Guide to the Human Genome
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Name: SP9 Sequence: fasta or formatted (484aa) NCBI GI: 223646113
Description:

Sp9 transcription factor homolog

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            17.4         84          16
 C cysteine            2.5         12           1
 D aspartate           3.1         15           1
 E glutamate           3.1         15           2
 F phenylalanine       3.5         17           1
 G glycine            11.6         56           5
 H histidine           4.3         21           1
 I isoleucine          1.4          7           1
 K lysine              3.7         18           2
 L leucine             7.4         36           2
 M methionine          1.0          5           1
 N asparagine          2.9         14           1
 P proline             4.8         23           1
 Q glutamine           2.1         10           1
 R arginine            4.5         22           2
 S serine             15.3         74           4
 T threonine           5.6         27           2
 V valine              2.7         13           1
 W tryptophan          1.4          7           2
 Y tyrosine            1.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Sp9 transcription factor homolog 
SP8                   0.531   Sp8 transcription factor isoform 1 
SP8                   0.499   Sp8 transcription factor isoform 2 
SP7                   0.302   osterix 
SP6                   0.221   Sp6 transcription factor 
SP5                   0.185   Sp5 transcription factor 
SP3                   0.181   Sp3 transcription factor isoform 2 
SP3                   0.181   Sp3 transcription factor isoform 1 
SP4                   0.178   Sp4 transcription factor 
SP1                   0.170   Sp1 transcription factor isoform a 
SP1                   0.170   Sp1 transcription factor isoform b 
SP2                   0.151   Sp2 transcription factor 
KLF13                 0.139   Kruppel-like factor 13 
KLF16                 0.127   BTE-binding protein 4 
KLF14                 0.123   Kruppel-like factor 14 
KLF9                  0.118   Kruppel-like factor 9 
KLF10                 0.117   Kruppel-like factor 10 isoform b 
KLF10                 0.117   Kruppel-like factor 10 isoform a 
KLF15                 0.115   Kruppel-like factor 15 
KLF11                 0.114   Kruppel-like factor 11 
KLF7                  0.113   Kruppel-like factor 7 (ubiquitous) 
KLF2                  0.105   Kruppel-like factor 
KLF5                  0.104   Kruppel-like factor 5 
KLF1                  0.103   Kruppel-like factor 1 (erythroid) 
KLF8                  0.099   Kruppel-like factor 8 isoform 1 
KLF4                  0.098   Kruppel-like factor 4 (gut) 
KLF6                  0.097   Kruppel-like factor 6 isoform A 
ZIC2                  0.096   zinc finger protein of the cerebellum 2 
KLF3                  0.095   Kruppel-like factor 3 (basic) 
KLF17                 0.094   zinc finger protein 393 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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