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Search of human proteins with 238814387
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|238814387 zinc finger, MYND domain containing 11 isoform b
[Homo sapiens]
(567 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|238814387 zinc finger, MYND domain containing 11 isoform b [H... 1175 0.0
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 1159 0.0
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 1159 0.0
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 182 7e-46
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 182 7e-46
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 182 9e-46
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 53 7e-07
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 53 7e-07
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 53 7e-07
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 52 1e-06
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 51 2e-06
gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... 49 9e-06
gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... 49 9e-06
gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo ... 49 9e-06
gi|21071070 transmembrane channel-like 1 [Homo sapiens] 49 2e-05
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 49 2e-05
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 48 3e-05
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 47 5e-05
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 47 5e-05
gi|148746195 trichohyalin [Homo sapiens] 46 8e-05
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 45 1e-04
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 45 2e-04
gi|38327039 heat shock 70kDa protein 4 [Homo sapiens] 44 4e-04
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 44 4e-04
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 44 5e-04
gi|92859701 myosin VI [Homo sapiens] 43 7e-04
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 43 7e-04
gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... 42 0.001
gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 42 0.002
gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo sap... 42 0.002
>gi|238814387 zinc finger, MYND domain containing 11 isoform b [Homo
sapiens]
Length = 567
Score = 1175 bits (3039), Expect = 0.0
Identities = 567/567 (100%), Positives = 567/567 (100%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQADIA 240
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQADIA
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQADIA 240
Query: 241 RMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQK 300
RMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQK
Sbjct: 241 RMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQK 300
Query: 301 EDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREGR 360
EDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREGR
Sbjct: 301 EDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREGR 360
Query: 361 FWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSS 420
FWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSS
Sbjct: 361 FWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSS 420
Query: 421 QEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDR 480
QEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDR
Sbjct: 421 QEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDR 480
Query: 481 MKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVE 540
MKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVE
Sbjct: 481 MKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVE 540
Query: 541 EIKKLATQHKQLISQTKKKQWVNTSLF 567
EIKKLATQHKQLISQTKKKQWVNTSLF
Sbjct: 541 EIKKLATQHKQLISQTKKKQWVNTSLF 567
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 1159 bits (2998), Expect = 0.0
Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 1/562 (0%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG-DSEQADI 239
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG DSEQADI
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
Query: 240 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 299
ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ
Sbjct: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
Query: 300 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 359
KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG
Sbjct: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
Query: 360 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 419
RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS
Sbjct: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
Query: 420 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 479
SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD
Sbjct: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
Query: 480 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 539
RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV
Sbjct: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
Query: 540 EEIKKLATQHKQLISQTKKKQW 561
EEIKKLATQHKQLISQTKKKQW
Sbjct: 541 EEIKKLATQHKQLISQTKKKQW 562
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 1159 bits (2998), Expect = 0.0
Identities = 561/562 (99%), Positives = 561/562 (99%), Gaps = 1/562 (0%)
