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Search of human proteins with 238859655
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
(519 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens] 1057 0.0
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 64 3e-10
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 60 5e-09
gi|5453958 protein phosphatase 5, catalytic subunit [Homo sapiens] 56 9e-08
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 51 2e-06
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 51 2e-06
gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens] 50 7e-06
gi|24308141 small glutamine-rich tetratricopeptide repeat (TPR)-... 50 7e-06
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 49 1e-05
gi|196259776 peroxisomal biogenesis factor 5 isoform d [Homo sap... 48 2e-05
gi|196259774 peroxisomal biogenesis factor 5 isoform d [Homo sap... 48 2e-05
gi|196259772 peroxisomal biogenesis factor 5 isoform c [Homo sap... 48 2e-05
gi|196259770 peroxisomal biogenesis factor 5 isoform a [Homo sap... 48 2e-05
gi|21361204 peroxisomal biogenesis factor 5 isoform b [Homo sapi... 48 2e-05
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 47 6e-05
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 46 7e-05
gi|225735593 RNA polymerase II associated protein 3 isoform 2 [H... 45 2e-04
gi|225735591 RNA polymerase II associated protein 3 isoform 1 [H... 45 2e-04
gi|54607135 translocase of outer mitochondrial membrane 70 homol... 44 3e-04
gi|7706671 peroxisomal biogenesis factor 5-like [Homo sapiens] 44 5e-04
gi|148746195 trichohyalin [Homo sapiens] 43 6e-04
gi|7110679 tetratricopeptide repeat domain 33 [Homo sapiens] 43 6e-04
gi|29725607 smooth muscle cell associated protein-1 isoform 2 [H... 43 8e-04
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 42 0.001
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 42 0.001
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 42 0.001
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 42 0.001
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 42 0.001
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 42 0.001
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 42 0.001
>gi|238859655 tetratricopeptide repeat domain 31 [Homo sapiens]
Length = 519
Score = 1057 bits (2734), Expect = 0.0
Identities = 519/519 (100%), Positives = 519/519 (100%)
Query: 1 MAPIPKTVGRIKLDCSLRPSCPLEVAAAPKLCKEFGPEDYGEEDIVDFLRRLVESDPQGL 60
MAPIPKTVGRIKLDCSLRPSCPLEVAAAPKLCKEFGPEDYGEEDIVDFLRRLVESDPQGL
Sbjct: 1 MAPIPKTVGRIKLDCSLRPSCPLEVAAAPKLCKEFGPEDYGEEDIVDFLRRLVESDPQGL 60
Query: 61 HRIHVDGSSGRLQLWHHDYLLGHLDDEGKSTGQSDRGKGAEGLGTYCGLRKSFLYPPQES 120
HRIHVDGSSGRLQLWHHDYLLGHLDDEGKSTGQSDRGKGAEGLGTYCGLRKSFLYPPQES
Sbjct: 61 HRIHVDGSSGRLQLWHHDYLLGHLDDEGKSTGQSDRGKGAEGLGTYCGLRKSFLYPPQES 120
Query: 121 EPCPQSPSASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLK 180
EPCPQSPSASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLK
Sbjct: 121 EPCPQSPSASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLK 180
Query: 181 KKRQKERKRQERLEQYCGEPKASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSL 240
KKRQKERKRQERLEQYCGEPKASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSL
Sbjct: 181 KKRQKERKRQERLEQYCGEPKASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSL 240
Query: 241 ALRKVGDWPLSARREKGLNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAA 300
ALRKVGDWPLSARREKGLNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAA
Sbjct: 241 ALRKVGDWPLSARREKGLNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAA 300
Query: 301 ALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALA 360
ALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALA
Sbjct: 301 ALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALA 360
Query: 361 DAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARELRSCLLHLT 420
DAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARELRSCLLHLT
Sbjct: 361 DAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARELRSCLLHLT 420
Query: 421 LQGQRGGICAPPLSPGALQPLPHAELAPSGLPSLRCPRSTALRSPGLSPLLHYPSCHRSH 480
LQGQRGGICAPPLSPGALQPLPHAELAPSGLPSLRCPRSTALRSPGLSPLLHYPSCHRSH
Sbjct: 421 LQGQRGGICAPPLSPGALQPLPHAELAPSGLPSLRCPRSTALRSPGLSPLLHYPSCHRSH 480
Query: 481 PNQPLSQTQSRRPHPLKPQDPSKGWDILGLGLQHLSQAR 519
PNQPLSQTQSRRPHPLKPQDPSKGWDILGLGLQHLSQAR
Sbjct: 481 PNQPLSQTQSRRPHPLKPQDPSKGWDILGLGLQHLSQAR 519
