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Search of human proteins with 236460752
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|236460752 Kruppel-like factor 6 isoform C [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|236460752 Kruppel-like factor 6 isoform C [Homo sapiens] 489 e-139
gi|37655157 Kruppel-like factor 6 isoform A [Homo sapiens] 466 e-132
gi|236460555 Kruppel-like factor 6 isoform B [Homo sapiens] 390 e-109
gi|4507829 Kruppel-like factor 7 (ubiquitous) [Homo sapiens] 159 3e-39
gi|21071074 Kruppel-like factor 12 [Homo sapiens] 73 2e-13
gi|156151371 Kruppel-like factor 3 (basic) [Homo sapiens] 69 4e-12
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 68 8e-12
gi|4557375 Kruppel-like factor 9 [Homo sapiens] 65 7e-11
gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens] 64 9e-11
gi|14251215 Kruppel-like factor 5 [Homo sapiens] 62 4e-10
gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens] 60 2e-09
gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens] 60 2e-09
gi|38372901 Sp1 transcription factor isoform a [Homo sapiens] 60 2e-09
gi|218751903 Sp1 transcription factor isoform b [Homo sapiens] 60 2e-09
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 58 6e-09
gi|7662494 Kruppel-like factor 15 [Homo sapiens] 58 6e-09
gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] 57 2e-08
gi|13994287 BTE-binding protein 4 [Homo sapiens] 57 2e-08
gi|67010025 Sp4 transcription factor [Homo sapiens] 55 4e-08
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens] 55 5e-08
gi|4507503 Kruppel-like factor 11 [Homo sapiens] 54 9e-08
gi|51468067 Sp5 transcription factor [Homo sapiens] 54 1e-07
gi|22902136 osterix [Homo sapiens] 54 2e-07
gi|7706469 Kruppel-like factor [Homo sapiens] 54 2e-07
gi|223646113 Sp9 transcription factor homolog [Homo sapiens] 53 2e-07
gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens] 53 3e-07
gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens] 53 3e-07
gi|42263098 Sp6 transcription factor [Homo sapiens] 52 4e-07
gi|104294874 zinc finger protein 393 [Homo sapiens] 51 1e-06
gi|73760403 Kruppel-like factor 10 isoform b [Homo sapiens] 49 3e-06
>gi|236460752 Kruppel-like factor 6 isoform C [Homo sapiens]
Length = 237
Score = 489 bits (1260), Expect = e-139
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ
Sbjct: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
Query: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS
Sbjct: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
Query: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS
Sbjct: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
Query: 181 GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWPCT 237
GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWPCT
Sbjct: 181 GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWPCT 237
>gi|37655157 Kruppel-like factor 6 isoform A [Homo sapiens]
Length = 283
Score = 466 bits (1199), Expect = e-132
Identities = 228/234 (97%), Positives = 229/234 (97%)
Query: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ
Sbjct: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
Query: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS
Sbjct: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
Query: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS
