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Search of human proteins with 239048909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239048909 checkpoint with forkhead and ring finger domains
isoform 5 [Homo sapiens]
(572 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239048909 checkpoint with forkhead and ring finger domains is... 1201 0.0
gi|239048907 checkpoint with forkhead and ring finger domains is... 1175 0.0
gi|239048905 checkpoint with forkhead and ring finger domains is... 1098 0.0
gi|239048792 checkpoint with forkhead and ring finger domains is... 963 0.0
gi|239048862 checkpoint with forkhead and ring finger domains is... 957 0.0
gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens] 54 4e-07
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 52 1e-06
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 51 3e-06
gi|31742478 ring finger protein 3 [Homo sapiens] 50 6e-06
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 49 1e-05
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 49 1e-05
gi|109240538 polycomb group ring finger 1 [Homo sapiens] 48 2e-05
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 48 3e-05
gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens] 47 4e-05
gi|57165361 ring finger protein 165 [Homo sapiens] 47 5e-05
gi|30520320 ring finger protein 166 [Homo sapiens] 47 5e-05
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 46 8e-05
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 46 8e-05
gi|187607085 ligand of numb-protein X 1 isoform a [Homo sapiens] 46 8e-05
gi|19923717 deltex 3-like [Homo sapiens] 46 8e-05
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 46 8e-05
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 46 8e-05
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 46 1e-04
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 46 1e-04
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 46 1e-04
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 46 1e-04
gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens] 45 1e-04
gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens] 45 1e-04
gi|7657520 ring finger protein 11 [Homo sapiens] 45 1e-04
gi|31377566 ring finger protein 168 [Homo sapiens] 45 1e-04
>gi|239048909 checkpoint with forkhead and ring finger domains
isoform 5 [Homo sapiens]
Length = 572
Score = 1201 bits (3106), Expect = 0.0
Identities = 572/572 (100%), Positives = 572/572 (100%)
Query: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
Sbjct: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
Query: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHRSGGGG 120
CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHRSGGGG
Sbjct: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHRSGGGG 120
Query: 121 ISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQL 180
ISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQL
Sbjct: 121 ISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQL 180
Query: 181 LVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGW 240
LVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGW
Sbjct: 181 LVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGW 240
Query: 241 MERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQP 300
MERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQP
Sbjct: 241 MERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQP 300
Query: 301 KVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPG 360
KVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPG
Sbjct: 301 KVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPG 360
Query: 361 APQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAV 420
APQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAV
Sbjct: 361 APQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAV 420
Query: 421 CLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWK 480
CLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWK
Sbjct: 421 CLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWK 480
Query: 481 NMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSR 540
NMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSR
Sbjct: 481 NMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSR 540
Query: 541 PDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 572
PDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
Sbjct: 541 PDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 572
