Guide to the Human Genome
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Search of human proteins with 237858668

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi...   327   4e-90
gi|237858664 hypothetical protein LOC123207 isoform b [Homo sapi...   248   1e-66
gi|237858662 hypothetical protein LOC123207 isoform a [Homo sapi...   244   2e-65
gi|237858670 hypothetical protein LOC123207 isoform e [Homo sapi...   244   3e-65
gi|237858666 hypothetical protein LOC123207 isoform c [Homo sapi...   242   9e-65
gi|62243734 signal transducing adaptor family member 2 isoform 1...    59   1e-09
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]                     56   1e-08
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]                     56   1e-08
gi|28212280 hypothetical protein LOC283579 [Homo sapiens]              56   1e-08
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ...    55   3e-08
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]                     55   3e-08
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]          54   5e-08
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]          54   5e-08
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]               53   1e-07
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]           50   7e-07
gi|224494572 hypothetical protein LOC401082 [Homo sapiens]             49   2e-06
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]                   49   2e-06
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]          49   2e-06
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ...    49   3e-06
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ...    49   3e-06
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ...    49   3e-06
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap...    49   3e-06
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]            48   3e-06
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]            48   3e-06
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]            48   3e-06
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...    46   2e-05
gi|226371669 discs large homolog 7 isoform b [Homo sapiens]            45   3e-05
gi|148839316 NIMA-related kinase 4 [Homo sapiens]                      44   6e-05
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     42   2e-04
gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo sapi...    42   2e-04

>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
           sapiens]
          Length = 167

 Score =  327 bits (837), Expect = 4e-90
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60
           MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
Sbjct: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60

Query: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
           GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
Sbjct: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120

Query: 121 DKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167
           DKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL
Sbjct: 121 DKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167


>gi|237858664 hypothetical protein LOC123207 isoform b [Homo
           sapiens]
          Length = 167

 Score =  248 bits (634), Expect = 1e-66
 Identities = 134/167 (80%), Positives = 135/167 (80%), Gaps = 21/167 (12%)

Query: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60
           MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
Sbjct: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60

Query: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
           GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
Sbjct: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120

Query: 121 DKTG---------------------SCYIAQAGLELLASSDLPASAS 146
           DK G                        +A   L LL SS  PASAS
Sbjct: 121 DKVGLALFFFFLRQNLALSPKLECSGVVLAHCNLHLLGSSYSPASAS 167


>gi|237858662 hypothetical protein LOC123207 isoform a [Homo
           sapiens]
          Length = 153

 Score =  244 bits (624), Expect = 2e-65
 Identities = 127/139 (91%), Positives = 131/139 (94%), Gaps = 2/139 (1%)

Query: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60
           MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
Sbjct: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60

Query: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
           GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
Sbjct: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120

Query: 121 DKTGSCYIAQAGLELLASS 139
           DK G     +  ++LLAS+
Sbjct: 121 DKGGKS--REKVVKLLAST 137


>gi|237858670 hypothetical protein LOC123207 isoform e [Homo
           sapiens]
          Length = 149

 Score =  244 bits (622), Expect = 3e-65
 Identities = 126/134 (94%), Positives = 126/134 (94%), Gaps = 2/134 (1%)

Query: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60
           MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
Sbjct: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60

Query: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
           GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
Sbjct: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120

Query: 121 DKTGSCYIAQAGLE 134
           DK   CY     LE
Sbjct: 121 DKL--CYSIPQQLE 132


>gi|237858666 hypothetical protein LOC123207 isoform c [Homo
           sapiens]
          Length = 153

 Score =  242 bits (618), Expect = 9e-65
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60
           MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK
Sbjct: 1   MLRLRSGLRHLRATPNTRGSARLLCAEMPKKAGATTKGKSQSKEPERPLPPLGPVAVDPK 60

Query: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120
           GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL
Sbjct: 61  GCVTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVL 120

Query: 121 DK 122
           DK
Sbjct: 121 DK 122


>gi|62243734 signal transducing adaptor family member 2 isoform 1
           [Homo sapiens]
          Length = 449

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 32/39 (82%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPAL 162
           G  ++AQAGLELL SSD P SASQSAGITGVSHHT P L
Sbjct: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHL 399


>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 30/50 (60%), Positives = 36/50 (72%)

Query: 118 VVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167
           VVL +T   ++ QAGLELL S D P SASQSAGITGVSH  +P L ++ L
Sbjct: 351 VVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVLRL 400


>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 30/50 (60%), Positives = 36/50 (72%)

Query: 118 VVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167
           VVL +T   ++ QAGLELL S D P SASQSAGITGVSH  +P L ++ L
Sbjct: 351 VVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVLRL 400


>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
          Length = 122

 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 29/37 (78%), Positives = 31/37 (83%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQP 160
           GS Y AQAGLELL SS+ PASASQSAGITGVSH  +P
Sbjct: 32  GSHYFAQAGLELLGSSNPPASASQSAGITGVSHCARP 68


>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
           sapiens]
          Length = 402

 Score = 55.1 bits (131), Expect = 3e-08
 Identities = 29/50 (58%), Positives = 36/50 (72%)

Query: 118 VVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167
           VVL +T   ++ QAGLELL S D P SASQSAGITGV+H  +P L ++ L
Sbjct: 351 VVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVLRL 400


>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
          Length = 402

 Score = 55.1 bits (131), Expect = 3e-08
 Identities = 29/50 (58%), Positives = 36/50 (72%)

Query: 118 VVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPALLLISL 167
           VVL +T   ++ QAGLELL S D P SASQSAGITGV+H  +P L ++ L
Sbjct: 351 VVLVETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVLRL 400