Query: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV
Sbjct: 1 MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAV 60
Query: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR
Sbjct: 61 KDGLIVETLTVGCKGSKAGIEQEGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFR 120
Query: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG
Sbjct: 121 VYHSKCLSDEFRLRDSSSPWQCPVCRSIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKG 180
Query: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG-DSEQADI 239
KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYG DSEQADI
Sbjct: 181 KDNKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADI 240
Query: 240 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 299
ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ
Sbjct: 241 ARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQ 300
Query: 300 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 359
KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG
Sbjct: 301 KEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLREG 360
Query: 360 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 419
RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS
Sbjct: 361 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 420
Query: 420 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 479
SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD
Sbjct: 421 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 480
Query: 480 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 539
RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV
Sbjct: 481 RMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFV 540
Query: 540 EEIKKLATQHKQLISQTKKKQW 561
EEIKKLATQHKQLISQTKKKQW
Sbjct: 541 EEIKKLATQHKQLISQTKKKQW 562
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 182 bits (462), Expect = 7e-46
Identities = 100/286 (34%), Positives = 154/286 (53%), Gaps = 24/286 (8%)
Query: 88 PGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPV 144
P D + + N D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP
Sbjct: 97 PVDVVPQDGRN-DFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPE 149
Query: 145 CRSIKKKNTNK-----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLV 192
C I + +++ L+F + +MK+ D +K +HP Y +
Sbjct: 150 CEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYI 209
Query: 193 HSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQ-ADIARMLYKDTCHEL 251
+D+ T+++ + Y E F ADA+ +LHN +I+ G + + IA+++ K HE+
Sbjct: 210 FHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEM 269
Query: 252 DELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFG 311
+E+++C C+ + + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG
Sbjct: 270 NEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG 329
Query: 312 HHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 357
H RAW+P N ++ I K + A E+E++ +R
Sbjct: 330 -QHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 374
Score = 40.0 bits (92), Expect = 0.006
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 400 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 459
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 460 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 512
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 952
Query: 513 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQW 561
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQW
Sbjct: 953 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 1001
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 182 bits (462), Expect = 7e-46
Identities = 100/286 (34%), Positives = 154/286 (53%), Gaps = 24/286 (8%)
Query: 88 PGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPV 144
P D + + N D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP
Sbjct: 97 PVDVVPQDGRN-DFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPE 149
Query: 145 CRSIKKKNTNK-----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLV 192
C I + +++ L+F + +MK+ D +K +HP Y +
Sbjct: 150 CEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYI 209
Query: 193 HSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQ-ADIARMLYKDTCHEL 251
+D+ T+++ + Y E F ADA+ +LHN +I+ G + + IA+++ K HE+
Sbjct: 210 FHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEM 269
Query: 252 DELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFG 311
+E+++C C+ + + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG
Sbjct: 270 NEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG 329
Query: 312 HHHQRAWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 357
H RAW+P N ++ I K + A E+E++ +R
Sbjct: 330 -QHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 374
Score = 40.0 bits (92), Expect = 0.006
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 400 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 459
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 841 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 900
Query: 460 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 512
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 901 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 952
Query: 513 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQW 561