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 64.3 bits (155), Expect = 3e-10
Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 263 QGRGLALQKMGQEEESPPREER-PQQSPKV--QASPGLLAAALQQSQELAKLGTSFAQNG 319
QG A + +E ESPP P Q SP + + E + +G
Sbjct: 13 QGPTPARSRRRREPESPPASAPIPLFGADTIGQRSPDGPVLSKAEFVEKVRQSNQACHDG 72
Query: 320 FYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRL 379
+H A+VL+ +AL ++PQ+ L+ NRS + ++ Q AL DA A L P WP+ FR
Sbjct: 73 DFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQ 132
Query: 380 GKALMGLQRFREAAAVFQETL 400
G AL L R +A A F L
Sbjct: 133 GVALQYLGRHADALAAFASGL 153
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 60.1 bits (144), Expect = 5e-09
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 302 LQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALAD 361
++Q EL + G G +A+ +++A+KL+P +H L+ NRS + + G A D
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYED 60
Query: 362 AQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLR 401
+ L+P W +G R AL L RF EA ++E L+
Sbjct: 61 GCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLK 100
Score = 60.1 bits (144), Expect = 5e-09
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 275 EEESPPREERPQQSPKVQASPGLLA-----AALQQSQELAKLGTSFAQNGFYHEAVVLFT 329
E +P ++ QQ+ K+ LA AL++ + G Q G Y +A+ +T
Sbjct: 329 EHRTPDVLKKCQQAEKILKEQERLAYINPDLALEEKNK----GNECFQKGDYPQAMKHYT 384
Query: 330 QALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRF 389
+A+K NP+D +L+ NR+ C+ +L + AL D + + L P + +G R AL ++ +
Sbjct: 385 EAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDY 444
Query: 390 REAAAVFQETL-RGGSQPDAARELRSCLL 417
+A V+Q+ L S +AA + C++
Sbjct: 445 TKAMDVYQKALDLDSSCKEAADGYQRCMM 473
>gi|5453958 protein phosphatase 5, catalytic subunit [Homo sapiens]
Length = 499
Score = 55.8 bits (133), Expect = 9e-08
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 279 PPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQD 338
PPR+E P AL++++EL + + Y A+ ++QA++LNP +
Sbjct: 14 PPRDEPPADG------------ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN 61
Query: 339 HRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQE 398
+GNRS + R +AL DA A+ L + +G +R + M L +FR A ++
Sbjct: 62 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYET 121
Query: 399 TLR 401
++
Sbjct: 122 VVK 124
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 324 AVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKAL 383
A++ +T+A++ P+++ L+GNR+ C R GQ AL D + A L+ WP+G +R AL
Sbjct: 250 AIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATILKNTWPKGHYRYCDAL 309
Query: 384 MGLQRF 389
L +
Sbjct: 310 SMLGEY 315
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 324 AVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKAL 383
A++ +T+A++ P+++ L+GNR+ C R GQ AL D + A L+ WP+G +R AL
Sbjct: 250 AIIYYTRAIEYRPENYLLYGNRALCFLRTGQFRNALGDGKRATILKNTWPKGHYRYCDAL 309
Query: 384 MGLQRF 389
L +
Sbjct: 310 SMLGEY 315
>gi|4506921 small glutamine-rich tetratricopeptide [Homo sapiens]
Length = 313
Score = 49.7 bits (117), Expect = 7e-06
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 286 QQSPKVQASPGLLAAALQQSQELAKLGTSFAQN---GFYHEAVVLFTQALKLNPQDHRLF 342
++ P+ SP + + S E +L T + + AV + +A++LNP + F
Sbjct: 69 KEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYF 128
Query: 343 GNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETL 400
NR+ + +LG A A+ D + A+ + P + + R+G AL L + EA A +++ L
Sbjct: 129 CNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKAL 186
>gi|24308141 small glutamine-rich tetratricopeptide repeat
(TPR)-containing, beta [Homo sapiens]
Length = 304
Score = 49.7 bits (117), Expect = 7e-06
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 304 QSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQ 363
++ +L G + + Y AV +TQA++L+P + + NR+ +LG A+ D +
Sbjct: 84 KADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCE 143
Query: 364 VALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETL 400
A+ + + + R+G AL L +F EA +Q+ L
Sbjct: 144 KAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKAL 180
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 48.5 bits (114), Expect = 1e-05
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 264 GRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHE 323
GR ++ GQ+ P R + PG A+ +L G +
Sbjct: 207 GRARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARAS-----QLRHEGNRLYRERQVEA 261