>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
          Length = 606

 Score = 54.3 bits (129), Expect = 5e-08
 Identities = 28/39 (71%), Positives = 30/39 (76%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPAL 162
           G  +  QA LELL SSDLPASASQSAGITGV+H  QP L
Sbjct: 78  GFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGL 116


>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
          Length = 629

 Score = 54.3 bits (129), Expect = 5e-08
 Identities = 28/39 (71%), Positives = 30/39 (76%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPAL 162
           G  +  QA LELL SSDLPASASQSAGITGV+H  QP L
Sbjct: 78  GFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGL 116


>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
          Length = 586

 Score = 52.8 bits (125), Expect = 1e-07
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 68  HAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDKTGSCY 127
           H+  G+  +  T  T E  ++     P + E         +++  L+     L+ T S +
Sbjct: 54  HSSSGTLSSLETVSTQELYSIPEDQEPEDQEPEEPTPAPWARLWALQDGFANLE-TESGH 112

Query: 128 IAQAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164
           + Q+ LELL SSD PASASQSAGI GV HH +P   L
Sbjct: 113 VTQSDLELLLSSDPPASASQSAGIRGVRHHPRPVCSL 149


>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
          Length = 858

 Score = 50.4 bits (119), Expect = 7e-07
 Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 2/65 (3%)

Query: 101 AELCRYLSKVLELRKSDVVLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQP 160
           AE  R   +  E   +++V  K  SC +AQAGLELL SS   A ASQSAGITG+SH T  
Sbjct: 676 AEAGRSRGQEFETSLANIV--KPQSCCVAQAGLELLVSSSPSALASQSAGITGMSHCTWL 733

Query: 161 ALLLI 165
            +L +
Sbjct: 734 VVLFL 738


>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
          Length = 95

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQP 160
           GS Y+AQAGLELL SS+ P SA Q+AG TG+ H T P
Sbjct: 16  GSHYVAQAGLELLGSSNSPTSAYQAAGTTGLHHCTPP 52


>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
          Length = 1318

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)

Query: 122 KTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
           +TGS Y+AQAGLE LAS D  ASAS +AGITG  H T+
Sbjct: 42  ETGSRYVAQAGLEPLASGDPSASASHAAGITGSRHRTR 79


>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
          Length = 176

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 27/34 (79%)

Query: 127 YIAQAGLELLASSDLPASASQSAGITGVSHHTQP 160
           Y+AQA LELL SS+ PASASQS GITG SH  +P
Sbjct: 5   YVAQADLELLTSSNPPASASQSTGITGGSHRARP 38


>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 130 QAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164
           QAG++LL +SDLP  ASQS  ITGVSHH QP  L+
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLI 221


>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 130 QAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164
           QAG++LL +SDLP  ASQS  ITGVSHH QP  L+
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLI 221


>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 130 QAGLELLASSDLPASASQSAGITGVSHHTQPALLL 164
           QAG++LL +SDLP  ASQS  ITGVSHH QP  L+
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLI 221


>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
          Length = 1079

 Score = 48.5 bits (114), Expect = 3e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)

Query: 122  KTGSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
            +TG  ++ QA LELL S  L ASASQSAGITGVSHH +
Sbjct: 1042 ETGFHHVGQACLELLTSGGLLASASQSAGITGVSHHAR 1079


>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
           G  ++ QAGLELL SSD P SASQ+A ITGVSH  Q
Sbjct: 2   GLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
           G  ++ QAGLELL SSD P SASQ+A ITGVSH  Q
Sbjct: 2   GLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 142

 Score = 48.1 bits (113), Expect = 3e-06
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
           G  ++ QAGLELL SSD P SASQ+A ITGVSH  Q
Sbjct: 2   GLYHVGQAGLELLTSSDPPTSASQNAEITGVSHRAQ 37


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query: 97  GEANAELCRYLSKVLELRKSDVVLDKTGSCYIAQAGLELLASSDLPASASQSAGIT 152
           G  +A    +L    + +   V L + G  ++ QAGLELL SSDLP SASQSAGIT
Sbjct: 13  GAISAHCSLHLPDSSDFQLIFVFLVEMGFHHVGQAGLELLISSDLPTSASQSAGIT 68


>gi|226371669 discs large homolog 7 isoform b [Homo sapiens]
          Length = 842

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 119 VLDKTGSCYIAQAGLELLASSDLPASASQSAGITGVS 155
           +LD  GSCY+A+AGLE+L SSD   SAS+ AG T  S
Sbjct: 803 LLDSVGSCYVARAGLEVLGSSDPTTSASRVAGTTARS 839


>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
          Length = 841

 Score = 43.9 bits (102), Expect = 6e-05
 Identities = 21/32 (65%), Positives = 24/32 (75%)

Query: 128 IAQAGLELLASSDLPASASQSAGITGVSHHTQ 159
           +A + L LL SSD PASAS+ AGITGV HH Q
Sbjct: 471 LAHSNLRLLGSSDSPASASRVAGITGVCHHAQ 502


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 21/37 (56%), Positives = 22/37 (59%)

Query: 125  SCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPA 161
            S   A     L  SSD PASASQ  GITG  HHTQP+
Sbjct: 1110 SAISAHCNFRLPGSSDFPASASQVDGITGACHHTQPS 1146


>gi|205277366 hypothetical protein LOC201158 isoform 1 [Homo
           sapiens]
          Length = 276

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 22/31 (70%), Positives = 25/31 (80%)

Query: 125 SCYIAQAGLELLASSDLPASASQSAGITGVS 155
           S +IAQ GL++L S D PASA QSAGITGVS
Sbjct: 157 SRHIAQTGLKVLGSRDPPASAFQSAGITGVS 187


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.128    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,440,841
Number of Sequences: 37866
Number of extensions: 266310
Number of successful extensions: 1125
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 961
Number of HSP's gapped (non-prelim): 191
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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