Guide to the Human Genome
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Name: KLF6 Sequence: fasta or formatted (283aa) NCBI GI: 37655157
Description:

Kruppel-like factor 6 isoform A

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [241aa] Kruppel-like factor 6 isoform B
alt prot [237aa] Kruppel-like factor 6 isoform C
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          9           1
 C cysteine            4.2         12           1
 D aspartate           4.6         13           1
 E glutamate           9.2         26           2
 F phenylalanine       3.5         10           1
 G glycine             5.7         16           1
 H histidine           4.2         12           1
 I isoleucine          2.8          8           2
 K lysine              6.4         18           2
 L leucine             8.5         24           1
 M methionine          1.1          3           1
 N asparagine          1.8          5           1
 P proline             6.7         19           2
 Q glutamine           2.8          8           2
 R arginine            6.4         18           3
 S serine             15.5         44           3
 T threonine           5.3         15           1
 V valine              3.9         11           1
 W tryptophan          1.8          5           1
 Y tyrosine            2.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 6 isoform A 
KLF6                  0.801   Kruppel-like factor 6 isoform B 
KLF6                  0.776   Kruppel-like factor 6 isoform C 
KLF7                  0.451   Kruppel-like factor 7 (ubiquitous) 
KLF12                 0.268   Kruppel-like factor 12 
KLF3                  0.259   Kruppel-like factor 3 (basic) 
KLF5                  0.252   Kruppel-like factor 5 
KLF8                  0.243   Kruppel-like factor 8 isoform 1 
KLF4                  0.234   Kruppel-like factor 4 (gut) 
KLF1                  0.234   Kruppel-like factor 1 (erythroid) 
KLF2                  0.231   Kruppel-like factor 
KLF13                 0.202   Kruppel-like factor 13 
KLF11                 0.190   Kruppel-like factor 11 
KLF15                 0.188   Kruppel-like factor 15 
KLF16                 0.187   BTE-binding protein 4 
KLF9                  0.187   Kruppel-like factor 9 
KLF10                 0.187   Kruppel-like factor 10 isoform b 
KLF10                 0.187   Kruppel-like factor 10 isoform a 
KLF14                 0.181   Kruppel-like factor 14 
KLF17                 0.176   zinc finger protein 393 
SP8                   0.174   Sp8 transcription factor isoform 1 
SP8                   0.174   Sp8 transcription factor isoform 2 
SP1                   0.173   Sp1 transcription factor isoform a 
SP1                   0.173   Sp1 transcription factor isoform b 
SP4                   0.165   Sp4 transcription factor 
SP6                   0.165   Sp6 transcription factor 
SP3                   0.162   Sp3 transcription factor isoform 2 
SP3                   0.162   Sp3 transcription factor isoform 1 
SP9                   0.162   Sp9 transcription factor homolog 
SP5                   0.162   Sp5 transcription factor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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