Search of human proteins with 23821015

Search of human proteins with 23821015

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23821015 DnaJ (Hsp40) homolog, subfamily C, member 27 [Homo
sapiens]
         (273 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23821015 DnaJ (Hsp40) homolog, subfamily C, member 27 [Homo s...   556   e-159
gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]           114   1e-25
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           111   6e-25
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    109   3e-24
gi|19923483 GTPase Rab14 [Homo sapiens]                               108   5e-24
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          108   7e-24
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         107   1e-23
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   106   2e-23
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          106   2e-23
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           105   4e-23
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           104   7e-23
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          103   1e-22
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           103   2e-22
gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]           103   2e-22
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          103   2e-22
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          102   4e-22
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   102   5e-22
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            102   5e-22
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            102   5e-22
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      101   8e-22
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          100   1e-21
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           100   1e-21
gi|34485714 Ras-related protein Rab-23 [Homo sapiens]                  99   3e-21
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...    99   3e-21
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...    99   3e-21
gi|34485716 Ras-related protein Rab-23 [Homo sapiens]                  99   3e-21
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          98   7e-21
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]           98   9e-21
gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]           97   2e-20
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]           96   3e-20

>gi|23821015 DnaJ (Hsp40) homolog, subfamily C, member 27 [Homo
           sapiens]
          Length = 273

 Score =  556 bits (1432), Expect = e-159
 Identities = 273/273 (100%), Positives = 273/273 (100%)

Query: 1   MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV 60
           MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV
Sbjct: 1   MEANMPKRKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV 60

Query: 61  RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP 120
           RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP
Sbjct: 61  RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP 120

Query: 121 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI 180
           HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI
Sbjct: 121 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI 180

Query: 181 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL 240
           SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL
Sbjct: 181 SIVDLCENGGKRPTTNSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKL 240

Query: 241 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK 273
           AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK
Sbjct: 241 AVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK 273


>gi|7661922 RAB21, member RAS oncogene family [Homo sapiens]
          Length = 225

 Score =  114 bits (284), Expect = 1e-25
 Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%)

Query: 12  GRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFD 71
           GR+   KV+ +G   VGK+ ++ RYCE +F  K++ T+   +   K+++  + + + I+D
Sbjct: 15  GRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWD 74

Query: 72  MAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVV 131
            AG   F+ +   +Y+D+ G ILVYD+  +DSF  +  W+ E+++ LG       I   +
Sbjct: 75  TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLG-----NEICLCI 129

Query: 132 CANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCE 187
             NKID  K R V   E   +AES G  ++ TSA+  +GI E+F       +DLC+
Sbjct: 130 VGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF-------LDLCK 178


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  111 bits (278), Expect = 6e-25
 Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 5/158 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K I +G+  VGKSC++ ++ +KRF   +  TIG+++G   + +  ++IK+ I+D AG   
Sbjct: 8   KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G +LVYD+ ++D+F+ L  WL + +Q    H N  N++ ++  NK D
Sbjct: 68  FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ----HSN-SNMVIMLIGNKSD 122

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
               R V + EG  +A   G ++ ETSA+T   + E F
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  109 bits (272), Expect = 3e-24
 Identities = 51/158 (32%), Positives = 91/158 (57%), Gaps = 5/158 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K I +G+  VGKSC++ ++ +KRF   +  TIG+++G   V++  ++IK+ I+D AG   
Sbjct: 8   KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G +LVYD+ ++++F+ L +WL + +Q      +  N++ ++  NK D
Sbjct: 68  FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-----SSSNMVIMLIGNKSD 122

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
               R V   EG  +A   G ++ ETSA+T   + E F
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAF 160


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  108 bits (270), Expect = 5e-24
 Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 5/158 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K I +G+  VGKSC++ ++ EK+F++    TIG+++G   + V  ++IK+ I+D AG   
Sbjct: 13  KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  V   +Y+   G ++VYD+ ++ +++ L +WL + +    P     N + ++  NK D
Sbjct: 73  FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP-----NTVIILIGNKAD 127

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
               R V   E + +AE  G L+ E SA+TGE + + F
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAF 165