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQW
Sbjct: 953 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 1001
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 182 bits (461), Expect = 9e-46
Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 23/275 (8%)
Query: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSP---WQCPVCRSIKKKNTNK 155
+D+YC+ CH G+VL C+LC RVYH+KCL R +S P W CP C I +
Sbjct: 82 NDFYCWVCHREGQVLCCELCPRVYHAKCL------RLTSEPEGDWFCPECEKITVAECIE 135
Query: 156 -----------QEMGTYLRFIVSRMKERAIDLNKKGKD-NKHPMYRRLVHSAVDVPTIQE 203
+++ L+F + +MK+ D +K +HP Y + +D+ T+++
Sbjct: 136 TQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEK 195
Query: 204 KVNEGKYRSYEEFKADAQLLLHNTVIFYGDSEQ-ADIARMLYKDTCHELDELQLCKNCFY 262
+ Y E F ADA+ +LHN +I+ G + + IA+++ K HE++E+++C C+
Sbjct: 196 NAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYL 255
Query: 263 LSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSE 322
+ + DNWFC PC H LVWAK+KGF FWPAK ++ +D QVD RFFG H RAW+P
Sbjct: 256 AACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFG-QHDRAWVPIN 314
Query: 323 NIQDITVNIHRLHVKRSMGWKKACDELELHQRFLR 357
N ++ I K + A E+E++ +R
Sbjct: 315 NCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIR 349
Score = 40.0 bits (92), Expect = 0.006
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 400 NQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTND 459
+ +V+ K+ P T ++ + P S+ST ++A P + +
Sbjct: 816 SSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADI 875
Query: 460 GVCQSMCHDKY----TKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEK---RQAV 512
S D T+I+ND K T + E + +LR E+E+ + +Q +
Sbjct: 876 AKYTSKMMDAIKGTMTEIYNDLS-------KNTTGSTIAE-IRRLRIEIEKLQWLHQQEL 927
Query: 513 NKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKKQW 561
++ N++ M + +Q E+ ++ + E+KK L + +Q + +TKKKQW
Sbjct: 928 SEMKHNLELTM-AEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQW 976
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 427
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 428 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 461
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 435 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 492
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 493 GEWLCPRC 500
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 369 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 427
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 428 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 461
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 435 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 492
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 493 GEWLCPRC 500
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 53.1 bits (126), Expect = 7e-07
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 90 DEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIK 149
+E+D +H YC C GE+++CD C R YH CL E R W CP C
Sbjct: 428 EEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELD-RAPEGKWSCPHCEKEG 486
Query: 150 KKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRL 191
+ K+E Y +E + +K +++ H Y R+
Sbjct: 487 VQWEAKEEEEEY--------EEEGEEEGEKEEEDDHMEYCRV 520
Score = 42.0 bits (97), Expect = 0.002
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 81 EQEGYWLPGDEIDW--ETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRD-SS 137
E+E Y G+E E ++H YC C GE+L CD C YH CL+ L D +
Sbjct: 494 EEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPP--LPDIPN 551
Query: 138 SPWQCPVC 145
W CP C
Sbjct: 552 GEWLCPRC 559
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 52.0 bits (123), Expect = 1e-06
Identities = 58/301 (19%), Positives = 124/301 (41%), Gaps = 46/301 (15%)
Query: 281 ELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHRLHVKRSM 340
E++W K + + +KE+ + + W E I+++ +H R
Sbjct: 342 EMMWEKEEKMRRQEEMMWEKEEKMRRLE------EMMWEKEEKIRELEEKMHEQEKIREQ 395
Query: 341 GWKKACDEL--ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGR 398
K+ +E E +R +E + W+ + + R +EE I + + ++ ++
Sbjct: 396 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEE---KIREQEKKMWRQEEKIHEQEKI 452
Query: 399 RNQSVEPKKEEPEPETEAVSSSQEIPTMPQPI-EKVSVSTQTKKLSASSPRMLHRSTQTT 457
R + ++EE + E + +EI + + E+ + Q +K+ +M
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKM-------- 504
Query: 458 NDGVCQSMCHDKYTKIFNDFKDRMKSDHK-RETERVVREALEKLRS--EMEEEKRQAVNK 514
HD+ KI + + + K RE E +RE EK+R EM +E+ + + +
Sbjct: 505 ---------HDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGE 555
Query: 515 AVANMQG------------EMDRKCKQVKEKCK--EEFVEEIKKLATQHKQLISQTKKKQ 560
MQ E + K ++ KEK + EE + E ++ + ++++ + ++K
Sbjct: 556 QEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKM 615
Query: 561 W 561
W
Sbjct: 616 W 616
Score = 38.5 bits (88), Expect = 0.017
Identities = 43/214 (20%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 360 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 419
R+ + ++R E ++ ++E+LK E AK + Q VE +K E + + +
Sbjct: 193 RYIEELTKERDALSLELYRNTITDEELK---EKNAKLQEKLQLVESEKSEIQLNVKELKR 249
Query: 420 SQEIPTMPQPIEKVSVSTQT--KKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDF 477
E + P +++ K+L + S ++ Q + + + + K++
Sbjct: 250 KLERAKLLLPQQQLQAEADHLGKELQSVSAKL---QAQVEENELWNRLNQQQEEKMWRQE 306
