Search of human proteins with 23510350

Search of human proteins with 23510350

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23510350 sorting nexin 21 isoform b [Homo sapiens]
         (199 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23510350 sorting nexin 21 isoform b [Homo sapiens]                 407   e-114
gi|15553099 sorting nexin 21 isoform a [Homo sapiens]                 400   e-112
gi|111118961 sorting nexin 21 isoform d [Homo sapiens]                303   6e-83
gi|111118959 sorting nexin 21 isoform c [Homo sapiens]                297   5e-81
gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens]                  69   3e-12
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]    45   3e-05
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]         42   3e-04
gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]    41   6e-04
gi|148728188 integrin, alpha E precursor [Homo sapiens]                40   0.001
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]           40   0.002
gi|55956788 nucleolin [Homo sapiens]                                   39   0.002
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]               39   0.003
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]           39   0.003
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]    39   0.003
gi|25777744 hypothetical protein LOC267004 [Homo sapiens]              39   0.004
gi|115529449 upstream binding transcription factor, RNA polymera...    39   0.004
gi|115529451 upstream binding transcription factor, RNA polymera...    39   0.004
gi|7657671 upstream binding transcription factor, RNA polymerase...    39   0.004
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             39   0.004
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]       38   0.005
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]       38   0.005
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]        38   0.005
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]                  37   0.008
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]                37   0.008
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         37   0.008
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]           37   0.011
gi|17975763 myelin transcription factor 1 [Homo sapiens]               37   0.011
gi|155030232 proline, glutamic acid and leucine rich protein 1 [...    37   0.011
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              37   0.014
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    36   0.019

>gi|23510350 sorting nexin 21 isoform b [Homo sapiens]
          Length = 199

 Score =  407 bits (1045), Expect = e-114
 Identities = 199/199 (100%), Positives = 199/199 (100%)

Query: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60
           MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT
Sbjct: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60

Query: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120
           LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK
Sbjct: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120

Query: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR 180
           KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR
Sbjct: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR 180

Query: 181 NLQRQFRGPMAAISFPQSH 199
           NLQRQFRGPMAAISFPQSH
Sbjct: 181 NLQRQFRGPMAAISFPQSH 199


>gi|15553099 sorting nexin 21 isoform a [Homo sapiens]
          Length = 373

 Score =  400 bits (1029), Expect = e-112
 Identities = 196/197 (99%), Positives = 197/197 (100%)

Query: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60
           MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT
Sbjct: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60

Query: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120
           LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK
Sbjct: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120

Query: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR 180
           KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR
Sbjct: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHR 180

Query: 181 NLQRQFRGPMAAISFPQ 197
           NLQRQFRGPMAAISFP+
Sbjct: 181 NLQRQFRGPMAAISFPR 197


>gi|111118961 sorting nexin 21 isoform d [Homo sapiens]
          Length = 158

 Score =  303 bits (776), Expect = 6e-83
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60
           MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT
Sbjct: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60

Query: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120
           LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK
Sbjct: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120

Query: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYV 149
           KSRNTLAPQRLLFEVTSANVVKDPPSKYV
Sbjct: 121 KSRNTLAPQRLLFEVTSANVVKDPPSKYV 149


>gi|111118959 sorting nexin 21 isoform c [Homo sapiens]
          Length = 152

 Score =  297 bits (760), Expect = 5e-81
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60
           MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT
Sbjct: 1   MHRGTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGT 60

Query: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120
           LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK
Sbjct: 61  LSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK 120

Query: 121 KSRNTLAPQRLLFEVTSANVVKDPPS 146
           KSRNTLAPQRLLFEVTSANVVKDPPS
Sbjct: 121 KSRNTLAPQRLLFEVTSANVVKDPPS 146


>gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens]
          Length = 316

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 100 PPPDGQW--------GSQLLARQLQDFWKKSRNTLAPQRLLFEVTSANVVKDPPSKYVLY 151
           P PDG           S +  R+LQ +W+  +      +LLFE+ SA + +   SK+V+Y
Sbjct: 37  PGPDGHLDTHSGLSSNSSMTTRELQQYWQNQKCRWKHVKLLFEIASARIEERKVSKFVVY 96

