVAVAAWGVGG 178
D +RV V R+ R + A EARA W G +GE RL +AV G GG
Sbjct: 386 DDSRVVTAQVHRYDPRFHAWTEVPAMREARAHFWCGAVGE---RL---LAVGGLGAGG 437
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 30.8 bits (68), Expect = 0.85
Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 69 PVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTR- 127
P A AA K A++G +P G G VA G G GV LAPG G V
Sbjct: 439 PEAQAAAAAKA---AKYGLVPGVGVAPGVGVAP-GVGVAPGV-GLAPGVGVAPGVGVAPG 493
Query: 128 LSVSRWHRRRGVGRRLLAFAEARARAW---AGGMGEPRARLVVPVAVAAWGVGGMLEGCG 184
+ V+ GV + A+ A+A A G+G L V V V GVG + G G
Sbjct: 494 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 553
Query: 185 YQA 187
A
Sbjct: 554 VGA 556
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 30.8 bits (68), Expect = 0.85
Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 69 PVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTR- 127
P A AA K A++G +P G G VA G G GV LAPG G V
Sbjct: 444 PEAQAAAAAKA---AKYGLVPGVGVAPGVGVAP-GVGVAPGV-GLAPGVGVAPGVGVAPG 498
Query: 128 LSVSRWHRRRGVGRRLLAFAEARARAW---AGGMGEPRARLVVPVAVAAWGVGGMLEGCG 184
+ V+ GV + A+ A+A A G+G L V V V GVG + G G
Sbjct: 499 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 558
Query: 185 YQA 187
A
Sbjct: 559 VGA 561
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 30.8 bits (68), Expect = 0.85
Identities = 41/123 (33%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 69 PVFLAVAAVKLGLRARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTR- 127
P A AA K A++G +P G G VA G G GV LAPG G V
Sbjct: 429 PEAQAAAAAKA---AKYGLVPGVGVAPGVGVAP-GVGVAPGV-GLAPGVGVAPGVGVAPG 483
Query: 128 LSVSRWHRRRGVGRRLLAFAEARARAW---AGGMGEPRARLVVPVAVAAWGVGGMLEGCG 184
+ V+ GV + A+ A+A A G+G L V V V GVG + G G
Sbjct: 484 VGVAPGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLG 543
Query: 185 YQA 187
A
Sbjct: 544 VGA 546
>gi|239747471 PREDICTED: hypothetical protein XP_002347542 [Homo
sapiens]
Length = 134
Score = 30.8 bits (68), Expect = 0.85
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 148 EARARAWAGGMGEPRARLVVPVAVAAWGVGGMLEGCG 184
EA W GG EP+A L+ V W G + G G
Sbjct: 27 EAEVTLWTGGAVEPKAGLLSGAEVTPWAGGAVEPGAG 63
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 89 PPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTRLSVSRWHRRRGVGRRLLAFAE 148
P G L G V G A+ PG GA VT + G+ +
Sbjct: 40 PKAGLLSGAEVTPWAGG------AVEPGAGLVSGAEVTXXAGGAVEPGAGL------LSG 87
Query: 149 ARARAWAGGMGEPRARLVVPVAVAA 173
A +WAGG+ EPRA LV V +
Sbjct: 88 AEVTSWAGGVVEPRAGLVTGTEVTS 112
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 30.8 bits (68), Expect = 0.85
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 112 ALAPGTNAG---DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVP 168
ALAP +G +GAR RW ++ G G + R R G G R R P
Sbjct: 40 ALAPSPVSGVRREGARGGGRGRGRW-KQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPP 98
Query: 169 VAVAAWGVGGMLEGCGYQAEGGWG 192
+ G+GG GCG GG G
Sbjct: 99 SGGS--GLGGDGGGCGGGGSGGGG 120
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 30.8 bits (68), Expect = 0.85
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 112 ALAPGTNAG---DGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVP 168