>gi|239048907 checkpoint with forkhead and ring finger domains
isoform 4 [Homo sapiens]
Length = 623
Score = 1175 bits (3039), Expect = 0.0
Identities = 571/623 (91%), Positives = 571/623 (91%), Gaps = 51/623 (8%)
Query: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
Sbjct: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
Query: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHR----- 115
CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH
Sbjct: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY 120
Query: 116 ----------------------------------------------SGGGGISPKGSGPS 129
SGGGGISPKGSGPS
Sbjct: 121 ESLSEKQGMTQESFEMVPCCVAQAGLKLLGSSDPPTLASQSIVITGSGGGGISPKGSGPS 180
Query: 130 VASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNA 189
VASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNA
Sbjct: 181 VASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNA 240
Query: 190 QTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPT 249
QTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPT
Sbjct: 241 QTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPT 300
Query: 250 CRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDE 309
CRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDE
Sbjct: 301 CRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDE 360
Query: 310 EGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAP 369
EGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAP
Sbjct: 361 EGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAP 420
Query: 370 STSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLY 429
STSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLY
Sbjct: 421 STSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCHLY 480
Query: 430 WGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVA 489
WGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVA
Sbjct: 481 WGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTESLVA 540
Query: 490 LQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNC 549
LQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNC
Sbjct: 541 LQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCYWGRNC 600
Query: 550 RTQVKAHHAMKFNHICEQTRFKN 572
RTQVKAHHAMKFNHICEQTRFKN
Sbjct: 601 RTQVKAHHAMKFNHICEQTRFKN 623
>gi|239048905 checkpoint with forkhead and ring finger domains
isoform 3 [Homo sapiens]
Length = 652
Score = 1098 bits (2840), Expect = 0.0
Identities = 545/652 (83%), Positives = 547/652 (83%), Gaps = 80/652 (12%)
Query: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
Sbjct: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
Query: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHR----- 115
CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH
Sbjct: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLY 120
Query: 116 ----------------SGGGG-------ISPKGSGPSVASDEVSSFASALPDRKTASFSS 152
SG G + P V +E S TAS SS
Sbjct: 121 ESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCFEEPQPSTSTSDLFPTASASS 180
Query: 153 LEP----------------------------------------------------QDQED 160
EP QDQED
Sbjct: 181 TEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQED 240
Query: 161 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH 220
LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH
Sbjct: 241 LEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLH 300
Query: 221 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS 280
DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS
Sbjct: 301 DCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRS 360
Query: 281 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP 340
EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP
Sbjct: 361 EEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCP 420
Query: 341 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM 400
EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM
Sbjct: 421 EYRRQAAQPPHCPAPEGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPM 480
Query: 401 PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN 460
PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN
Sbjct: 481 PDRRAEREQDPRVAPQQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNN 540
Query: 461 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL 520
NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL
Sbjct: 541 NSYESDILKNYLATRGLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFREL 600
Query: 521 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 572
TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
Sbjct: 601 TYQYRQNIPASELPVAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 652
>gi|239048792 checkpoint with forkhead and ring finger domains
isoform 1 [Homo sapiens]
Length = 664
Score = 963 bits (2490), Expect = 0.0
Identities = 457/457 (100%), Positives = 457/457 (100%)
Query: 116 SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD 175
SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD
Sbjct: 208 SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD 267
Query: 176 LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA 235
LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA
Sbjct: 268 LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA 327
Query: 236 CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ 295
CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ
Sbjct: 328 CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ 387
Query: 296 DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP 355
DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP
Sbjct: 388 DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP 447
Query: 356 EGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP 415
EGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP
Sbjct: 448 EGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP 507
Query: 416 QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR 475
QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR
Sbjct: 508 QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR 567
Query: 476 GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV 535
GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV
Sbjct: 568 GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV 627
Query: 536 AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 572
AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
Sbjct: 628 AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 664
Score = 239 bits (611), Expect = 4e-63
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
Sbjct: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
Query: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH 114
CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH
Sbjct: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH 114
>gi|239048862 checkpoint with forkhead and ring finger domains
isoform 2 [Homo sapiens]
Length = 663
Score = 957 bits (2474), Expect = 0.0
Identities = 456/457 (99%), Positives = 456/457 (99%), Gaps = 1/457 (0%)
Query: 116 SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD 175
SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD
Sbjct: 208 SGGGGISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLD 267
Query: 176 LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA 235
LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA
Sbjct: 268 LNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAA 327
Query: 236 CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ 295
CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ
Sbjct: 328 CYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQ 387
Query: 296 DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP 355
DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP
Sbjct: 388 DMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAP 447
Query: 356 EGEPGAPQALGDAPSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP 415
EGEPGAPQALGDAPSTSVSLTT VQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP
Sbjct: 448 EGEPGAPQALGDAPSTSVSLTT-VQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAP 506
Query: 416 QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR 475
QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR
Sbjct: 507 QQCAVCLQPFCHLYWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATR 566
Query: 476 GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV 535
GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV
Sbjct: 567 GLTWKNMLTESLVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPV 626
Query: 536 AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 572
AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
Sbjct: 627 AVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN 663
Score = 239 bits (611), Expect = 4e-63
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH
Sbjct: 1 MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDH 60
Query: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH 114
CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH
Sbjct: 61 CRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDVIYLVYRKNEPEH 114
>gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]
Length = 485
Score = 53.9 bits (128), Expect = 4e-07
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 180 LLVAQPRRNAQTVHEDVRAAAGKP-------DKMEETLTCIICQDLLHDCVSLQPCMHTF 232
++ A+ + QT E + A K D +E L CIIC + + V+L C H+F
Sbjct: 364 IIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLN-CAHSF 422
Query: 233 CAACYSGWMERSSLCPTCRCPVERICKNHILNNLV 267
C+ C + WM+R CP CR ++ + +L+N +
Sbjct: 423 CSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCI 457
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 52.0 bits (123), Expect = 1e-06
Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 206 MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMER-SSLCPTCRCP 253
+EE LTC IC L D V+L PC H FC AC W +R CP CR P
Sbjct: 6 LEEKLTCAICLGLYQDPVTL-PCGHNFCGACIRDWWDRCGKACPECREP 53
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 50.8 bits (120), Expect = 3e-06
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 201 GKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSG-W-MERSSLCPTC--RCPVER 256
G +E L C +C D D V+L+ C H FC C S W ++ S CP C R
Sbjct: 10 GPSRSFKEELLCAVCYDPFRDAVTLR-CGHNFCRGCVSRCWEVQVSPTCPVCKDRASPAD 68
Query: 257 ICKNHILNNLVEAYLIQHPDKSR 279
+ NH LNNLVE L + + +R
Sbjct: 69 LRTNHTLNNLVEKLLREEAEGAR 91
>gi|31742478 ring finger protein 3 [Homo sapiens]
Length = 242
Score = 50.1 bits (118), Expect = 6e-06
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVER 256
+TC +C L D ++ C+HTFC +C ++E ++ CPTCR + +
Sbjct: 15 ITCRLCSGYLIDATTVTECLHTFCRSCLVKYLEENNTCPTCRIVIHQ 61
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 207 EETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSL---CPTCRCP-------VER 256
++ L C IC D + C + PC+HTFC C ++ SL CP CR V
Sbjct: 17 KQFLVCSICLDR-YQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSA 75
Query: 257 ICKNHILNNLVEAYLIQHPDKSRSEED 283
+ N +++L+EA + Q PD + ED
Sbjct: 76 LQNNFFISSLMEA-MQQAPDGAHDPED 101
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 207 EETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSL---CPTCRCP-------VER 256
++ L C IC D + C + PC+HTFC C ++ SL CP CR V
Sbjct: 17 KQFLVCSICLDR-YQCPKVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSA 75
Query: 257 ICKNHILNNLVEAYLIQHPDKSRSEED 283
+ N +++L+EA + Q PD + ED
Sbjct: 76 LQNNFFISSLMEA-MQQAPDGAHDPED 101
>gi|109240538 polycomb group ring finger 1 [Homo sapiens]
Length = 259
Score = 48.1 bits (113), Expect = 2e-05
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 178 GQLLVAQPRRNA-QTVH--------EDVRAAAGKPDKMEETLTCIICQDLLHDCVSLQPC 228
GQ+ +A RN Q+V+ E+VR K + E + C +C D ++ C
Sbjct: 7 GQIAIAMRLRNQLQSVYKMDPLRNEEEVRV---KIKDLNEHIVCCLCAGYFVDATTITEC 63
Query: 229 MHTFCAACYSGWMERSSLCPTCRC------PVERICKNHILNNLVEAYL--IQHPDKSRS 280
+HTFC +C +++ S CP C P+ + + ++ ++V + +Q ++ R
Sbjct: 64 LHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRI 123
Query: 281 EEDVQSMDARNKITQ 295
E QS +++TQ
Sbjct: 124 REFYQSR-GLDRVTQ 137
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 47.8 bits (112), Expect = 3e-05
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 124 KGSGPSVASDEVSSFASALPDRKTASFSSLEPQD-----QEDLEPVKKKMRGDGDLDLN- 177
K + P E++ F L D S S L + + ++P K + +G ++N
Sbjct: 1042 KTAFPQQTRKELTDFLRKLKDAYGKSLSELTFDEIVCKISQFIDPKKSQSQGKSVSNVNC 1101
Query: 178 -------GQLLVAQPRRNAQTVHEDVRAA----AGKPDKMEETLT-CIIC-QDLLHDCVS 224
Q AQP + A A A PD+ EE C+IC ++L + +S
Sbjct: 1102 VSPSHSPSQPDAAQPPKPAWRPLTSQGPATWEGASNPDEEEEEEEPCVICHENLSPENLS 1161
Query: 225 LQPCMHTFCAACYSGWMERSSLCPTCRCPV 254
+ PC H F A C W+ + CPTCR V
Sbjct: 1162 VLPCAHKFHAQCIRPWLMQQGTCPTCRLHV 1191
>gi|58761530 polycomb group ring finger 6 isoform a [Homo sapiens]
Length = 350
Score = 47.4 bits (111), Expect = 4e-05
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 34/223 (15%)
Query: 121 ISPKGSGPSVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKK--KMRG-----DGD 173
+SP P+ A+ E + L + S P + LEP + + RG D +
Sbjct: 29 VSPPALTPAPAAGEEGP--APLSETGAPGCSGSRPPE---LEPERSLGRFRGRFEDEDEE 83
Query: 174 LDLNGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEET------------LTCIICQDLLHD 221
L+ +L + H +R G+ D +E + C IC+ L D
Sbjct: 84 LEEEEELEEEEEEEEEDMSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLID 143
Query: 222 CVSLQPCMHTFCAACYSGWMERSSLCPTCRC------PVERICKNHILNNLVEAYLIQHP 275
++ C+HTFC +C S+ CP C P+ I + L ++V +I