Query: 324 AVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKAL 383
A++ + +A+KL P DH L+ NRS + L AL DA++A LRP + FR +AL
Sbjct: 262 ALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDAEIACKLRPMGFKAHFRKAQAL 321
Query: 384 MGLQRFREAAAVF 396
L + EA F
Sbjct: 322 ATLGKVEEALREF 334
>gi|196259776 peroxisomal biogenesis factor 5 isoform d [Homo
sapiens]
Length = 639
Score = 48.1 bits (113), Expect = 2e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 311 LGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRP 370
LG F +G Y +AV FT AL + P D+ L+ Q A+A + AL L+P
Sbjct: 494 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 553
Query: 371 GWPRGLFRLGKALMGLQRFREAAAVFQETL 400
G+ R + LG + + L REA F E L
Sbjct: 554 GYIRSRYNLGISCINLGAHREAVEHFLEAL 583
>gi|196259774 peroxisomal biogenesis factor 5 isoform d [Homo
sapiens]
Length = 639
Score = 48.1 bits (113), Expect = 2e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 311 LGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRP 370
LG F +G Y +AV FT AL + P D+ L+ Q A+A + AL L+P
Sbjct: 494 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 553
Query: 371 GWPRGLFRLGKALMGLQRFREAAAVFQETL 400
G+ R + LG + + L REA F E L
Sbjct: 554 GYIRSRYNLGISCINLGAHREAVEHFLEAL 583
>gi|196259772 peroxisomal biogenesis factor 5 isoform c [Homo
sapiens]
Length = 602
Score = 48.1 bits (113), Expect = 2e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 311 LGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRP 370
LG F +G Y +AV FT AL + P D+ L+ Q A+A + AL L+P
Sbjct: 457 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 516
Query: 371 GWPRGLFRLGKALMGLQRFREAAAVFQETL 400
G+ R + LG + + L REA F E L
Sbjct: 517 GYIRSRYNLGISCINLGAHREAVEHFLEAL 546
>gi|196259770 peroxisomal biogenesis factor 5 isoform a [Homo
sapiens]
Length = 654
Score = 48.1 bits (113), Expect = 2e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 311 LGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRP 370
LG F +G Y +AV FT AL + P D+ L+ Q A+A + AL L+P
Sbjct: 509 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 568
Query: 371 GWPRGLFRLGKALMGLQRFREAAAVFQETL 400
G+ R + LG + + L REA F E L
Sbjct: 569 GYIRSRYNLGISCINLGAHREAVEHFLEAL 598
>gi|21361204 peroxisomal biogenesis factor 5 isoform b [Homo
sapiens]
Length = 631
Score = 48.1 bits (113), Expect = 2e-05
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 311 LGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRP 370
LG F +G Y +AV FT AL + P D+ L+ Q A+A + AL L+P
Sbjct: 486 LGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQP 545
Query: 371 GWPRGLFRLGKALMGLQRFREAAAVFQETL 400
G+ R + LG + + L REA F E L
Sbjct: 546 GYIRSRYNLGISCINLGAHREAVEHFLEAL 575
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 46.6 bits (109), Expect = 6e-05
Identities = 28/82 (34%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 116 PPQESEPCPQSPSASATFPSVSDSLLQVAMPQKLL-----VTEEEANRLAEELVAEEERM 170
PP+E SP+ ++ P++ SLL V +P+KL V E+E + +E ++E+
Sbjct: 657 PPKELALPLFSPATASRVPAMLPSLLPV-LPEKLFEEKEKVKEKEKKKDKKEKKKKKEKE 715
Query: 171 KQKAEKKRLKKKRQKERKRQER 192
K+K EK+R K+KR++E++ +E+
Sbjct: 716 KEKKEKEREKEKREREKREKEK 737
Score = 32.0 bits (71), Expect = 1.4
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 109 LRKSFLYPPQESEPCPQSPSASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEELVAEEE 168
+RK+ L P P FP +S + P+ L EE +L V ++
Sbjct: 474 VRKAKLGTPSNMPP---------NFPYISSPSVSPPTPEPLHKVYEEKTKLPSS-VEVKK 523
Query: 169 RMKQKAEKKRLKKKRQKERKRQE 191
++K++ + K KK++Q++R+R++
Sbjct: 524 KLKKELKTKMKKKEKQRDREREK 546
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 46.2 bits (108), Expect = 7e-05
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 301 ALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALA 360
A ++++ + G ++ Y+EA +T+A+ + P++ +GNR+ LG+ AL
Sbjct: 24 AKREAETFKEQGNAYYAKKDYNEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALG 83
Query: 361 DAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETL 400
DAQ ++ L + RG R GK + L A FQ L
Sbjct: 84 DAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRAL 123
>gi|225735593 RNA polymerase II associated protein 3 isoform 2 [Homo
sapiens]
Length = 631
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 303 QQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADA 362
Q++ L + G + + G Y EA+ +T+ + +P + L NR+ + RL + A A +D
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDC 190
