Guide to the Human Genome
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Name: LY6K Sequence: fasta or formatted (120aa) NCBI GI: 237858795
Description:

lymphocyte antigen 6 complex, locus K isoform 2

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [165aa] lymphocyte antigen 6 complex, locus K isoform 1
alt prot [105aa] lymphocyte antigen 6 complex, locus K isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         10           2
 C cysteine            4.2          5           1
 D aspartate           5.8          7           1
 E glutamate           5.8          7           1
 F phenylalanine       1.7          2           1
 G glycine             1.7          2           1
 H histidine           5.0          6           1
 I isoleucine          0.8          1           1
 K lysine              1.7          2           1
 L leucine             9.2         11           3
 M methionine          1.7          2           1
 N asparagine          3.3          4           1
 P proline            12.5         15           2
 Q glutamine           4.2          5           1
 R arginine           10.0         12           2
 S serine              4.2          5           1
 T threonine           7.5          9           2
 V valine              8.3         10           2
 W tryptophan          2.5          3           1
 Y tyrosine            1.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 6 complex, locus K isoform 2 [Ho... 
LY6K                  0.572   lymphocyte antigen 6 complex, locus K isoform 3 [Ho...
LY6K                  0.564   lymphocyte antigen 6 complex, locus K isoform 1 [Ho...
OTOG                  0.034   PREDICTED: otogelin isoform 2 
OTOG                  0.034   PREDICTED: otogelin isoform 1 
OTOG                  0.034   PREDICTED: otogelin isoform 1 
ZMYND8                0.025   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.025   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.025   zinc finger, MYND-type containing 8 isoform b 
GML                   0.021   glycosylphosphatidylinositol anchored molecule like p...
BEND4                 0.021   BEN domain containing 4 isoform b 
BEND4                 0.021   BEN domain containing 4 isoform a 
ERC2                  0.021   cytomatrix protein p110 
OTOG                  0.017   PREDICTED: otogelin isoform 1 
OTOG                  0.017   PREDICTED: otogelin isoform 2 
OTOG                  0.017   PREDICTED: otogelin isoform 2 
HEPACAM               0.017   hepatocyte cell adhesion molecule 
USP16                 0.017   ubiquitin specific protease 16 isoform a 
USP16                 0.017   ubiquitin specific protease 16 isoform a 
F12                   0.017   coagulation factor XII precursor 
LOC100292543          0.017   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.017   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.017   PREDICTED: hypothetical protein XP_002342921 
PIP5K1A               0.017   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1A               0.017   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1A               0.017   phosphatidylinositol-4-phosphate 5-kinase, type I, al...
KLF17                 0.017   zinc finger protein 393 
MICAL2                0.017   microtubule associated monoxygenase, calponin and LIM...
ROBO3                 0.013   roundabout, axon guidance receptor, homolog 3 
EML5                  0.013   echinoderm microtubule associated protein like 5 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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