Guide to the Human Genome
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Name: KLF8 Sequence: fasta or formatted (359aa) NCBI GI: 89111943
Description:

Kruppel-like factor 8 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [257aa] Kruppel-like factor 8 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         19           2
 C cysteine            1.7          6           1
 D aspartate           5.3         19           1
 E glutamate           5.0         18           2
 F phenylalanine       2.5          9           1
 G glycine             5.3         19           2
 H histidine           3.3         12           1
 I isoleucine          4.7         17           1
 K lysine              5.3         19           1
 L leucine             8.6         31           2
 M methionine          3.6         13           1
 N asparagine          3.3         12           2
 P proline             8.9         32           2
 Q glutamine           5.3         19           2
 R arginine            5.0         18           3
 S serine             12.3         44           2
 T threonine           7.0         25           2
 V valine              5.8         21           3
 W tryptophan          0.6          2           1
 Y tyrosine            1.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kruppel-like factor 8 isoform 1 
KLF8                  0.673   Kruppel-like factor 8 isoform 2 
KLF12                 0.381   Kruppel-like factor 12 
KLF3                  0.246   Kruppel-like factor 3 (basic) 
KLF5                  0.206   Kruppel-like factor 5 
KLF6                  0.198   Kruppel-like factor 6 isoform A 
KLF7                  0.196   Kruppel-like factor 7 (ubiquitous) 
KLF2                  0.192   Kruppel-like factor 
KLF4                  0.192   Kruppel-like factor 4 (gut) 
KLF1                  0.183   Kruppel-like factor 1 (erythroid) 
KLF11                 0.162   Kruppel-like factor 11 
KLF15                 0.158   Kruppel-like factor 15 
KLF10                 0.156   Kruppel-like factor 10 isoform b 
KLF10                 0.156   Kruppel-like factor 10 isoform a 
KLF9                  0.153   Kruppel-like factor 9 
KLF13                 0.146   Kruppel-like factor 13 
KLF14                 0.142   Kruppel-like factor 14 
SP1                   0.142   Sp1 transcription factor isoform a 
SP1                   0.142   Sp1 transcription factor isoform b 
KLF17                 0.142   zinc finger protein 393 
SP4                   0.139   Sp4 transcription factor 
KLF16                 0.136   BTE-binding protein 4 
SP9                   0.135   Sp9 transcription factor homolog 
SP8                   0.133   Sp8 transcription factor isoform 1 
SP8                   0.133   Sp8 transcription factor isoform 2 
SP7                   0.129   osterix 
WT1                   0.128   Wilms tumor 1 isoform D 
WT1                   0.128   Wilms tumor 1 isoform C 
WT1                   0.128   Wilms tumor 1 isoform B 
WT1                   0.128   Wilms tumor 1 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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