Query: 478 KDRMKSDHK-RETERVVREALEKLRSEMEEEKRQ--------AVNKAVANMQGEMDRKCK 528
+ + + K +E E +RE EK+R + E+ +RQ + M E + K +
Sbjct: 307 EKIQEWEEKIQEQEEKIREQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMR 366
Query: 529 QVKEKC--KEEFVEEIKKLATQHKQLISQTKKKQ 560
+++E KEE + E+++ + +++ Q +K+Q
Sbjct: 367 RLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQ 400
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 51.2 bits (121), Expect = 2e-06
Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 22/247 (8%)
Query: 318 WIPSENIQDITVNIHRLHVKRSMGWKKACDEL--ELHQRFLREGRFWKSKNEDRGEEEAE 375
W E I+++ +H R K+ +E E +R +E + W+ + + R +EE
Sbjct: 340 WEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK- 398
Query: 376 SSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSV 435
EQ ++ QE K G + + + ++EE + + E + +E ++ +
Sbjct: 399 ------IREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIRE----QEKKI 448
Query: 436 STQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVRE 495
Q +K+ M + + MC + + K R + + RE E+ +RE
Sbjct: 449 REQEEKIREQEEMMQEQEEKMGEQE--GKMCEQEAKMQEQEEKMRRQEEKIREQEKKIRE 506
Query: 496 ALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVK--EKCKEEFVEEIKKLATQHKQLI 553
EK+R E EE ++ K M + ++ C+Q + ++ +E+ + +K+ Q +L
Sbjct: 507 QEEKIR-EQEEMMQEQEEK----MWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLR 561
Query: 554 SQTKKKQ 560
Q +K Q
Sbjct: 562 QQEEKMQ 568
Score = 35.0 bits (79), Expect = 0.18
Identities = 31/175 (17%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 387 KVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASS 446
++ Q+ K R+ + ++ ++E+ + + E + +E K+
Sbjct: 281 RLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEE------------------KMRRQE 322
Query: 447 PRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEE 506
M + + + M +K KI + +++M K + R+ EK+R E+
Sbjct: 323 EMMWEKEEKMRRQ---EEMMWEKEEKI-RELEEKMHEQEKIREQEEKRQEEEKIR---EQ 375
Query: 507 EKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQW 561
EKRQ + +M R+ ++++E+ EE + E +++ + ++ + + ++K W
Sbjct: 376 EKRQ-------EQEAKMWRQEEKIREQ--EEKIREQEEMMQEQEEKMGEQEEKMW 421
>gi|190014588 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 49.3 bits (116), Expect = 9e-06
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 281 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 333
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 334 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 380
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 381 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 436
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 437 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 494
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 495 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 548
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 549 HKQLISQTKKKQ 560
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|190014586 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo
sapiens]
Length = 333
Score = 49.3 bits (116), Expect = 9e-06
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 281 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 333
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 334 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 380
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 381 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 436
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 437 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 494
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 495 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 548
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 549 HKQLISQTKKKQ 560
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|19923653 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo
sapiens]
Length = 530
Score = 49.3 bits (116), Expect = 9e-06
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 281 ELVWAKMKGFGFWPAKVMQKED-------NQVDVRFFGHHHQRAWIPSENIQDITVNIHR 333
+L++AKMKG+ WPA+V + D N++ + FFG H+ A++ ++I + N +
Sbjct: 9 DLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFG-THETAFLGPKDIFPYSENKEK 67
Query: 334 L-HVKRSMGWKKACDELELHQ--RFLREGRFWKSKN--EDRGEEEAESSIS--------S 380
+ G+ + E++ + +F + K N D EE E+S+S
Sbjct: 68 YGKPNKRKGFNEGLWEIDNNPKVKFSSQQAATKQSNASSDVEVEEKETSVSKEDTDHEEK 127
Query: 381 TSNEQ----LKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVS 436
SNE + +T A++GR+ ++ + + E ++S + P+ +
Sbjct: 128 ASNEDVTKAVDITTPKAARRGRKRKAEKQVETEEAGVVTTATASVNLKVSPKRGRPAATE 187
Query: 437 TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH--KRETERVVR 494
+ K P+M+ + + +D + + K + K + K D ++E ++ +
Sbjct: 188 VKIPK-PRGRPKMVKQPCPSESDIITEEDKSKKKGQEEKQPKKQPKKDEEGQKEEDKPRK 246
Query: 495 EALEKLRSEMEEEKRQAVNK----AVANMQGEMDRKCKQVKEKCKEEFVEEIKK--LATQ 548
E +K + E KR+ + K + ++ + E D + + K K F ++ L Q
Sbjct: 247 EPDKKEGKKEVESKRKNLAKTGVTSTSDSEEEGDDQEGEKKRKGGRNFQTAHRRNMLKGQ 306
Query: 549 HKQLISQTKKKQ 560
H++ + K+KQ
Sbjct: 307 HEKEAADRKRKQ 318
>gi|21071070 transmembrane channel-like 1 [Homo sapiens]
Length = 760
Score = 48.5 bits (114), Expect = 2e-05
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 401 QSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDG 460
