Guide to the Human Genome
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Name: LY6K Sequence: fasta or formatted (105aa) NCBI GI: 237858797
Description:

lymphocyte antigen 6 complex, locus K isoform 3

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [165aa] lymphocyte antigen 6 complex, locus K isoform 1
alt prot [120aa] lymphocyte antigen 6 complex, locus K isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         11           2
 C cysteine            5.7          6           1
 D aspartate           5.7          6           1
 E glutamate           7.6          8           1
 F phenylalanine       1.0          1           1
 G glycine             3.8          4           1
 H histidine           1.9          2           1
 I isoleucine          1.0          1           1
 K lysine              1.0          1           1
 L leucine            12.4         13           3
 M methionine          1.0          1           1
 N asparagine          3.8          4           1
 P proline             5.7          6           1
 Q glutamine           4.8          5           1
 R arginine           10.5         11           2
 S serine              2.9          3           1
 T threonine           6.7          7           1
 V valine              9.5         10           2
 W tryptophan          3.8          4           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 6 complex, locus K isoform 3 [Ho... 
LY6K                  0.678   lymphocyte antigen 6 complex, locus K isoform 2 [Ho...
LY6K                  0.673   lymphocyte antigen 6 complex, locus K isoform 1 [Ho...
PIKFYVE               0.045   phosphatidylinositol-3-phosphate 5-kinase type III ...
PIKFYVE               0.045   phosphatidylinositol-3-phosphate 5-kinase type III i...
GML                   0.030   glycosylphosphatidylinositol anchored molecule like p...
ZMYND8                0.030   zinc finger, MYND-type containing 8 isoform c 
ZMYND8                0.030   zinc finger, MYND-type containing 8 isoform a 
ZMYND8                0.030   zinc finger, MYND-type containing 8 isoform b 
LRP1                  0.010   low density lipoprotein-related protein 1 
ZMYND11               0.010   zinc finger, MYND domain containing 11 isoform a [H...
ZMYND11               0.010   zinc finger, MYND domain containing 11 isoform a [H...
LYNX1                 0.010   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.010   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.010   Ly-6 neurotoxin-like protein 1 isoform c 
LYNX1                 0.010   Ly-6 neurotoxin-like protein 1 isoform a 
FAM19A3               0.010   family with sequence similarity 19 (chemokine (C-C m...
C2orf21               0.005   chromosome 2 open reading frame 21 isoform 1 
ELFN2                 0.005   leucine rich repeat containing 62 
LPA                   0.005   lipoprotein Lp(a) precursor 
LOC100292543          0.005   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.005   PREDICTED: similar to RIKEN cDNA D730001G18 
LOC100288207          0.005   PREDICTED: hypothetical protein XP_002342921 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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