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  108 bits (269), Expect = 7e-24
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 5/176 (2%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K + +GNA  GKSC++ ++ EK+F      TIG+++G   ++V  + +K+ I+D AG   
Sbjct: 15  KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 74

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  V   +Y+   G +LVYD+  +++++AL  WL + +         +NI+ ++C NK D
Sbjct: 75  FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-----QNIVIILCGNKKD 129

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKRP 193
               R V   E   +A+    ++ ETSA TGE + E F      I++  E+G   P
Sbjct: 130 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDP 185


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  107 bits (266), Expect = 1e-23
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 5/176 (2%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K + +G+A  GKSC++ ++ E +F      TIG+++G   V+V  + +K+ I+D AG   
Sbjct: 10  KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  V   +Y+   G +LVYD+  ++++++L AWL + +    P     NI+ ++C NK D
Sbjct: 70  FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-----NIVVILCGNKKD 124

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKRP 193
               R V   E   +A+    ++ ETSA TGE + E F     +I++  ++G   P
Sbjct: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDP 180


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  106 bits (264), Expect = 2e-23
 Identities = 50/165 (30%), Positives = 94/165 (56%), Gaps = 5/165 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGKSC++ R+ +  +   Y++TIG+D+ +  + +  + IK+ I+D AG   
Sbjct: 13  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  + + +Y+   G+I+VYDV  ++SF+ +  WL E+ +        EN+  ++  NK D
Sbjct: 73  FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS-----ENVNKLLVGNKCD 127

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISI 182
            T  + VD +  + +A+S G  + ETSA+    + + F T    I
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  106 bits (264), Expect = 2e-23
 Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 9/180 (5%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGKSC++ R+ +  +   Y++TIG+D+ +  + +  + IK+ I+D AG   
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  + + +Y+   G+I+VYDV  ++S+  +  WL E+ +        EN+  ++  NK D
Sbjct: 70  FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS-----ENVNKLLVGNKSD 124

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDL----CENGGKRP 193
            T  + VD +  + +A+S G  + ETSA+    + + F T    I         +GG+RP
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 184


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  105 bits (262), Expect = 4e-23
 Identities = 54/175 (30%), Positives = 98/175 (56%), Gaps = 7/175 (4%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGK+C+I R+ E  F + Y++TIGID+ +  V +  ++IK+ ++D AG   
Sbjct: 10  KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G+ILVYD+  + SF+ +  W+  +K+       +E ++     NK D
Sbjct: 70  FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS--AGVERLLL---GNKCD 124

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKR 192
               R V + +    A   G  +FETSA++   ++E F +    I  L ++GG+R
Sbjct: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSGGRR 177


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  104 bits (260), Expect = 7e-23
 Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 13/199 (6%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGKS ++ R+ +  F   Y+ TIG+D+ +  V +   ++K+ I+D AG   
Sbjct: 10  KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  + + +Y+ T GVI+VYDV   +SF  +  WL E+ Q      N +++  ++  NK D
Sbjct: 70  FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ------NCDDVCRILVGNKND 123

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKRPTTNS 197
             + + V+  +   +A   G   FETSA+    + EMF      I +L     K    N 
Sbjct: 124 DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFN----CITELVLRAKK---DNL 176

Query: 198 SASFTKEQADAIRRIRNSK 216
           +    ++Q D ++  +NSK
Sbjct: 177 AKQQQQQQNDVVKLTKNSK 195


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  103 bits (258), Expect = 1e-22
 Identities = 50/167 (29%), Positives = 93/167 (55%), Gaps = 5/167 (2%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +GN+ VGK+  + RY +  F   +++T+GID+ V  V+  ++ +K+ I+D AG   
Sbjct: 24  KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 83

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           +  +   +Y+   G IL+YD+  ++SF+A+  W  ++K       + +N   ++  NK D
Sbjct: 84  YRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTY-----SWDNAQVILVGNKCD 138

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVD 184
             + R V   +G+L AE  GF +FE SA+    + + F+    +I D
Sbjct: 139 MEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 185