+ V+ K EE E ETE SS +E + + S+ + K R+ N+
Sbjct: 4 KKVQIKVEEKEDETEESSSEEEEEVEDKLPRRESLRPKRK-----------RTRDVINED 52
Query: 461 VCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQ 520
+ D+ T+ + + R + E E + E LE+L++E++E KRQ +
Sbjct: 53 DPEPEPEDEETRKAREKERRRRLKRGAEEEEIDEEELERLKAELDE-KRQIIATV----- 106
Query: 521 GEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQW 561
KCK K + K E ++E KK ++++ + + K K+W
Sbjct: 107 -----KCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKRW 142
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 48.5 bits (114), Expect = 2e-05
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 94 WETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
+ET++ D YC C GE+++CD C R YH CL E + W CP C
Sbjct: 338 YETDHQD-YCEVCQQGGEIILCDTCPRAYHLVCLDPELE-KAPEGKWSCPHC 387
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 81 EQEGY-WLPGDEIDWETE--------NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEF 131
E+EG W P D+ D E E +H +C C GE+L CD C YH CL+
Sbjct: 388 EKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPL 447
Query: 132 RLRDSSSPWQCPVC 145
+ W CP C
Sbjct: 448 P-EIPNGEWLCPRC 460
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 47.8 bits (112), Expect = 3e-05
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 94 WETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
+ET++ D YC C GE+++CD C R YH CL + + W CP C
Sbjct: 365 YETDHQD-YCEVCQQGGEIILCDTCPRAYHMVCLDPDME-KAPEGKWSCPHC 414
Score = 40.8 bits (94), Expect = 0.003
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 89 GDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVC 145
G +++ E ++H +C C GE+L CD C YH CL+ + W CP C
Sbjct: 438 GGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLP-EIPNGEWLCPRC 493
>gi|74027251 tripartite motif-containing 33 protein isoform beta [Homo
sapiens]
Length = 1110
Score = 47.0 bits (110), Expect = 5e-05
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 98 NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKK------- 150
N DW C C G++L C+ C +V+H C L S W C CR I K
Sbjct: 886 NEDW-CAVCQNGGDLLCCEKCPKVFHLTCHVPTL-LSFPSGDWICTFCRDIGKPEVEYDC 943
Query: 151 ---KNTNKQEMGTYLRFIVSRMKERAI------DLNKKGKD---NKHPMYRRLVHSAVDV 198
+++ K + L + R ER + +L+ + ++ P Y +++ +D+
Sbjct: 944 DNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDL 1003
Query: 199 PTIQEKVNEGKYRSY---EEFKADAQLLLHNTVIF-YGDSEQADIAR 241
T+++K+ + + Y ++F AD +L+ N F DSE A +
Sbjct: 1004 STVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEADSEVAQAGK 1050
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 47.0 bits (110), Expect = 5e-05
Identities = 55/283 (19%), Positives = 121/283 (42%), Gaps = 28/283 (9%)
Query: 298 MQKEDNQVDVRFFGHHHQR-AWIPSENIQDITVNIHRLHVKRSMGWKKACDELELHQRFL 356
+QK + + R QR +W+ ++ + ++ ++ +K +ELE Q+
Sbjct: 651 LQKAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAE 710
Query: 357 REGRFWKS-------KNEDRGEEEAESSISSTSNEQLKVTQEPRAK-KGRRNQSVEPKKE 408
R K+ K E E++E + + + E K Q+ R + +G R ++V ++
Sbjct: 711 RASLEQKNRQMLEQLKEEIEASEKSEQAALNAAKE--KALQQLREQLEGERKEAVATLEK 768
Query: 409 EPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPR---MLHRSTQTTNDGVCQSM 465
E E E + SS E + VS+ KK+ + + L + V Q
Sbjct: 769 EHSAELERLCSSLEAK------HREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKS 822
Query: 466 CH-----DKYTKIFNDFKDRMKSDHKRETERVVRE---ALEKLRSEMEEEKRQAVNKAVA 517
H + + + + + ++ +H+R +++ E + K R + E E+R+ + +
Sbjct: 823 YHVAGYEHELSSLLREKRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLG 882
Query: 518 NMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
++ GE++R + + + + E+ K+L ++ Q +K Q
Sbjct: 883 HLTGELERLQRAHERELETVRQEQHKRLEDLRRRHREQERKLQ 925
Score = 38.1 bits (87), Expect = 0.022
Identities = 44/217 (20%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 349 LELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKE 408
LE QR L E + +++ ++ E E L++ Q+ K + S+ + +
Sbjct: 603 LEQDQRHLLESK------QEKMQQLREKLCQEEEEEILRLHQQ----KEQSLSSLRERLQ 652
Query: 409 EPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKK--LSASSPRMLH--RSTQTTNDGVCQS 464
+ E EA +E + +V STQ + + A L R + ++
Sbjct: 653 KAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERA 712
Query: 465 MCHDKYTKIFNDFKDRMKSDHKRETERV---VREALEKLRSEMEEEKRQAVNKAVANMQG 521
K ++ K+ +++ K E + +AL++LR ++E E+++AV
Sbjct: 713 SLEQKNRQMLEQLKEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHSA 772
Query: 522 EMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKK 558
E++R C ++ K +E KK+ ++ +Q +K
Sbjct: 773 ELERLCSSLEAKHREVVSSLQKKIQEAQQKEEAQLQK 809
Score = 35.4 bits (80), Expect = 0.14
Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 8/196 (4%)
Query: 371 EEEAESSISSTSNEQLK--VTQEPRAKKGRRNQSVE---PKKEEPEPETEAVSSSQEIPT 425
++E +S S E+L + E RA+ R+ + E P+ E +PE + E
Sbjct: 456 QDELQSKQSKGLEERLSPPLPHEERAQSPPRSLATEEEPPQGPEGQPEWKEAEELGEDSA 515
Query: 426 MPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDH 485
++ Q A+ + + +Q G Q D K+ + S
Sbjct: 516 ASLSLQLSLQREQAPSPPAACEKGKEQHSQAEELGPGQEEAEDPEEKVAVSPTPPV-SPE 574
Query: 486 KRETERVV--REALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIK 543
R TE V + E MEE Q + + ++ K +Q++EK +E EEI
Sbjct: 575 VRSTEPVAPPEQLSEAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEEEEIL 634