Sbjct: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
Query: 181 GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTG P +W
Sbjct: 181 GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGEKPYRCSW 234
>gi|236460555 Kruppel-like factor 6 isoform B [Homo sapiens]
Length = 241
Score = 390 bits (1001), Expect = e-109
Identities = 197/229 (86%), Positives = 202/229 (88%), Gaps = 12/229 (5%)
Query: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ
Sbjct: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
Query: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS
Sbjct: 61 EDLWTKIILAREKKEESELKISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS 120
Query: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS
Sbjct: 121 PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTS 180
Query: 181 GKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFP 229
GKPG+K +RC + GC + +S L H R HTG P
Sbjct: 181 GKPGEK------------PYRCSWEGCEWRFARSDELTRHFRKHTGAKP 217
>gi|4507829 Kruppel-like factor 7 (ubiquitous) [Homo sapiens]
Length = 302
Score = 159 bits (401), Expect = 3e-39
Identities = 107/272 (39%), Positives = 134/272 (49%), Gaps = 57/272 (20%)
Query: 1 MDVLPMCSIFQELQIVHETGYFSALPSLEEYWQQTCLELERYLQSEPCYVSASEIKFDSQ 60
MDVL SIFQELQ+VH+TGYFSALPSLEE WQQTCLELERYLQ+EP +S +
Sbjct: 1 MDVLASYSIFQELQLVHDTGYFSALPSLEETWQQTCLELERYLQTEPRRISET------- 53
Query: 61 EDLWTKIILAREKKEESELKISSSPPE---------DTLISPSFCYNLETNSLNSDVSSE 111
E+ + + +SPP D L+ P E +S + S
Sbjct: 54 ------------FGEDLDCFLHASPPPCIEESFRRLDPLLLPVEAAICEKSSAVDILLSR 101
Query: 112 SSDSSEELSPTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSR---EPSQLWGCVPG- 167
SE +S V+ +L++ + TPPSSPELSR + SQ V G
Sbjct: 102 DKLLSETCLSLQPASSSLDSYTAVNQAQLNAVTSLTPPSSPELSRHLVKTSQTLSAVDGT 161
Query: 168 -------------------------ELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVHRC 202
+ + G V+SG S +A P+ ++RVHRC
Sbjct: 162 VTLKLVAKKAALSSVKVGGVATAAAAVTAAGAVKSGQSDSDQGGLGAEACPENKKRVHRC 221
Query: 203 HFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
FNGCRKVYTKSSHLKAHQRTHTG P +W
Sbjct: 222 QFNGCRKVYTKSSHLKAHQRTHTGEKPYKCSW 253
>gi|21071074 Kruppel-like factor 12 [Homo sapiens]
Length = 402
Score = 73.2 bits (178), Expect = 2e-13
Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 113 SDSSEELSPTAKFTS-DPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPS 171
SDS ++ P S + G +S + V +P S +R +Q + C S
Sbjct: 238 SDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFPCSI----S 293
Query: 172 PGKVRSGTSGKPGDKGNGDASPDGR-RRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPG 230
P + S + + SPD R RR+HRC F GC KVYTKSSHLKAH+RTHTG P
Sbjct: 294 PFSIESTRRQRRSE------SPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPY 347
Query: 231 LTTWP-CT 237
TW CT
Sbjct: 348 KCTWEGCT 355
>gi|156151371 Kruppel-like factor 3 (basic) [Homo sapiens]
Length = 345
Score = 68.9 bits (167), Expect = 4e-12
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
Query: 182 KPGDKGNGDASPDG--RRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWP-CT 237
+PG + SPD +RR+HRC ++GC KVYTKSSHLKAH+RTHTG P TW CT
Sbjct: 240 QPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCT 298
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 67.8 bits (164), Expect = 8e-12
Identities = 40/91 (43%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 149 PSSPELSREPSQLWGCVPGELPSPGKVRSGTSGKPG-----DKGNGDASPDGRRRVHRCH 203