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  103 bits (257), Expect = 2e-22
 Identities = 55/186 (29%), Positives = 102/186 (54%), Gaps = 12/186 (6%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +GN+ VGK+  + RY +  F   +++T+GID+ V  V+  D+ IK+ I+D AG   
Sbjct: 24  KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           +  +   +Y+   G +L+YD+  ++SF A+  W  ++K       + +N   ++  NK D
Sbjct: 84  YRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTY-----SWDNAQVILVGNKCD 138

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVD-LCE--NGGKRPT 194
               R V   +GR  A+  GF +FE SA+    + ++F+     +VD +CE  N    P+
Sbjct: 139 LEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFE----RLVDVICEKMNESLEPS 194

Query: 195 TNSSAS 200
           ++S ++
Sbjct: 195 SSSGSN 200


>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  103 bits (256), Expect = 2e-22
 Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)

Query: 13  RSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDM 72
           + + +KVI +G++ VGK+ ++ +Y  K+F ++Y ATIG D+   +V V DR + + I+D 
Sbjct: 5   KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64

Query: 73  AGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVC 132
           AG   F  +   FY+     +LV+DV   ++F  LD+W  E   +  P  + EN  FVV 
Sbjct: 65  AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR-DPENFPFVVL 123

Query: 133 ANKIDCTKHRCVDESEGRLWAESKGFL-YFETSAQTGEGINEMFQT 177
            NKID  ++R V     + W  SK  + YFETSA+    + + FQT
Sbjct: 124 GNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  103 bits (256), Expect = 2e-22
 Identities = 49/158 (31%), Positives = 88/158 (55%), Gaps = 5/158 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +GNA VGK+C+++R+ +  F     ATIG+D+ +  V +   ++K+ I+D AG   
Sbjct: 11  KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 70

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+    +IL YD+  ++SF  L  WL E++Q          +I V+  NKID
Sbjct: 71  FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-----NKVITVLVGNKID 125

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
             + R V +     ++E++   Y ETSA+  + + ++F
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF 163


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  102 bits (254), Expect = 4e-22
 Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 5/167 (2%)

Query: 17  IKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHP 76
           +K++ +G + VGKS ++ R+ +  F  +  ATIG+D+ V  + V   + K+ I+D AG  
Sbjct: 9   LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68

Query: 77  FFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKI 136
            F  +   +Y+  QGVILVYDV ++D+F  LD WL     EL  +    +I+ ++  NKI
Sbjct: 69  RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWL----NELETYCTRNDIVNMLVGNKI 124

Query: 137 DCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIV 183
           D  ++R VD +EG  +A     L+ E SA+T +G+   F+     I+
Sbjct: 125 D-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKII 170


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  102 bits (253), Expect = 5e-22
 Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 7/175 (4%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGK+C+I R+ E  F + Y++TIGID+ +  V +  ++IK+ ++D AG   
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G+IL YD+  + SF+ +  W+  + +       +E+++     NK D
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS--AGVEHLLL---GNKCD 248

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKR 192
               R V + +    A   G  +FETSA++   ++E F +    I  L ++GG+R
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSGGRR 301


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  102 bits (253), Expect = 5e-22
 Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 7/175 (4%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGK+C+I R+ E  F + Y++TIGID+ +  V +  ++IK+ ++D AG   
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G+IL YD+  + SF+ +  W+  + +       +E+++     NK D
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS--AGVEHLLL---GNKCD 248

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKR 192
               R V + +    A   G  +FETSA++   ++E F +    I  L ++GG+R
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSGGRR 301


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  102 bits (253), Expect = 5e-22
 Identities = 52/175 (29%), Positives = 97/175 (55%), Gaps = 7/175 (4%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +G++ VGK+C+I R+ E  F + Y++TIGID+ +  V +  ++IK+ ++D AG   
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           F  +   +Y+   G+IL YD+  + SF+ +  W+  + +       +E+++     NK D
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS--AGVEHLLL---GNKCD 248

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCENGGKR 192
               R V + +    A   G  +FETSA++   ++E F +    I  L ++GG+R
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSGGRR 301


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  101 bits (251), Expect = 8e-22
 Identities = 51/163 (31%), Positives = 93/163 (57%), Gaps = 5/163 (3%)