Query: 363 QVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLR-GGSQPDAARELR 413
+A+ L + + R G A LQ+ EA ++ L + +A ELR
Sbjct: 191 NLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELR 242
>gi|225735591 RNA polymerase II associated protein 3 isoform 1 [Homo
sapiens]
Length = 665
Score = 45.1 bits (105), Expect = 2e-04
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 303 QQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADA 362
Q++ L + G + + G Y EA+ +T+ + +P + L NR+ + RL + A A +D
Sbjct: 131 QKALVLKEKGNKYFKQGKYDEAIDCYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDC 190
Query: 363 QVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLR-GGSQPDAARELR 413
+A+ L + + R G A LQ+ EA ++ L + +A ELR
Sbjct: 191 NLAVALNRSYTKAYSRRGAARFALQKLEEAKKDYERVLELEPNNFEATNELR 242
Score = 30.8 bits (68), Expect = 3.1
Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 28/155 (18%)
Query: 321 YHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLG 380
Y EA TQA+ L+ + F R LG+ A D + L L PG
Sbjct: 332 YEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPG--------- 382
Query: 381 KALMGLQRFREAAAVFQETLRGGSQPDAARELRSCLLHLTLQGQRGGICAP---PLSPGA 437
Q E + + +E + G D + QR + P P PG+
Sbjct: 383 ----NKQAVTELSKIKKELIEKGHWDDVFLD----------STQRQNVVKPIDNPPHPGS 428
Query: 438 LQPLPHAELAPSG--LPSLRCPRSTALRSPGLSPL 470
+PL + +G + ++ P ST +P +P+
Sbjct: 429 TKPLKKVIIEETGNLIQTIDVPDSTTAAAPENNPI 463
>gi|54607135 translocase of outer mitochondrial membrane 70 homolog
A [Homo sapiens]
Length = 608
Score = 44.3 bits (103), Expect = 3e-04
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 248 WPLSARREKGLNQEPQGRGLALQ-KMGQEEESPPREERPQQSPKVQASPG--LLAAALQQ 304
W RR +E +GRG A K E ++P P PG L +L +
Sbjct: 59 WSRQQRR-----REARGRGDASGLKRNSERKTPEGRASPAPGSGHPEGPGAHLDMNSLDR 113
Query: 305 SQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRL-----FGNRSFCHERLGQPAWAL 359
+Q G + + G Y +A+ +T+A+ L P + + + NR+ E+L +
Sbjct: 114 AQAAKNKGNKYFKAGKYEQAIQCYTEAISLCPTEKNVDLSTFYQNRAAAFEQLQKWKEVA 173
Query: 360 ADAQVALTLRPGWPRGLFRLGKALMGLQRFRE 391
D A+ L P + + LFR KA L +E
Sbjct: 174 QDCTKAVELNPKYVKALFRRAKAHEKLDNKKE 205
>gi|7706671 peroxisomal biogenesis factor 5-like [Homo sapiens]
Length = 626
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 6/149 (4%)
Query: 258 LNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAK------L 311
+ Q P+ + L K G + + P S ++ L A Q+ ++ L
Sbjct: 421 IKQNPKYKYLVKSKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGL 480
Query: 312 GTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPG 371
G F +G ++ A+ F AL + P+D+ L+ + A+ AL ++PG
Sbjct: 481 GVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPG 540
Query: 372 WPRGLFRLGKALMGLQRFREAAAVFQETL 400
+ R + LG + + L +REA + F L
Sbjct: 541 FIRSRYNLGISCINLGAYREAVSNFLTAL 569
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 43.1 bits (100), Expect = 6e-04
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 142 QVAMPQKLLVTEEEA---------NRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQER 192
Q+ Q+LL EEE R +E EE Q+ E++ L+++R+K R+RQER
Sbjct: 898 QLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREK-RRRQER 956
Query: 193 LEQYCGEPKASTTSDG--DESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPL 250
QY + K + E P + + EEE+ L++ + L
Sbjct: 957 ERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEE------------LQQEEEQLL 1004
Query: 251 SARREKGLNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQE 307
REK QE + + ++ QEEE REER ++ + + LQQ +E
Sbjct: 1005 REEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEE 1061
Score = 38.5 bits (88), Expect = 0.015
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 138 DSLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYC 197
+ LL+ ++ L E R EEL EEE++ + + R +++ +++ +++E L+Q
Sbjct: 1031 EQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQ-- 1088
Query: 198 GEPKASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKG 257
E + E P + QC EEE+ L++ + L REK
Sbjct: 1089 -EEEQLLR----EEPEKRRRQERERQCREEEE------------LQQEEEQLLREEREKR 1131
Query: 258 LNQEPQGRGLALQKMGQEEESPPREE 283
QE + + +++ QEEE REE
Sbjct: 1132 RRQELERQYREEEEVQQEEEQLLREE 1157
Score = 35.0 bits (79), Expect = 0.17
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 153 EEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKASTTSDGDESP 212
+EE + EL EEE+++ K E++ L+++RQ+E ++Q+RL + E + + +
Sbjct: 261 QEEEPQRQRELQEEEEQLR-KLERQELRRERQEEEQQQQRLRR---EQQLRRKQEEERRE 316