Sbjct: 144 ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLE 203
Query: 276 DKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLE 318
++ E Q D + ++ +P V + +G S+ +LE
Sbjct: 204 ER----EKKQMHDFYKERGLEVPKPAVPQPVPSSKGRSKKVLE 242
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 47.0 bits (110), Expect = 5e-05
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 201 GKPDKMEETLT---CIICQDLLHDCVSLQ--PCMHTFCAACYSGWMERSSLCPTCRCPVE 255
GK D+ EE+ T C IC +L D ++ PCMH F C W+ S CP CR +E
Sbjct: 280 GKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIE 339
>gi|30520320 ring finger protein 166 [Homo sapiens]
Length = 237
Score = 47.0 bits (110), Expect = 5e-05
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 200 AGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME-RSSLCPTCRCPVE 255
AG +E TC IC ++ H V++ C HTFC C ++ S LCP CR P +
Sbjct: 21 AGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFD 77
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 46.2 bits (108), Expect = 8e-05
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 187 RNAQTVHEDVRAAAGKPDKMEET-LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS 245
RN T++ D P++++ CIIC++ + PC H F +C W +R
Sbjct: 270 RNMNTLYPDAT-----PEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ 324
Query: 246 LCPTCRCPVER 256
CPTCR V R
Sbjct: 325 TCPTCRMDVLR 335
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 46.2 bits (108), Expect = 8e-05
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 187 RNAQTVHEDVRAAAGKPDKMEET-LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS 245
RN T++ D P++++ CIIC++ + PC H F +C W +R
Sbjct: 270 RNMNTLYPDAT-----PEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQ 324
Query: 246 LCPTCRCPVER 256
CPTCR V R
Sbjct: 325 TCPTCRMDVLR 335
>gi|187607085 ligand of numb-protein X 1 isoform a [Homo sapiens]
Length = 728
Score = 46.2 bits (108), Expect = 8e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 203 PDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCP-VERICKNH 261
P+++++ L C IC L D + PC HT+C C + ++ CP R P V + CK
Sbjct: 32 PEEVDDDLICHICLQALLDPLDT-PCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQHCKKS 90
Query: 262 --ILNNLVEAYLIQHPDKSRSEEDVQSMD 288
++N L+ L+ P + + +Q D
Sbjct: 91 SILVNKLLNKLLVTCPFREHCTQVLQRCD 119
>gi|19923717 deltex 3-like [Homo sapiens]
Length = 740
Score = 46.2 bits (108), Expect = 8e-05
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 196 VRAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR 251
V + A + DK E+ + C+IC D + + L C H FCA C + M +CPTC+
Sbjct: 546 VSSEASELDKKEKGI-CVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 600
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 46.2 bits (108), Expect = 8e-05
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR-----CPVER-ICKNHIL 263
L C +C L ++ V+ PC HTFC C ++ ++ CP C+ C R KN I+
Sbjct: 465 LECALCMRLFYEPVTT-PCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 523
Query: 264 NNLVEAYLIQHPDKSRS--EEDVQSMDARNK 292
L+ +L + + R EE+++ + NK
Sbjct: 524 EELIAKFLPEELKERRKLYEEEMEELSNLNK 554
Score = 34.7 bits (78), Expect = 0.24
Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 11/147 (7%)
Query: 111 EPEHRSGGGGISPKGSGPSVASDEVSSFASALPDRKTAS-FSSLEPQDQEDLEPVKKKMR 169
EPE G +P+ V + + AS R+ + L + Q E +++ +R
Sbjct: 53 EPEQEQSPGTSTPESK---VLLTQADALASRGRIREALEVYRQLSERQQLVAEQLEQLVR 109
Query: 170 GDGDLDLNGQLLVAQPRRNAQTV------HEDVRAAAGKPDKMEETLTCIICQDLLHDCV 223
+ G+ L P T E AAA ++ + C C L D V
Sbjct: 110 CLAEKVPQGEALAPAPPDEGSTASGTVAAEETGAAAAAAATEVWDGFKCRKCHGFLSDPV 169
Query: 224 SLQPCMHTFCAACYSGWMERSSLCPTC 250
SL C HTFC C C C
Sbjct: 170 SLS-CGHTFCKLCLERGRAADRRCALC 195
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 46.2 bits (108), Expect = 8e-05
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 210 LTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCR-----CPVER-ICKNHIL 263
L C +C L ++ V+ PC HTFC C ++ ++ CP C+ C R KN I+
Sbjct: 424 LECALCMRLFYEPVTT-PCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIM 482
Query: 264 NNLVEAYLIQHPDKSRS--EEDVQSMDARNK 292
L+ +L + + R EE+++ + NK
Sbjct: 483 EELIAKFLPEELKERRKLYEEEMEELSNLNK 513
Score = 34.7 bits (78), Expect = 0.24
Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 11/147 (7%)
Query: 111 EPEHRSGGGGISPKGSGPSVASDEVSSFASALPDRKTAS-FSSLEPQDQEDLEPVKKKMR 169
EPE G +P+ V + + AS R+ + L + Q E +++ +R
Sbjct: 53 EPEQEQSPGTSTPESK---VLLTQADALASRGRIREALEVYRQLSERQQLVAEQLEQLVR 109