P SP S EP G P P P SG+PG +G A + +R H+CH
Sbjct: 117 PPSPAWS-EPEPEAGLEPEREPGPAG-----SGEPGLRQRVRRGRSRADLESPQRKHKCH 170
Query: 204 FNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
+ GC KVY KSSHLKAH RTHTG P +W
Sbjct: 171 YAGCEKVYGKSSHLKAHLRTHTGERPFACSW 201
Score = 28.1 bits (61), Expect = 6.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 207 CRKVYTKSSHLKAHQRTHTGVFPGL 231
C K + +S HL H R H PG+
Sbjct: 232 CEKRFMRSDHLTKHARRHANFHPGM 256
>gi|4557375 Kruppel-like factor 9 [Homo sapiens]
Length = 244
Score = 64.7 bits (156), Expect = 7e-11
Identities = 41/94 (43%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 142 SSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVHR 201
S VT+ SSP S E Q PG PSP + PG G + + R H+
Sbjct: 97 SDVTTESGSSPSHSPEERQ----DPGSAPSPLSLLH-----PGVAAKGKHASEKR---HK 144
Query: 202 CHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWP 235
C ++GC KVY KSSHLKAH R HTG P TWP
Sbjct: 145 CPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWP 178
>gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens]
Length = 359
Score = 64.3 bits (155), Expect = 9e-11
Identities = 38/84 (45%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 166 PGELPSPGK---VRSGTSGKPGDKG-----------NGDASPD-GRRRVHRCHFNGCRKV 210
P E+PS + + SG+S +G G+ S D RRR+H+C F GC KV
Sbjct: 225 PLEIPSDSEESTIESGSSALQSLQGLQQEPAAMAQMQGEESLDLKRRRIHQCDFAGCSKV 284
Query: 211 YTKSSHLKAHQRTHTGVFPGLTTW 234
YTKSSHLKAH+R HTG P TW
Sbjct: 285 YTKSSHLKAHRRIHTGEKPYKCTW 308
>gi|14251215 Kruppel-like factor 5 [Homo sapiens]
Length = 457
Score = 62.0 bits (149), Expect = 4e-10
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 188 NGDASPD-GRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
N ++PD +RR+H C + GC KVYTKSSHLKAH RTHTG P TW
Sbjct: 360 NRRSNPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTW 407
>gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens]
Length = 508
Score = 60.1 bits (144), Expect = 2e-09
Identities = 53/154 (34%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 87 EDTLISPSFCYNLETNSLNSDVSSESSDSSEELSPTAKFTSDPIGEVLVSSGKLSSSVTS 146
+ +L SP YN + + L+ S S SS LSP + D VL S S+
Sbjct: 259 QTSLHSPLGGYNSDYSGLSHSAFS-SGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPL 317
Query: 147 TPPSSPELSREPSQLWGCVPGELPSPGKVRSG--TSGKPGDKGNGDASPDG----RRRVH 200
LS PS G G S + SG T P + P G R+ +H
Sbjct: 318 AGAGGSMLSAGPSAPLG---GSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLH 374
Query: 201 RCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
CH GC KVY K+SHLKAH R HTG P + W
Sbjct: 375 SCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNW 408
>gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens]
Length = 490
Score = 60.1 bits (144), Expect = 2e-09
Identities = 53/154 (34%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 87 EDTLISPSFCYNLETNSLNSDVSSESSDSSEELSPTAKFTSDPIGEVLVSSGKLSSSVTS 146
+ +L SP YN + + L+ S S SS LSP + D VL S S+
Sbjct: 241 QTSLHSPLGGYNSDYSGLSHSAFS-SGASSHLLSPAGQHLMDGFKPVLPGSYPDSAPSPL 299
Query: 147 TPPSSPELSREPSQLWGCVPGELPSPGKVRSG--TSGKPGDKGNGDASPDG----RRRVH 200
LS PS G G S + SG T P + P G R+ +H
Sbjct: 300 AGAGGSMLSAGPSAPLG---GSPRSSARRYSGRATCDCPNCQEAERLGPAGASLRRKGLH 356
Query: 201 RCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
CH GC KVY K+SHLKAH R HTG P + W
Sbjct: 357 SCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNW 390