Query: 213 PSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGRGLALQKM 272
Q + ++E+ RRE+ L +E + R +
Sbjct: 317 QQEERREQQERREQQEE-----------------------RREQQLRREQEERREQQLRR 353
Query: 273 GQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAK 310
QEEE ++ R +Q + + L++ Q+L +
Sbjct: 354 EQEEERREQQLRREQEEERREQQLRREQQLRREQQLRR 391
Score = 35.0 bits (79), Expect = 0.17
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 147 QKLLVTEEEANRLAEELVAEEE-RMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKASTT 205
++ L +EE RL + L +E++ R +Q+ +++L K+ +++R QER EQ K
Sbjct: 516 EQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQ---RLKREQE 572
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQ---EP 262
D+ Q E+E+ L+ L +V RRE+ L + E
Sbjct: 573 ERRDQLLKREEERRQQRLKREQEERLE-----QRLKREEVERLEQEERREQRLKREEPEE 627
Query: 263 QGRGLALQKMGQEEESPPREERPQQSPKVQ 292
+ R L+ QEE + R QQ + Q
Sbjct: 628 ERRQQLLKSEEQEERRQQQLRREQQERREQ 657
Score = 33.9 bits (76), Expect = 0.37
Identities = 13/56 (23%), Positives = 37/56 (66%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKA 202
++ T+E++ R +EL EEE+ +++ +++L+++ + ++++E+ + GE K+
Sbjct: 1848 EEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRRQQKEEQRHRQVGEIKS 1903
Score = 33.1 bits (74), Expect = 0.63
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 28/183 (15%)
Query: 147 QKLLVTEEEANRLAEELVAEE-ERMKQKAEK--------KRLKKKRQKERKRQERLEQYC 197
Q+LL +EE+ R ++L E+ ER +Q+ ++ +RLK++ ++ER+ QE E+
Sbjct: 631 QQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQ 690
Query: 198 GEPK-------------ASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRK 244
+ + + +D +S S +GQ +E L
Sbjct: 691 EQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESEL---- 746
Query: 245 VGDWPLSARREKGLNQEPQGRGLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQ 304
W R + +E Q R Q +E+ R+ + P + L A +Q
Sbjct: 747 --QWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQ 804
Query: 305 SQE 307
+E
Sbjct: 805 QRE 807
Score = 33.1 bits (74), Expect = 0.63
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 154 EEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERL----EQYCGEPKASTTSDGD 209
E R +EL EEE++ ++ +KR ++R+++ + +E L EQ GE + +
Sbjct: 1017 ERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQ-- 1074
Query: 210 ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGRGLAL 269
++ Q +EE+ L++ + L EK QE + +
Sbjct: 1075 ---------ELERQYRKEEE------------LQQEEEQLLREEPEKRRRQERERQCREE 1113
Query: 270 QKMGQEEESPPREERPQQ 287
+++ QEEE REER ++
Sbjct: 1114 EELQQEEEQLLREEREKR 1131
Score = 32.7 bits (73), Expect = 0.82
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 153 EEEANRLAEELVAEEERMKQKAEKKR--LKKKRQKERKRQERLEQ 195
EEE + E E+R+K++ E++R LK++ + ER QER +Q
Sbjct: 430 EEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQ 474
Score = 32.3 bits (72), Expect = 1.1
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 161 EELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEP------KASTTSDGDESPPS 214
EE EE+ +++ + R K + +K+++R+ER ++ E K T +E
Sbjct: 202 EEFPDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQ 261
Query: 215 SPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPL-SARREKGLNQEPQGRGLALQKMG 273
Q + EEE+ LRK+ L R+E+ Q+ R L++
Sbjct: 262 EEEPQRQRELQEEEEQ-----------LRKLERQELRRERQEEEQQQQRLRREQQLRRKQ 310
Query: 274 QEEESPPREERPQQSPKVQASPGLLAAALQQSQE 307
+EE +EER +Q + + L++ QE
Sbjct: 311 EEERREQQEERREQQERREQQEERREQQLRREQE 344
Score = 32.3 bits (72), Expect = 1.1
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKR-QERLEQ 195
Q+ L EEE R E ER +++ +++RL++++Q RK+ +ER EQ
Sbjct: 268 QRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQ 317
Score = 32.0 bits (71), Expect = 1.4
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 154 EEANRLAEELVAEEER-MKQKAEKKRLKKKRQ----KERKRQERLEQYCGEPKAS 203
E R EEL EEE+ ++++ EK+R +++RQ +E +RQ+R ++Y E + S
Sbjct: 1167 ERQYREEEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRS 1221
Score = 31.6 bits (70), Expect = 1.8
Identities = 13/46 (28%), Positives = 29/46 (63%)
Query: 150 LVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQ 195
L ++E R L EEE +++ E++ + +R++E +R++RL++
Sbjct: 476 LKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKR 521
Score = 31.2 bits (69), Expect = 2.4
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKR-QERLEQYCGEPKASTT 205
+K+L E+ E+ + +ER ++ E+++L+++R++++ R QE ++ E +