Query: 170 GDGDLDLNGQLLVAQPRRNAQTV------HEDVRAAAGKPDKMEETLTCIICQDLLHDCV 223
+ G+ L P T E AAA ++ + C C L D V
Sbjct: 110 CLAEKVPQGEALAPAPPDEGSTASGTVAAEETGAAAAAAATEVWDGFKCRKCHGFLSDPV 169
Query: 224 SLQPCMHTFCAACYSGWMERSSLCPTC 250
SL C HTFC C C C
Sbjct: 170 SLS-CGHTFCKLCLERGRAADRRCALC 195
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 206 MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME---RSSL-------CPTCR---- 251
+EE LTC IC L D L PC H FC C G +E R+SL CPTCR
Sbjct: 7 LEEDLTCPICCSLFDDPRVL-PCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 65
Query: 252 -CPVERICKNHILNNLVEAY 270
+ + N+ L +VE Y
Sbjct: 66 ATGINSLQVNYSLKGIVEKY 85
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 206 MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME---RSSL-------CPTCR---- 251
+EE LTC IC L D L PC H FC C G +E R+SL CPTCR
Sbjct: 4 LEEDLTCPICCSLFDDPRVL-PCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 62
Query: 252 -CPVERICKNHILNNLVEAY 270
+ + N+ L +VE Y
Sbjct: 63 ATGINSLQVNYSLKGIVEKY 82
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 206 MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME---RSSL-------CPTCR---- 251
+EE LTC IC L D L PC H FC C G +E R+SL CPTCR
Sbjct: 4 LEEDLTCPICCSLFDDPRVL-PCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 62
Query: 252 -CPVERICKNHILNNLVEAY 270
+ + N+ L +VE Y
Sbjct: 63 ATGINSLQVNYSLKGIVEKY 82
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/80 (38%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 206 MEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWME---RSSL-------CPTCR---- 251
+EE LTC IC L D L PC H FC C G +E R+SL CPTCR
Sbjct: 4 LEEDLTCPICCSLFDDPRVL-PCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKETS 62
Query: 252 -CPVERICKNHILNNLVEAY 270
+ + N+ L +VE Y
Sbjct: 63 ATGINSLQVNYSLKGIVEKY 82
>gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens]
Length = 210
Score = 45.4 bits (106), Expect = 1e-04
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 207 EETLTCIICQDLLHDCVSLQPCMHTFCAACYSG-WMERSS---LCPTCR---CPVERICK 259
E+ L CIICQ LL D + PC H+FC C W R + CPTCR + K
Sbjct: 16 EDDLGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRK 74
Query: 260 NHILNNLVEAY 270
N +L +L + Y
Sbjct: 75 NTLLQDLADKY 85
>gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens]
Length = 432
Score = 45.4 bits (106), Expect = 1e-04
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 207 EETLTCIICQDLLHDCVSLQPCMHTFCAACYSG-WMERSS---LCPTCR---CPVERICK 259
E+ L CIICQ LL D + PC H+FC C W R + CPTCR + K
Sbjct: 16 EDDLGCIICQGLL-DWPATLPCGHSFCRHCLEALWGARDARRWACPTCRQGAAQQPHLRK 74
Query: 260 NHILNNLVEAY 270
N +L +L + Y
Sbjct: 75 NTLLQDLADKY 85
>gi|7657520 ring finger protein 11 [Homo sapiens]
Length = 154
Score = 45.4 bits (106), Expect = 1e-04
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 129 SVASDEVSSFASALPDRKTASFSSLEPQDQEDLEPVKKKM------------RGDGDLDL 176
S SD++S + DR ASF DQE P ++++ R L
Sbjct: 7 SPTSDDISLLHESQSDR--ASFGEGTEPDQEPPPPYQEQVPVPVYHPTPSQTRLATQLTE 64
Query: 177 NGQLLVAQPRRNAQTVHEDVRAAAGKPDKMEETLTCIICQ-DLLH-DCVSLQPCMHTFCA 234
Q+ +AQ Q + + V G+ ++ C+IC D ++ D + PCMH +
Sbjct: 65 EEQIRIAQRIGLIQHLPKGVYDP-GRDGSEKKIRECVICMMDFVYGDPIRFLPCMHIYHL 123
Query: 235 ACYSGWMERSSLCPTCRCPVE 255
C W+ RS CP+C PV+
Sbjct: 124 DCIDDWLMRSFTCPSCMEPVD 144
>gi|31377566 ring finger protein 168 [Homo sapiens]
Length = 571
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 212 CIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSL-CPTCRCPVERICKNHILNNL---V 267
C IC ++L + V+L PC HT C C+ +E++SL CP CR V + H N V
Sbjct: 16 CGICMEILVEPVTL-PCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNV 74
Query: 268 EAYLIQHPDKSRSEEDVQSMDARNKITQDMLQP--------KVRRSFSDEEGSSEDLLEL 319
E + I R E +++ ++ D QP ++RR + EE S+ E
Sbjct: 75 ELWTIIQKHYPR-ECKLRASGQESEEVADDYQPVRLLSKPGELRREY--EEEISKVAAER 131
Query: 320 SDVDSESSDISQPYV---VCRQCPEYRRQA 346
+ E + S+ Y+ + + E +RQA
Sbjct: 132 RASEEEENKASEEYIQRLLAEEEEEEKRQA 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,347,762
Number of Sequences: 37866
Number of extensions: 1287770
Number of successful extensions: 6341
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 6060
Number of HSP's gapped (non-prelim): 444
length of query: 572
length of database: 18,247,518
effective HSP length: 108
effective length of query: 464
effective length of database: 14,157,990
effective search space: 6569307360
effective search space used: 6569307360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.