ALAP +G +GAR RW ++ G G + R R G G R R P
Sbjct: 40 ALAPSPVSGVRREGARGGGRGRGRW-KQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPP 98
Query: 169 VAVAAWGVGGMLEGCGYQAEGGWG 192
+ G+GG GCG GG G
Sbjct: 99 SGGS--GLGGDGGGCGGGGSGGGG 120
>gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo
sapiens]
Length = 333
Score = 30.4 bits (67), Expect = 1.1
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 102 RGSGDVCGVLALAPGTNAGDGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEP 161
RG G V A G+ A + R +R+S W R RG G R RA G G
Sbjct: 184 RGKGGERNVPAGPGGSAAANDLRRSRVSAPVWQRARGRGPR---------RARRSGRGPR 234
Query: 162 RARLVVPVAVAAWGVGGMLEGCGYQAEGGWG 192
R V P + G GG+ E G G G
Sbjct: 235 RGPEVWPRSEE--GPGGLAEVRGGARRSGRG 263
>gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo
sapiens]
Length = 296
Score = 30.4 bits (67), Expect = 1.1
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 102 RGSGDVCGVLALAPGTNAGDGARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEP 161
RG G V A G+ A + R +R+S W R RG G R RA G G
Sbjct: 147 RGKGGERNVPAGPGGSAAANDLRRSRVSAPVWQRARGRGPR---------RARRSGRGPR 197
Query: 162 RARLVVPVAVAAWGVGGMLEGCGYQAEGGWG 192
R V P + G GG+ E G G G
Sbjct: 198 RGPEVWPRSEE--GPGGLAEVRGGARRSGRG 226
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 30.4 bits (67), Expect = 1.1
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 85 WGSLPPPGGLGG-----PWVAVRGSGDVCGVLALAPGTNAGDGARVTRLSVSRWHRRRGV 139
WGS+ GG+GG PW VRG+G G + G AG+ +R ++ W RR
Sbjct: 598 WGSVGAGGGVGGPTGLVPW-GVRGAGSTGGTFS-GLGRAAGELSR-RHWAMKSWARR--- 651
Query: 140 GRRLLAFAEARARAWAGGMGEP 161
R + RA G G P
Sbjct: 652 -ERRPTLPKGRAGVREAGEGLP 672
>gi|153252029 C-type lectin domain family 1, member B isoform a
[Homo sapiens]
Length = 229
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 27 VKDTENRVALHALTRPPALLLLAAASSGLRFVLASFALALLLPVFLAVAAVKLGL 81
++D + + L+ TR PAL+ + +ASS V+A + L+L V + V V LG+
Sbjct: 1 MQDEDGYITLNIKTRKPALISVGSASSSWWRVMA--LILLILCVGMVVGLVALGI 53
>gi|4502683 CD72 molecule [Homo sapiens]
Length = 359
Score = 30.4 bits (67), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 24 KAGVKDTENRVALHALTRPPALLLLAAASSGLRFVLASFALALLLPVFLAVAAVKLGLR 82
KA VK + + A+T P +L ++ LR++L L LL L V A+ LG+R
Sbjct: 62 KAAVKSEQPTASWRAVTSPAVGRILPCRTTCLRYLLLGLLLTCLL---LGVTAICLGVR 117
>gi|40255047 pleckstrin homology domain containing, family H (with
MyTH4 domain) member 3 [Homo sapiens]
Length = 793
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 18/88 (20%)
Query: 89 PPP------GGLGGPWVAVR--------GSGDVCGVLALAPGTNAGDGARVTRLSVSRWH 134
PPP G L P +A R G+G G +A G AG A V + W
Sbjct: 580 PPPSAALLAGALWSPGLAKRRAERARRGGAGRTAGSIAREGGGGAGTAAAV----LGGWK 635
Query: 135 RRRGVGRRLLAFAEARARAWAGGMGEPR 162
R RG+GR A A G G R
Sbjct: 636 RLRGMGRAEAMAAYLALAAQCPGFGAAR 663
>gi|239749936 PREDICTED: similar to single Ig IL-1R-related molecule
[Homo sapiens]
Length = 304
Score = 30.0 bits (66), Expect = 1.4
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 68 LPVFLAVAAVKLGLRA-RWGSLPPPGGLGGPWVAVRG 103
LP A ++ LG RA RW + PPPG W V G