Query: 15  LRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAG 74
           L  K++ +G++ VGK+C++ R+ +  F + +++TIGID+ +  V ++ ++IK+ I+D AG
Sbjct: 8   LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67

Query: 75  HPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCAN 134
              F+ +   +Y+   G++LVYD+    SF+ +  WL    + +  H N E++  ++  N
Sbjct: 68  QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL----RNIDEHAN-EDVERMLLGN 122

Query: 135 KIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQT 177
           K D    R V + +G   A   G  +FETSA+    I + F T
Sbjct: 123 KCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLT 165


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  100 bits (250), Expect = 1e-21
 Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +GN+ VGK+  + RY +  F S +++T+GID+ V  V   ++ IK+ I+D AG   
Sbjct: 32  KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQER 91

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           +  +   +Y+   G IL+YD+  ++SF+A+  W  ++K       + +N   ++  NK D
Sbjct: 92  YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY-----SWDNAQVILVGNKCD 146

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVD 184
               R +    G+   E  GF +FETSA+    + + F+     I D
Sbjct: 147 MEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICD 193


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  100 bits (250), Expect = 1e-21
 Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 5/159 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNIFDMAGHPF 77
           K++ +GN+ VGK+  + RY +  F   +++T+GID+ V  ++  D+ IK+ I+D AG   
Sbjct: 24  KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 83

Query: 78  FYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKID 137
           +  +   +Y+   G IL+YD+  ++SF+A+  W  ++K       + +N   ++  NK D
Sbjct: 84  YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY-----SWDNAQVLLVGNKCD 138

Query: 138 CTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
               R V    GR  A+  GF +FE SA+    + + F+
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFE 177


>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 6/167 (3%)

Query: 10  EPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNI 69
           E    + IK++ +GN  VGKS +I+RYC+  F   Y  TIG+D+   ++ V D ++++ +
Sbjct: 3   EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLML 62

Query: 70  FDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIF 129
           +D AG   F  +   +Y+  Q  +LV+    ++SF+A+ +W  ++  E+G      +I  
Sbjct: 63  WDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG------DIPT 116

Query: 130 VVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
           V+  NKID     C+   E    A+     ++ TS +    +NE+F+
Sbjct: 117 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFK 163


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 6/166 (3%)

Query: 11  PGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVS-KYLATIGIDYGVTKVHVRDREIKVNI 69
           P   L  KV+ +G+  VGK+C + ++ +  F+S  ++AT+GID+    V V    +K+ I
Sbjct: 24  PSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQI 83

Query: 70  FDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIF 129
           +D AG   F  V + +Y+D Q ++L+YD+  K SFD + AWL E+ +         +++ 
Sbjct: 84  WDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA-----QRDVVI 138

Query: 130 VVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
           ++  NK D +  R +   +G   A   G  + ETSA+TG  +   F
Sbjct: 139 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 26/210 (12%)

Query: 2   EANMPKRKEPGRSLRI-KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHV 60
           EA   +   P    R+ K++ +GN+ VGK+  ++R+CE RF     AT+GIDY V  ++V
Sbjct: 530 EALCKEESSPSAPDRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVGIDYRVKTLNV 589

Query: 61  RDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGP 120
            + ++ + ++D AG   +  +  +F++   GVI++YD+  K SF ++  WL+ +++ +G 
Sbjct: 590 DNSQVALQLWDTAGQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSVEEAVG- 648

Query: 121 HGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYI 180
               + +  ++  NK+D  K R V    G   A     +++E SA +G    E       
Sbjct: 649 ----DRVPVLLLGNKLDNEKEREVPRGLGEQLATENNLIFYECSAYSGHNTKE------- 697

Query: 181 SIVDLCENGGKRPTTNSSASFTKEQADAIR 210
           S++ L             A F KEQ D +R
Sbjct: 698 SLLHL-------------ARFLKEQEDTVR 714


>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 6/167 (3%)

Query: 10  EPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKVNI 69
           E    + IK++ +GN  VGKS +I+RYC+  F   Y  TIG+D+   ++ V D ++++ +
Sbjct: 3   EEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLML 62