>gi|38372901 Sp1 transcription factor isoform a [Homo sapiens]
Length = 785
Score = 60.1 bits (144), Expect = 2e-09
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 43/167 (25%)
Query: 111 ESSDSSEELSPTAKFTSDPIGEVLVSSGKLSS-----SVTSTPPSSPELSREPSQLWGCV 165
++S S+ L+P A S P G V V++ +LSS ++ + + + P Q
Sbjct: 494 QTSSSNTTLTPIASAASIPAGTVTVNAAQLSSMPGLQTINLSALGTSGIQVHPIQGLPLA 553
Query: 166 PGELPSPGKVRSGTSGKPGD--------KGNGDASPD----------------------- 194
P + G G GD G+ SPD
Sbjct: 554 IANAPGDHGAQLGLHGAGGDGIHDDTAGGEEGENSPDAQPQAGRRTRREACTCPYCKDSE 613
Query: 195 -------GRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
G+++ H CH GC KVY K+SHL+AH R HTG P + TW
Sbjct: 614 GRGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCTW 660
>gi|218751903 Sp1 transcription factor isoform b [Homo sapiens]
Length = 778
Score = 60.1 bits (144), Expect = 2e-09
Identities = 46/167 (27%), Positives = 66/167 (39%), Gaps = 43/167 (25%)
Query: 111 ESSDSSEELSPTAKFTSDPIGEVLVSSGKLSS-----SVTSTPPSSPELSREPSQLWGCV 165
++S S+ L+P A S P G V V++ +LSS ++ + + + P Q
Sbjct: 487 QTSSSNTTLTPIASAASIPAGTVTVNAAQLSSMPGLQTINLSALGTSGIQVHPIQGLPLA 546
Query: 166 PGELPSPGKVRSGTSGKPGD--------KGNGDASPD----------------------- 194
P + G G GD G+ SPD
Sbjct: 547 IANAPGDHGAQLGLHGAGGDGIHDDTAGGEEGENSPDAQPQAGRRTRREACTCPYCKDSE 606
Query: 195 -------GRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
G+++ H CH GC KVY K+SHL+AH R HTG P + TW
Sbjct: 607 GRGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCTW 653
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 58.2 bits (139), Expect = 6e-09
Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 109 SSESSDSSEELS-PTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQLWGCVPG 167
S E+ +S S P P E+ +SG ++ P SS + PS PG
Sbjct: 104 SGEAPRASSGFSDPIPCSVQTPCSELAPASG---AAAVCAPESSSDAPAVPSA--PAAPG 158
Query: 168 ELPSPGKVRSGTSGKPGDKGNGDASPDGRR-----RVHRCHFNGCRKVYTKSSHLKAHQR 222
+ G G G G D +P R + H+C F GC K Y KSSHLK+HQR
Sbjct: 159 APAASGGFSGGALGA-GPAPAADQAPRRRSVTPAAKRHQCPFPGCTKAYYKSSHLKSHQR 217
Query: 223 THTGVFPGLTTW 234
THTG P W
Sbjct: 218 THTGERPFSCDW 229
>gi|7662494 Kruppel-like factor 15 [Homo sapiens]
Length = 416
Score = 58.2 bits (139), Expect = 6e-09
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 198 RVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTWP 235
++H+C F GC K+YTKSSHLKAH R HTG P TWP
Sbjct: 319 KMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWP 356
>gi|10835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]
Length = 362
Score = 56.6 bits (135), Expect = 2e-08
Identities = 33/73 (45%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 172 PGKVRSGTSGKPGDKGN-GDASPDGRRR---------VHRCHFNGCRKVYTKSSHLKAHQ 221
PG V +G G D G + +P R R H C GC K YTKSSHLKAH
Sbjct: 241 PGTVGTGLGGTAEDPGVIAETAPSKRGRRSWARKRQAAHTCAHPGCGKSYTKSSHLKAHL 300
Query: 222 RTHTGVFPGLTTW 234
RTHTG P TW
Sbjct: 301 RTHTGEKPYACTW 313
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 56.6 bits (135), Expect = 2e-08
Identities = 31/72 (43%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 166 PGELP---SPGKVRSGTSGKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQR 222
PG P SP S S + G A+P + HRC F C K Y KSSHLK+H R
Sbjct: 91 PGAAPGGASPASSSSAASSPSSGRAPG-AAPSAAAKSHRCPFPDCAKAYYKSSHLKSHLR 149
Query: 223 THTGVFPGLTTW 234
THTG P W
Sbjct: 150 THTGERPFACDW 161