Sbjct: 1747 RKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQE 1806
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+ + P G+ EE+ L L LR+ D A E+ QE R
Sbjct: 1807 REEQQLRPQQR----DGKYRWEEEQLQLEEQ--EQRLRQERDRQYRA-EEQFATQEKSRR 1859
Query: 266 GLALQKMGQEEESPPREERPQQ 287
Q++ QEEE R+ER ++
Sbjct: 1860 --EEQELWQEEEQKRRQERERK 1879
Score = 30.8 bits (68), Expect = 3.1
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 142 QVAMPQKLLVTEEEANRLAEEL---VAEEERMKQKAEKKRLKKKRQKERKRQERLEQY 196
+V ++ L+ EE R +EL EEE ++Q+ E+ + ++E++RQER QY
Sbjct: 1145 EVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLL---REEQEKRRQERERQY 1199
Score = 30.0 bits (66), Expect = 5.3
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 153 EEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQE 191
EEE E+ A+ K + EK+ L+++R+++R+RQE
Sbjct: 1295 EEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQE 1333
Score = 30.0 bits (66), Expect = 5.3
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 21/153 (13%)
Query: 138 DSLLQVAMPQKLLVTEEEANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYC 197
+ LLQ Q L E + EEL +E+ K E++RL+++ ++ + +E + C
Sbjct: 1342 EQLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRC 1401
Query: 198 GEPKASTTSDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARRE-- 255
E + D D + EEE L RK + RR+
Sbjct: 1402 QEREQQLRQDRDR------------KFREEEQQLSRQERD-----RKFREEEQQVRRQER 1444
Query: 256 --KGLNQEPQGRGLALQKMGQEEESPPREERPQ 286
K L +E Q R +K +EE+ E Q
Sbjct: 1445 ERKFLEEEQQLRQERHRKFREEEQLLQEREEQQ 1477
Score = 29.3 bits (64), Expect = 9.1
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 142 QVAMPQKLLVTEEEANRLAEEL---VAEEERMKQKAEKKRLKKKRQKERKRQERLEQY 196
++ ++ L+ EE R +EL EEE ++Q E+++L ++ ++R+RQE QY
Sbjct: 1115 ELQQEEEQLLREEREKRRRQELERQYREEEEVQQ--EEEQLLREEPEKRRRQELERQY 1170
>gi|7110679 tetratricopeptide repeat domain 33 [Homo sapiens]
Length = 262
Score = 43.1 bits (100), Expect = 6e-04
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 297 LLAAALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPA 356
LL ++S++L G S A+N Y EA+ + +AL+L P D L+ +S L +
Sbjct: 51 LLEGCAEKSKQLKDEGASLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMF 110
Query: 357 WALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETL 400
A+ A++A+ P LG+A +GL A FQ L
Sbjct: 111 PAVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVAL 154
>gi|29725607 smooth muscle cell associated protein-1 isoform 2 [Homo
sapiens]
Length = 944
Score = 42.7 bits (99), Expect = 8e-04
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 293 ASPGLLAAALQQSQELAKLGTSFAQNGFYHEAVVLFTQALKLN--PQDHR-LFGNRSFCH 349
A+PG A++++Q L K G + G Y A+ +TQAL L+ PQD L NR+ CH
Sbjct: 14 ATPG--ASSVEQ---LRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACH 68
Query: 350 ERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAA-------------AVF 396
+L A +A A+ G + L+R +AL L R +A VF
Sbjct: 69 LKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVF 128
Query: 397 QETLR--GGSQPDAARELRS 414
QE LR GG + R + S
Sbjct: 129 QEALRNIGGQIQEKVRYMSS 148
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1991 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2050
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2051 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2101
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2102 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2156
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2157 LRQKQAADAEMEKHKKFAEQT 2177
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1954 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 2013
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 2014 LKAKVEEARRLRERAEQ 2030
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1844 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1901
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1902 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1961
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1962 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 2021
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2022 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2081
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2082 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2136
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1995 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2054