Query: 70  FDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIF 129
           +D AG   F  +   +Y+  Q  +LV+    ++SF+A+ +W  ++  E+G      +I  
Sbjct: 63  WDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG------DIPT 116

Query: 130 VVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQ 176
           V+  NKID     C+   E    A+     ++ TS +    +NE+F+
Sbjct: 117 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFK 163


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 98.2 bits (243), Expect = 7e-21
 Identities = 49/172 (28%), Positives = 99/172 (57%), Gaps = 8/172 (4%)

Query: 7   KRKEPGR--SLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDRE 64
           +RK+P R    +++VI +G+  VGK+ +++R+ +  F     +T+G+D+ +  V +R ++
Sbjct: 31  RRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKK 90

Query: 65  IKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNM 124
           I++ I+D AG   F  + + +Y+  +G+ILVYD+ +K++FD L  W+  + +        
Sbjct: 91  IRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS----- 145

Query: 125 ENIIFVVCANKIDCTKHRCVDESEGRLWAES-KGFLYFETSAQTGEGINEMF 175
           E+   ++  NK+DC   R +   +G  +A+   G  + E SA+    ++E+F
Sbjct: 146 EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score = 97.8 bits (242), Expect = 9e-21
 Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 9/213 (4%)

Query: 3   ANMPKRKEPGRSL-RIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVR 61
           A  P     G  + + K++ +G + VGKS ++ R+ + +F     +TIG  +    V + 
Sbjct: 6   ATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLD 65

Query: 62  DREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPH 121
           D  +K  I+D AG   ++ +   +Y+  Q  I+VYD+  ++SF     W+ E++++  P 
Sbjct: 66  DTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP- 124

Query: 122 GNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYIS 181
               NI+  +  NK D    R VD  E + +A+    L+ ETSA+T   +NE+F      
Sbjct: 125 ----NIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAI--- 177

Query: 182 IVDLCENGGKRPTTNSSASFTKEQADAIRRIRN 214
              L +N  + P  NS+     +  +  +  RN
Sbjct: 178 AKKLPKNEPQNPGANSARGRGVDLTEPTQPTRN 210


>gi|11967981 RAB17, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 5/199 (2%)

Query: 8   RKEPGRSLRIKVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVHVRDREIKV 67
           R  P +    K++ +G+  VGKS +  RY +  F S  L T+G  +    V V    +K+
Sbjct: 11  RAAPSQPRVFKLVLLGSGSVGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKL 69

Query: 68  NIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENI 127
            I+D AG   ++ V + +++     +LVYD+ +KDSF     WL ++++EL P      +
Sbjct: 70  EIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHP----GEV 125

Query: 128 IFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVDLCE 187
           + ++  NK D ++ R V   EG+ +A+S+  L+ ETSA+    ++E+F T    ++   +
Sbjct: 126 LVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQELLQRSD 185

Query: 188 NGGKRPTTNSSASFTKEQA 206
             G+    +++ +  K  A
Sbjct: 186 EEGQALRGDAAVALNKGPA 204


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 6/159 (3%)

Query: 18  KVISMGNAEVGKSCIIKRYCEKRFVS-KYLATIGIDYGVTKVHVRDREIKVNIFDMAGHP 76
           KV+ +G++ VGK+C++ R+ +  F++  +++T+GID+    + V   ++K+ ++D AG  
Sbjct: 65  KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124

Query: 77  FFYEVRNEFYKDTQGVILVYDVGQKDSFDALDAWLAEMKQELGPHGNMENIIFVVCANKI 136
            F  V + +Y+D   ++L+YDV  K SFD + AWL E+  E   H    ++  ++  NK+
Sbjct: 125 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEI-HEYAQH----DVALMLLGNKV 179

Query: 137 DCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMF 175
           D    R V   +G   A+  G  + ETSA+TG  ++  F
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAF 218


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,233,168
Number of Sequences: 37866
Number of extensions: 406260
Number of successful extensions: 1237
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 868
Number of HSP's gapped (non-prelim): 263
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.