Sbjct: 66 LPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSG 102
>gi|53988380 mesothelin isoform 2 preproprotein [Homo sapiens]
Length = 630
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 159 GEPRARLVVPVAVAAWGV-GGMLEGCGYQAEGGWGC 193
G P + ++P A+A WGV G +L +A GG C
Sbjct: 155 GAPERQRLLPAALACWGVRGSLLSEADVRALGGLAC 190
>gi|53988378 mesothelin isoform 1 preproprotein [Homo sapiens]
Length = 622
Score = 30.0 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 159 GEPRARLVVPVAVAAWGV-GGMLEGCGYQAEGGWGC 193
G P + ++P A+A WGV G +L +A GG C
Sbjct: 155 GAPERQRLLPAALACWGVRGSLLSEADVRALGGLAC 190
>gi|19718780 semaphorin 6B precursor [Homo sapiens]
Length = 888
Score = 30.0 bits (66), Expect = 1.4
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 122 GARVTRLSVSRWHRRRGVGRRLLAFAEARARAWAGGMGEPRARLVVPVAVAAWGVGGMLE 181
GA LSVSR RR G R GG G P L+ P+ W +L+
Sbjct: 643 GAGEAVLSVSRLGERRAQG------PGGRGGGGGGGAGVPPEALLAPLMQNGWAKATLLQ 696
Query: 182 GCGYQAEGG 190
G + + G
Sbjct: 697 GGPHDLDSG 705
>gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [Homo
sapiens]
Length = 365
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 49 AAASSGLRFVLASFALALLLPVFLAVAAVKLGLRARWGSL---PPPGGLGGPWVAVRGSG 105
A + LR L S A + +L V + + + L A G+L GL PW+++R G
Sbjct: 280 AGLAQPLRVELESPAKSSVLVVGIVIGVLLLTAAAVGGALLWRRMRSGLPAPWISLR--G 337
Query: 106 DVCGVLALAPG 116
D GVL PG
Sbjct: 338 DDTGVLLPTPG 348
>gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Homo
sapiens]
Length = 365
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 49 AAASSGLRFVLASFALALLLPVFLAVAAVKLGLRARWGSL---PPPGGLGGPWVAVRGSG 105
A + LR L S A + +L V + + + L A G+L GL PW+++R G
Sbjct: 280 AGLAQPLRVELESPAKSSVLVVGIVIGVLLLTAAAVGGALLWRRMRSGLPAPWISLR--G 337
Query: 106 DVCGVLALAPG 116
D GVL PG
Sbjct: 338 DDTGVLLPTPG 348
>gi|239758008 PREDICTED: hypothetical protein XP_002346266 [Homo
sapiens]
Length = 316
Score = 29.3 bits (64), Expect = 2.5
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 19/105 (18%)
Query: 73 AVAAVKLGL----RARWGSLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTRL 128
A A K GL RWG P G W +G+ CG P A GA+ +
Sbjct: 204 AAAGAKSGLGDKKSRRWGRKKP-----GRWGQEAVAGETCGGGGKKPQKAAAPGAKSHKK 258
Query: 129 SVSRWHRRRGVGRRLLAFAE---------ARARAWAGGMGEPRAR 164
+W ++ + +A AE A ARA +GG G + R
Sbjct: 259 PRRQW-QKAAAEKVAVAGAESCGGRGQKAAAARAKSGGFGGKKQR 302
>gi|10835203 advanced glycosylation end product-specific receptor
isoform 1 precursor [Homo sapiens]
Length = 404
Score = 28.9 bits (63), Expect = 3.2
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 87 SLPPPGGLGGPWVAVRGSGDVCGVLALAPGTNAGDGARVTRLSVSRWHRRRGVGRRLLA- 145
S+ PG G +V GSG G LALA G G G + V W RR+ G A
Sbjct: 319 SIIEPGEEGPTAGSVGGSG--LGTLALALGILGGLGTAALLIGVILWQRRQRRGEERKAP 376
Query: 146 --FAEARARAWAGGMGEPRA 163
E RA EP A
Sbjct: 377 ENQEEEEERAELNQSEEPEA 396
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,625,857
Number of Sequences: 37866
Number of extensions: 406560
Number of successful extensions: 1314
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1291
Number of HSP's gapped (non-prelim): 74
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.