Score = 32.0 bits (71), Expect = 0.48
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 191 ASPDGRRRVHRCHFNG-------CRKVYTKSSHLKAHQRTHTGVFPGLTTWP 235
A D R HR H C K +T+S HL H R H G P L P
Sbjct: 169 ARSDELARHHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPDLLRRP 220
>gi|67010025 Sp4 transcription factor [Homo sapiens]
Length = 784
Score = 55.5 bits (132), Expect = 4e-08
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 186 KGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
+G G P G+++ H CH GC KVY K+SHL+AH R HTG P + W
Sbjct: 634 EGRGSNEP-GKKKQHICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNW 681
Score = 28.1 bits (61), Expect = 6.9
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 101 TNSLNSDVSSESSDSSEELSPTAKFTSDPIGEVLVSSGKLSSSVTSTPPSSPELSREPSQ 160
TN+ S + S SS T TS + LVSS + ST SS E + E SQ
Sbjct: 305 TNTTTSASTMPESPSSSTTCTTTASTSLTSSDTLVSSAD-TGQYASTSASSSERTIEESQ 363
Query: 161 LWGCVPGELPSPGKVRSGTSGKPGDKGN 188
E S +++ D+ N
Sbjct: 364 TPAATESEAQSSSQLQPNGMQNAQDQSN 391
>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
Length = 479
Score = 55.1 bits (131), Expect = 5e-08
Identities = 35/81 (43%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 158 PSQLWGCVPG----ELPSPGKVRSGTSGKPGDKGNGDASPDGRRRVHRCHFNGCRKVYTK 213
P Q+ VP EL PG S +P K + P R H C + GC K YTK
Sbjct: 353 PDQMQPQVPPLHYQELMPPG---SCMPEEPKPKRGRRSWPRKRTATHTCDYAGCGKTYTK 409
Query: 214 SSHLKAHQRTHTGVFPGLTTW 234
SSHLKAH RTHTG P W
Sbjct: 410 SSHLKAHLRTHTGEKPYHCDW 430
>gi|4507503 Kruppel-like factor 11 [Homo sapiens]
Length = 512
Score = 54.3 bits (129), Expect = 9e-08
Identities = 25/39 (64%), Positives = 27/39 (69%)
Query: 196 RRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
RRR + C F GCRK Y KSSHLKAH RTHTG P +W
Sbjct: 390 RRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSW 428
>gi|51468067 Sp5 transcription factor [Homo sapiens]
Length = 398
Score = 53.9 bits (128), Expect = 1e-07
Identities = 25/48 (52%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 187 GNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
G +A P G+++ H CH GC KVY K+SHLKAH R HTG P + W
Sbjct: 284 GAPEAEP-GKKKQHVCHVPGCGKVYGKTSHLKAHLRWHTGERPFVCNW 330
>gi|22902136 osterix [Homo sapiens]
Length = 431
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 167 GELPSPGKVRSGTSGKPGDKGNGDASPD-----------------GRRRVHRCHFNGCRK 209
G P +G SG G G G +S D ++ +H CH GC K
Sbjct: 244 GGAKPPRGASTGGSGGYGGSGAGRSSCDCPNCQELERLGAAAAGLRKKPIHSCHIPGCGK 303
Query: 210 VYTKSSHLKAHQRTHTGVFPGLTTW 234
VY K+SHLKAH R HTG P + W
Sbjct: 304 VYGKASHLKAHLRWHTGERPFVCNW 328
Score = 31.6 bits (70), Expect = 0.63
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 207 CRKVYTKSSHLKAHQRTHTGVFPG 230
C K +T+S HL HQRTH PG
Sbjct: 359 CSKRFTRSDHLSKHQRTHGEPGPG 382
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/42 (57%), Positives = 25/42 (59%)
Query: 193 PDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
P R H C + GC K YTKSSHLKAH RTHTG P W
Sbjct: 265 PRKRTATHTCSYAGCGKTYTKSSHLKAHLRTHTGEKPYHCNW 306
>gi|223646113 Sp9 transcription factor homolog [Homo sapiens]
Length = 484
Score = 53.1 bits (126), Expect = 2e-07
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 81 ISSSPPEDTLISPSFCYNLETNSL------NSDVSSESSDSSEELSPTAKFTSDPIGEVL 134
+ S P+ +L S YN + +SL ++ + S ++ +S LS + + + +
Sbjct: 204 LHSGAPQASLHSQLGTYNPDFSSLTHSAFSSTGLGSSAAAASHLLSTSQHLLAQDGFKPV 263