Query: 544 KLATQHKQLISQTKKK 559
+L Q +Q +S +++
Sbjct: 635 RLHQQKEQSLSSLRER 650
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 46.2 bits (108), Expect = 8e-05
Identities = 44/225 (19%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 342 WKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQ 401
W K +E E H++ R+ + + + E+R E + +Q + Q+ R ++ R +
Sbjct: 457 WLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERRE 516
Query: 402 SVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPR--MLHRSTQTTND 459
++EE E + + S Q++ + + + + +K R L R + D
Sbjct: 517 QRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRD 576
Query: 460 GVCQSMCHDKYTKIFNDFKDRMKSDHKR-ETERVVREALEK---LRSEMEEEKRQAVNKA 515
+ + + ++ + ++R++ KR E ER+ +E + R E EEE+RQ + K+
Sbjct: 577 QLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKS 636
Query: 516 VANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
+ + +R+ +Q++ + +E + +K+ + ++ + Q K++
Sbjct: 637 ----EEQEERRQQQLRREQQERREQRLKR--EEEEERLEQRLKRE 675
Score = 43.9 bits (102), Expect = 4e-04
Identities = 44/221 (19%), Positives = 98/221 (44%), Gaps = 13/221 (5%)
Query: 347 DELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEP---RAKKGRRNQSV 403
+E + QR RE + + + E+R E++ E EQ + +E R ++ RR Q +
Sbjct: 292 EEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQL 351
Query: 404 EPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSP----RMLHRSTQTTND 459
++EE E + + QE Q + + + ++L + L R Q +
Sbjct: 352 RREQEEERREQQ-LRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRRE 410
Query: 460 GVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANM 519
Q + ++ + + + R + + +R ++ +E E+ +EE+R + +
Sbjct: 411 ---QQLRREQQLR--REQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETE 465
Query: 520 QGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
+ E +R+ +Q+K +EE E KL + ++ + +++Q
Sbjct: 466 RHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQ 506
Score = 37.7 bits (86), Expect = 0.028
Identities = 38/219 (17%), Positives = 90/219 (41%), Gaps = 7/219 (3%)
Query: 347 DELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKK--GRRNQSVE 404
D + R+ + W+ + E R EEE S E+ ++ R ++ R + E
Sbjct: 165 DRQRRDEELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRRRELLELRRKGRE 224
Query: 405 PKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSP---RMLHRSTQTTNDGV 461
K+++ + V +E + + + + +KL P R L +
Sbjct: 225 EKQQQRRERQDRVFQEEEEKEWRK--RETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLE 282
Query: 462 CQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQG 521
Q + ++ + + R + +R+ E RE E+ R + E ++Q + +
Sbjct: 283 RQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRRE 342
Query: 522 EMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
+ +R+ +Q++ + +EE E+ + + ++ Q +++Q
Sbjct: 343 QEERREQQLRREQEEERREQQLRREQEEERREQQLRREQ 381
Score = 33.9 bits (76), Expect = 0.41
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 18/208 (8%)
Query: 350 ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEE 409
E ++FL+E + + + +R E E T EQL+ ++ R +K + + P++EE
Sbjct: 1704 ERERKFLQEEQQLRRQELERKFREEEQLRQETEQEQLR--RQERYRKILEEEQLRPEREE 1761
Query: 410 PE-PETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHD 468
+ E +E + Q E+ + +Q S R Q + Q +
Sbjct: 1762 QQLRRQERDRKFREEEQLRQEREEQQLRSQ------ESDRKFREEEQLRQEREEQQLRPQ 1815
Query: 469 KYTKIFNDFKDRMKSDH---KRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDR 525
+ D K R + + + + +R+ +E + R+E + ++ + + E ++
Sbjct: 1816 Q-----RDGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQ 1870
Query: 526 KCKQVKE-KCKEEFVEEIKKLATQHKQL 552
K +Q +E K +EE + +K +H+Q+
Sbjct: 1871 KRRQERERKLREEHIRRQQKEEQRHRQV 1898
Score = 32.7 bits (73), Expect = 0.91
Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 21/213 (9%)
Query: 350 ELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEE 409
E + RE R + + E + E + + L+ +E R ++ R Q + KK +
Sbjct: 908 EEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQ 967
Query: 410 PEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDK 469
+ E E P + E+ + ++L ++L + + +
Sbjct: 968 QKEE----QLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRR----RQEWERQ 1019
Query: 470 YTKIFNDFKDRMKSDHKR--ETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKC 527
Y K KD ++ + ++ ER R E+ R EEE+ Q + + + E R+
Sbjct: 1020 YRK-----KDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQ 1074
Query: 528 KQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
+ ++ KEE +L + +QL+ + +K+
Sbjct: 1075 ELERQYRKEE------ELQQEEEQLLREEPEKR 1101
Score = 32.7 bits (73), Expect = 0.91
Identities = 36/213 (16%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 356 LREGRFWKSKNEDRG-EEEAESSISSTSNEQLKVTQEPRAKKGRRNQSV-EPKKEEPEPE 413
LR+ R K + E++ +E E + ++ + +E + ++ R++ E + EPE
Sbjct: 1455 LRQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPE 1514
Query: 414 TEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKI 473
+ + Q++ + + + Q ++ R R + + + ++
Sbjct: 1515 RKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLS- 1573
Query: 474 FNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEK 533
R + D K E E+ R ME+E++ + ++ E DRK ++ ++
Sbjct: 1574 ------RQERDRKFRLEEQKVRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQL 1627
Query: 534 CKEEFVEEI------KKLATQHKQLISQTKKKQ 560