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2055 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2105
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2106 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2160
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2161 LRQKQAADAEMEKHKKFAEQT 2181
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1958 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 2017
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 2018 LKAKVEEARRLRERAEQ 2034
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1848 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1905
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1906 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1965
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1966 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 2025
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2026 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2085
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2086 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2140
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1991 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2050
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2051 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2101
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2102 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2156
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2157 LRQKQAADAEMEKHKKFAEQT 2177
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1954 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 2013
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 2014 LKAKVEEARRLRERAEQ 2030
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1844 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1901
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1902 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1961
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1962 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 2021
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2022 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2081
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2082 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2136
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1959 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2018
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2019 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2069
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2070 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2124
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2125 LRQKQAADAEMEKHKKFAEQT 2145
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1922 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 1981
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 1982 LKAKVEEARRLRERAEQ 1998
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1812 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1869
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1870 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1929
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1930 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 1989
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 1990 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2049
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2050 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2104
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 2128 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2187
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2188 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2238
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2239 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2293
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2294 LRQKQAADAEMEKHKKFAEQT 2314
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 2091 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 2150
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 2151 LKAKVEEARRLRERAEQ 2167
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1981 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 2038
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 2039 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 2098
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 2099 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 2158
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2159 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2218
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2219 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2273
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1969 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2028
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2029 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2079
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2080 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2134
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2135 LRQKQAADAEMEKHKKFAEQT 2155
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1932 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 1991
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 1992 LKAKVEEARRLRERAEQ 2008
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1822 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1879
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1880 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1939
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1940 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 1999
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2000 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2059
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2060 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2114
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 15/201 (7%)
Query: 147 QKLLVTEEEANRLAEELVAEEERMKQKAEK-KRLKKKRQKERKRQERLEQYCGEPKASTT 205
QK L EEEA R + + E ER+K K E+ +RL+++ ++E RQ +L Q + +
Sbjct: 1977 QKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAE 2036
Query: 206 SDGDESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLALRKVGDWPLSARREKGLNQEPQGR 265
+Q +E+ LD A R E+ Q
Sbjct: 2037 EKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAA---------EEAEEARVQAE 2087
Query: 266 GLALQKMGQEEESPPREERPQQSPKVQASPGLLAAALQQSQELAKLGTSFAQNGFYHEAV 325
A Q Q EE+ ++ ++ + +A A L++ E A+ +A
Sbjct: 2088 REAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAE-----QEAARRAQAEQAA 2142
Query: 326 VLFTQALKLNPQDHRLFGNRS 346
+ QA + H+ F ++
Sbjct: 2143 LRQKQAADAEMEKHKKFAEQT 2163
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 128 SASATFPSVSDSLLQVAMPQKLLVTEEEANRLAEE-----LVAEEERMKQKA----EKKR 178
+A T S + L+ A ++L EE R AEE L AEEE +Q+ E +R
Sbjct: 1940 NAEDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVER 1999
Query: 179 LKKKRQKERKRQERLEQ 195
LK K ++ R+ +ER EQ
Sbjct: 2000 LKAKVEEARRLRERAEQ 2016
Score = 29.6 bits (65), Expect = 7.0
Identities = 65/298 (21%), Positives = 109/298 (36%), Gaps = 46/298 (15%)
Query: 155 EANRLAEELVAEEERMKQKAEKKRLKKKRQKERKRQERLEQYCGEPKAS---------TT 205
EA RL E AE +++AE +RL++ + E ++ RLE+ + KA
Sbjct: 1830 EATRLKTE--AEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 1887
Query: 206 SDGD-ESPPSSPGNPVQGQCGEEEDSLDLSSTFVSLA--------------------LRK 244
SD + E + ++ + EE+ L L ++F A LR
Sbjct: 1888 SDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAEDTLRS 1947
Query: 245 VGDWPLSARREKGLNQEPQGR----------GLALQKMGQEEESPPREERPQQSPKVQAS 294
L A R++ L E + R LA ++ + EE + KV+ +
Sbjct: 1948 KEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEA 2007
Query: 295 PGLLAAALQQSQELAKLGTSFAQNGFY-HEAVVLFTQALKLNPQDHRLFGNRSFCHERLG 353
L A Q+S +L AQ E F K L +S + G
Sbjct: 2008 RRLRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRG 2067
Query: 354 QPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLRGGSQPDAARE 411
+ A A+ A R R + + + +R +++A +E + +Q AA E
Sbjct: 2068 EAEAARRAAEEAEEARVQAEREAAQSRRQVEEAERLKQSA---EEQAQARAQAQAAAE 2122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,995,847
Number of Sequences: 37866
Number of extensions: 1342817
Number of successful extensions: 13355
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 484
Number of HSP's that attempted gapping in prelim test: 8903
Number of HSP's gapped (non-prelim): 3278
length of query: 519
length of database: 18,247,518
effective HSP length: 107
effective length of query: 412
effective length of database: 14,195,856
effective search space: 5848692672
effective search space used: 5848692672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.