Query: 135 VSSGKLSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSG--TSGKPGDKGNGDAS 192
+ S SS+ + +S +S + G G + SG T P +
Sbjct: 264 LPSYSDSSAAVAAAAASAMISGAAAAAAG---GSSARSARRYSGRATCDCPNCQEAERLG 320
Query: 193 PDG----RRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
P G R+ +H CH GC KVY K+SHLKAH R HTG P + W
Sbjct: 321 PAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNW 366
>gi|62865633 Sp3 transcription factor isoform 2 [Homo sapiens]
Length = 713
Score = 52.8 bits (125), Expect = 3e-07
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 186 KGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
+G G + G+++ H CH GC KVY K+SHL+AH R H+G P + W
Sbjct: 539 EGGGRGTNLGKKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNW 587
>gi|38373693 Sp3 transcription factor isoform 1 [Homo sapiens]
Length = 781
Score = 52.8 bits (125), Expect = 3e-07
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 186 KGNGDASPDGRRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
+G G + G+++ H CH GC KVY K+SHL+AH R H+G P + W
Sbjct: 607 EGGGRGTNLGKKKQHICHIPGCGKVYGKTSHLRAHLRWHSGERPFVCNW 655
>gi|42263098 Sp6 transcription factor [Homo sapiens]
Length = 376
Score = 52.0 bits (123), Expect = 4e-07
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 193 PDG--RRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
PDG ++ +H CH GC K Y K+SHLKAH R H+G P + W
Sbjct: 245 PDGGKKKHLHNCHIPGCGKAYAKTSHLKAHLRWHSGDRPFVCNW 288
Score = 27.7 bits (60), Expect = 9.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 207 CRKVYTKSSHLKAHQRTHTG 226
C +V+ +S HL H +TH G
Sbjct: 319 CSRVFMRSDHLAKHMKTHEG 338
>gi|104294874 zinc finger protein 393 [Homo sapiens]
Length = 389
Score = 50.8 bits (120), Expect = 1e-06
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 20/155 (12%)
Query: 81 ISSSPPEDTLISPSFCYNLETNSLNSDVSSESSDSSEELS-PTAKFTSDPIGEVLVSSGK 139
+S+ P ++TL+ P+ L S + +L P A+ S L+ G
Sbjct: 182 LSTVPSDETLLGPTVPSTEAQAVLPSMAQMLPPQDAHDLGMPPAESQS------LLVLGS 235
Query: 140 LSSSVTSTPPSSPELSREPSQLWGCVPGELPSPGKVRSGTSGKPGDKGNGDASPDGRRRV 199
S V+ P S E P Q PG P + S G +G+ +A P
Sbjct: 236 QDSLVSQ--PDSQEGPFLPEQ-----PGPAPQTVEKNSRPQEGTGRRGSSEARP------ 282
Query: 200 HRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
+ C++ C K YTK SHL +HQR HTG P W
Sbjct: 283 YCCNYENCGKAYTKRSHLVSHQRKHTGERPYSCNW 317
Score = 29.6 bits (65), Expect = 2.4
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 196 RRRVHRCHFNGCRKVYTKSSHLKAHQRTH 224
R R ++C + C + + +S HLK HQ+TH
Sbjct: 339 RYRPYKC--DQCSREFMRSDHLKQHQKTH 365
>gi|73760403 Kruppel-like factor 10 isoform b [Homo sapiens]
Length = 469
Score = 49.3 bits (116), Expect = 3e-06
Identities = 23/39 (58%), Positives = 24/39 (61%)
Query: 196 RRRVHRCHFNGCRKVYTKSSHLKAHQRTHTGVFPGLTTW 234
R R H C GC K Y KSSHLKAH RTHTG P +W
Sbjct: 354 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW 392
Score = 32.7 bits (73), Expect = 0.28
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 202 CHFNGCRKVYTKSSHLKAHQRTHTG 226
C + GC + + +S L H+RTHTG
Sbjct: 390 CSWKGCERRFARSDELSRHRRTHTG 414
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,990,486
Number of Sequences: 37866
Number of extensions: 584782
Number of successful extensions: 10696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 3332
Number of HSP's gapped (non-prelim): 7608
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.