+E +++ +K + QL Q +++Q
Sbjct: 1628 LQEREEQQLHRQERDRKFLEEEPQLRRQEREQQ 1660
Score = 32.3 bits (72), Expect = 1.2
Identities = 48/241 (19%), Positives = 94/241 (39%), Gaps = 19/241 (7%)
Query: 337 KRSMGWKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKK 396
+R K+ E E Q+ L+ + + + E+ E E+ + E R K+
Sbjct: 615 RREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKR 674
Query: 397 GRRNQSVEPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQT 456
+ E + E E E IP +E + + Q+K S + R Q
Sbjct: 675 EHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQE 734
Query: 457 TND----------GVCQSMCH--DKYTKIFNDFKDRMKSDHKRETERVVREALEKLRSEM 504
+ + H + + DF + +++ K E R A LR +
Sbjct: 735 QEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQR 794
Query: 505 EE----EKRQAVNKAVANMQGEMDRKCKQVKEKCKE-EFVEEIKKLATQHKQLISQTKKK 559
E E+RQ + + E +++ +Q +E+ KE +F+EE ++L Q ++ Q +++
Sbjct: 795 ERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQL--QRRERAQQLQEE 852
Query: 560 Q 560
+
Sbjct: 853 E 853
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 24/151 (15%)
Query: 98 NHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCRSIKK------- 150
N DW C C G++L C+ C +V+H C L S W C CR I K
Sbjct: 886 NEDW-CAVCQNGGDLLCCEKCPKVFHLTCHVPTL-LSFPSGDWICTFCRDIGKPEVEYDC 943
Query: 151 ---KNTNKQEMGTYLRFIVSRMKERAI------DLNKKGKD---NKHPMYRRLVHSAVDV 198
+++ K + L + R ER + +L+ + ++ P Y +++ +D+
Sbjct: 944 DNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDL 1003
Query: 199 PTIQEKVNEGKYRSY---EEFKADAQLLLHN 226
T+++K+ + + Y ++F AD +L+ N
Sbjct: 1004 STVKKKLQKKHSQHYQIPDDFVADVRLIFKN 1034
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 45.1 bits (105), Expect = 2e-04
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 83 EGYWLPGDEIDWETENHDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQC 142
E +W GD H+ +C C G++L+CD C RVYH CL + W C
Sbjct: 432 EEHWPKGDI-------HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM-WIC 483
Query: 143 PVCR 146
P C+
Sbjct: 484 PRCQ 487
>gi|38327039 heat shock 70kDa protein 4 [Homo sapiens]
Length = 840
Score = 43.9 bits (102), Expect = 4e-04
Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 24/217 (11%)
Query: 368 DRGEEEAESSISSTSNEQLKVTQE-PRAKKGRRNQSVEPKKEEPEPETEAVSSSQEIPTM 426
+ EE E+ ++ E+++V QE P ++ ++ E K E E ET S +
Sbjct: 504 EENEEPMETDQNAKEEEKMQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQ 563
Query: 427 PQPIEKVSVSTQTKKLSASSPRMLHRSTQTTN---DGVCQSMCHDKYTKIFNDFKD---- 479
P +K V T T L + + + N + + + DK K ND K+
Sbjct: 564 PPQAKKAKVKTSTVDLPIENQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEE 623
Query: 480 ---RMKSDHKRETERVVRE--------ALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCK 528
M+ E E+ V E LE + + E+ + + E+ +
Sbjct: 624 YVYEMRDKLSGEYEKFVSEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLGQ 683
Query: 529 QVKEKCKE-----EFVEEIKKLATQHKQLISQTKKKQ 560
+K + +E + EE+ K Q+ ++IS K K+
Sbjct: 684 PIKIRFQESEERPKLFEELGKQIQQYMKIISSFKNKE 720
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 99 HDWYCFECHLPGEVLICDLCFRVYHSKCLSDEFRLRDSSSPWQCPVCR 146
H+ +C C G++L+CD C RVYH CL + W CP C+
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGM-WICPRCQ 533
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 43.5 bits (101), Expect = 5e-04
Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 49/230 (21%)
Query: 361 FWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSSS 420
+W+ K E E+ S T + + +T EP A+ G + + E P PET+ S
Sbjct: 334 YWEKKQE-------EARKSPTPSAPVPLT-EPAAQPGEGHAAPTNVVENPLPETD----S 381
Query: 421 QEIPTMPQPIEKV--------------------SVSTQTKKLSASSPRMLHRSTQTTNDG 460
Q IP P + +V+T ++ ++ R TND
Sbjct: 382 QPIPPSGGPFSEPQFHNGESEESHEQFLKALQNAVTTFVNRMKSNH----MRGRSITNDS 437
Query: 461 VCQSM------CHDKYTKIFNDFKDRM----KSDHKRETERVVREALEKLRSEMEEEKRQ 510
S+ H + ++ N +R K R R AL LR E E+ R+
Sbjct: 438 AVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALREEHREKLRR 497
Query: 511 AVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKKQ 560
A +A Q ++ +K + +++K K+E++E ++LA Q Q Q K++Q
Sbjct: 498 AAEEAERQRQIQLAQKLEIMRQK-KQEYLEVQRQLAIQRLQ--EQEKERQ 544
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 43.1 bits (100), Expect = 7e-04
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Query: 424 PTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKS 483
P M + I+ + +S T S M Q D + +S ++ + + + +
Sbjct: 865 PEMNKQIKNLEISIDTLMAKIKSTMMTQEQIQKEYDALVKSS-----EELLSALQKKKQQ 919
Query: 484 DHKRETERVVREALEKLRSEMEE-EKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEI 542
+ + E R ++E +EK R EE EKR+ + M+ EM+ K KQ +E+ K+ +E
Sbjct: 920 EEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRKQEEEERKKREDDEK 979
Query: 543 KKLATQHKQLISQTKKK 559
+ A QL Q +++
Sbjct: 980 RIQAEVEAQLARQKEEE 996
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 43.1 bits (100), Expect = 7e-04
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 23/185 (12%)
Query: 382 SNEQLKVTQEPRAKKGRRNQSVE---PKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQ 438
S E++ V ++ K + E P KEEP P V+ Q P+ ++ +V +
Sbjct: 582 SKEKVMVKKDKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKE 641
Query: 439 TKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALE 498
TK P + V + + K +K + K + E V +E +
