Guide to the Human Genome
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Name: SP7 Sequence: fasta or formatted (431aa) NCBI GI: 22902136
Description:

osterix

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         31           4
 C cysteine            2.6         11           1
 D aspartate           3.2         14           1
 E glutamate           4.4         19           3
 F phenylalanine       2.3         10           1
 G glycine            13.9         60           3
 H histidine           4.2         18           1
 I isoleucine          1.2          5           1
 K lysine              5.1         22           2
 L leucine             8.4         36           2
 M methionine          1.2          5           1
 N asparagine          2.3         10           1
 P proline            13.0         56           3
 Q glutamine           3.2         14           1
 R arginine            3.9         17           1
 S serine             10.7         46           3
 T threonine           6.5         28           2
 V valine              2.3         10           1
 W tryptophan          1.4          6           2
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   osterix 
SP9                   0.319   Sp9 transcription factor homolog 
SP8                   0.300   Sp8 transcription factor isoform 1 
SP8                   0.284   Sp8 transcription factor isoform 2 
SP6                   0.234   Sp6 transcription factor 
SP5                   0.180   Sp5 transcription factor 
SP1                   0.172   Sp1 transcription factor isoform a 
SP1                   0.172   Sp1 transcription factor isoform b 
SP4                   0.171   Sp4 transcription factor 
SP3                   0.169   Sp3 transcription factor isoform 2 
SP3                   0.169   Sp3 transcription factor isoform 1 
SP2                   0.145   Sp2 transcription factor 
KLF16                 0.139   BTE-binding protein 4 
KLF13                 0.138   Kruppel-like factor 13 
KLF14                 0.128   Kruppel-like factor 14 
KLF9                  0.120   Kruppel-like factor 9 
KLF2                  0.113   Kruppel-like factor 
KLF10                 0.113   Kruppel-like factor 10 isoform b 
KLF10                 0.113   Kruppel-like factor 10 isoform a 
KLF15                 0.112   Kruppel-like factor 15 
KLF1                  0.110   Kruppel-like factor 1 (erythroid) 
KLF11                 0.110   Kruppel-like factor 11 
KLF17                 0.103   zinc finger protein 393 
KLF5                  0.103   Kruppel-like factor 5 
KLF8                  0.100   Kruppel-like factor 8 isoform 1 
KLF7                  0.100   Kruppel-like factor 7 (ubiquitous) 
KLF12                 0.098   Kruppel-like factor 12 
KLF6                  0.097   Kruppel-like factor 6 isoform A 
KLF4                  0.097   Kruppel-like factor 4 (gut) 
KLF3                  0.094   Kruppel-like factor 3 (basic) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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