Sbjct: 642 TK----VKPEDKKEEKEKPKKEVAK-----------KEDKTPIKKEEKPKKEEVKKEVKK 686
Query: 499 KLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEF--VEEIKKLATQHKQL---I 553
+++ E ++E ++ V K + + + K ++ KE KEE +EIKKL K+ +
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPL 746
Query: 554 SQTKK 558
S+ KK
Sbjct: 747 SEAKK 751
Score = 35.4 bits (80), Expect = 0.14
Identities = 38/178 (21%), Positives = 76/178 (42%), Gaps = 19/178 (10%)
Query: 384 EQLKVTQEPRAKKGRRNQSVEPKKEEP-EPETEAVSSSQEIPTMPQPIEKVSVSTQTKKL 442
E KV + K + V KK++P + ET+ + +E+P+ +P V K+
Sbjct: 567 EVTKVNHVEKPPKVESKEKVMVKKDKPIKTETKPSVTEKEVPSKEEP-SPVKAEVAEKQA 625
Query: 443 SASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERVVREALEKLRS 502
+ P+ T K TK+ K K + K + ++ V + +K
Sbjct: 626 TDVKPKAAKEKTVK------------KETKV----KPEDKKEEKEKPKKEVAKKEDKTPI 669
Query: 503 EMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKK-LATQHKQLISQTKKK 559
+ EE+ ++ K + + + K + KE KE +E+KK + + K+ + + +K+
Sbjct: 670 KKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKE 727
Score = 33.1 bits (74), Expect = 0.70
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 355 FLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAK-KGRRNQSVEPKKEEPEPE 413
++RE R + +DR EE+ + +I EQ + + K + R + EP+K E E
Sbjct: 985 YIREKRESVASGDDRAEEDMDEAIEKGEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDY 1044
Query: 414 TEA-VSSSQEIPTMPQPIEKVSVSTQTKKLSASSP 447
A V + E + + ++T TK+L A SP
Sbjct: 1045 VMAVVDKAAEAGGAEE--QYGFLTTPTKQLGAQSP 1077
Score = 31.2 bits (69), Expect = 2.7
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
Query: 365 KNEDRGEEEAESSISSTSNEQLKVTQEPRAKKG-RRNQSVEPKKEEPEPETEAVSSSQEI 423
K E + EE+ E E K T KK ++ + E KKEE EP+ +EI
Sbjct: 685 KKEIKKEEKKEPK-----KEVKKETPPKEVKKEVKKEEKKEVKKEEKEPK-------KEI 732
Query: 424 PTMPQPIEKVSVS-TQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDK 469
+P+ +K S ++ KK +A P++ + D V +K
Sbjct: 733 KKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEK 779
>gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
[Homo sapiens]
Length = 621
Score = 42.4 bits (98), Expect = 0.001
Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 41/200 (20%)
Query: 360 RFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSVEPKKEEPEPETEAVSS 419
R K K E++ ++EAE + + +E AK+ +R +E + E E E V
Sbjct: 279 RIKKFKEEEKAKKEAEKKAKAEAKR-----KEQEAKEKQRQAELEAARLAKEKEEEEVRQ 333
Query: 420 SQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKD 479
+ + I+K ++ + +KL S K +N F D
Sbjct: 334 QALLAKKEKDIQKKAIKKERQKLRNS-------------------------CKTWNHFSD 368
Query: 480 RMKSDHKRETERV-VREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEF 538
E ERV + E +EKL +E Q +N+ + + E+ K EK EE
Sbjct: 369 -------NEAERVKMMEEVEKLCDRLELASLQCLNETLTSCTKEVG---KAALEKQIEEI 418
Query: 539 VEEIKKLATQHKQLISQTKK 558
E+I+K + + + Q K
Sbjct: 419 NEQIRKEKEEAEARMRQASK 438
>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
Length = 552
Score = 42.0 bits (97), Expect = 0.002
Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 36/241 (14%)
Query: 350 ELHQRFLREGRFWKSKNEDRGEEEAESSISST----SNEQLKVTQEPRAKKGRRNQSVEP 405
E+H R + W + E++ E+ + Q+ +E K+G+R +++E
Sbjct: 81 EMHLRSQEVVKHWTNTYAGMKEQKLEAKKKRDEEIEAERQILDLEEEIYKQGKRKKAIEN 140
Query: 406 KKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLH-------------- 451
K+ +TE V + + + +++ + +K S +
Sbjct: 141 AKQYQFYQTERVKNFHSGLLLSRVMKERDAQIEFRKSKIKSDKKWEEQLKLNIEKAFKEE 200
Query: 452 --RSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKRETERV----------VREALEK 499
++ + + V + H K K + ++R K +++ E + +R+ LEK
Sbjct: 201 QEKAEKRHRERVALAKDHLKQIKEHEEEEERRKKYEEKDAEEIKRQNALYEIEMRKKLEK 260
Query: 500 LRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKLATQHKQLISQTKKK 559
R EM E +R+ + +MQ + K V+++ +EE E+++K K+LI K+K
Sbjct: 261 KREEMHESRRRFLE----HMQDK--HIIKAVEQQQQEEEDEKMRKFIKAKKRLIQMGKEK 314
Query: 560 Q 560
+
Sbjct: 315 E 315
>gi|169208122 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 479
Score = 41.6 bits (96), Expect = 0.002
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 376 SSISSTSNEQLKVTQEPRAKKGR-----RNQSVEPKKEEPEPETEAVSSSQ-EIPTMPQP 429
+S+ TS E+ K K GR +NQ+ EP EP V Q E + +
Sbjct: 113 NSLVRTSKEEKKHEIHLVQKLGRSLFKLKNQTAEPLAPEPPAGPSKVEQLQDETNHLRKE 172
Query: 430 IEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKIFNDFKDRMKSDHKR-- 487
+E V Q + + +L+R Q + H++ ++ ++ ++R+ +R
Sbjct: 173 LESVGRQLQAEVENNQMLSLLNRR-QEERLREQEERLHEQEERL-HEQEERLCEQEERLC 230
Query: 488 ETERVVREALEKLRSEMEE--EKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIKKL 545
E E +RE E+LR + E E+ + + + + + +R C+Q K +E +EE++KL
Sbjct: 231 EQEERLREQEERLREQEERLHEQEERLCEQEERLCEQEERLCEQEKLPGQERLLEEVEKL 290
Query: 546 ATQHKQLISQTK 557
Q ++ Q +
Sbjct: 291 LEQERRQEEQER 302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,659,401
Number of Sequences: 37866
Number of extensions: 1020166
Number of successful extensions: 8374
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 6655
Number of HSP's gapped (non-prelim): 1963
length of query: 567
length of database: 18,247,518
effective HSP length: 108
effective length of query: 459
effective length of database: 14,157,990
effective search space: 6498517410
effective search space used: 6498517410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.