Query: 152 TLAVIGPGPPDCQPAQISRRYSDFERLHRNLQRQFRGPMAAISFPQSH 199
            + VI  G  D   A + RRYSDF +L + L + FR  +  + FP+ H
Sbjct: 97  QIIVIQTGSFDNNKAVLERRYSDFAKLQKALLKTFREEIEDVEFPRKH 144


>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
          Length = 511

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 12  SRLLHRLRHALAGDGPGE-AAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDE 70
           ++L HRLRH LA   PG   AA    ++ P   +L        +       S ++A DD 
Sbjct: 147 AQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEGPDADPSLSAAPDDR 206

Query: 71  DDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQ 105
            DED+++ +         D T GED E   P +GQ
Sbjct: 207 GDEDDEESD---------DETDGEDGEGGGPGEGQ 232


>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
          Length = 224

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 34  PEAEQFPESSELEDDDAEGL---SSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDG 90
           P   +F   SELE+++ E     SS  S + S +  +DDE+DE+E++EE   +     + 
Sbjct: 6   PNMAEFDTISELEEEEEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEE-----EE 60

Query: 91  TSGEDAERSPPPDGQWGSQLLARQLQD 117
              E+ E +PPP      + L R   D
Sbjct: 61  EEEEEEEEAPPPPRVVSEEHLRRYAPD 87


>gi|75677335 digestive-organ expansion factor homolog [Homo sapiens]
          Length = 756

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 32  ASPEAEQFPESSELEDDDAEGLSS--------RLSGTLSFTSAEDDEDDEDEDDEEAGPD 83
           A P+  Q  ESS+  D +++  S         RL  TL   S E++ED+E+E++E++  D
Sbjct: 42  AKPQICQLSESSDSSDSESDSESEPQQVSGYHRLLATLKNVSEEEEEDEEEEEEEDSIVD 101

Query: 84  QLPLGDGTSGED 95
              + D   G D
Sbjct: 102 DAEMNDEDGGSD 113


>gi|148728188 integrin, alpha E precursor [Homo sapiens]
          Length = 1179

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 7/75 (9%)

Query: 47  DDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQW 106
           +DD    ++R    L     ED E++EDE++EEAG +   + DG+   D     PPD Q 
Sbjct: 168 EDDVN--TARQRRALEKEEEEDKEEEEDEEEEEAGTEIAIILDGSGSID-----PPDFQR 220

Query: 107 GSQLLARQLQDFWKK 121
               ++  +++F++K
Sbjct: 221 AKDFISNMMRNFYEK 235


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 12/66 (18%)

Query: 19  RHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDE 78
           +H  A +G  +AA S + ++  E+ E E+D+ E               E+DED+ED++DE
Sbjct: 303 KHDAANNGVVKAAKSKKKKEEEENEEDEEDEEE------------EKDEEDEDEEDDEDE 350

Query: 79  EAGPDQ 84
           E G D+
Sbjct: 351 EDGDDE 356



 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 67  EDDEDDEDEDDEEAGPDQLPLGDGTSGEDAE 97
           E+DE+DE+E+ +E   D+    D   G+D +
Sbjct: 327 EEDEEDEEEEKDEEDEDEEDDEDEEDGDDEQ 357


>gi|55956788 nucleolin [Homo sapiens]
          Length = 710

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGE 94
           ++E+  E  E ED+D + +        +   A +DEDDED++D+E   D     +  S E
Sbjct: 152 DSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDD---EEDDSEE 208

Query: 95  DAERSPPPDGQWGSQLL 111
           +A  + P  G+  ++++
Sbjct: 209 EAMETTPAKGKKAAKVV 225



 Score = 35.0 bits (79), Expect = 0.042
 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 15/53 (28%)

Query: 27  PGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEE 79
           P +A    E E   E  E EDDD +               EDDEDD+DEDDEE
Sbjct: 226 PVKAKNVAEDEDEEEDDEDEDDDDD---------------EDDEDDDDEDDEE 263



 Score = 30.8 bits (68), Expect = 0.79
 Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 24/95 (25%)

Query: 30  AAASPEAE----QFPESSELEDDDAEGLSS--------------------RLSGTLSFTS 65
           AAA+P +E    +  E  E +DDD E  S                     +         
Sbjct: 178 AAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDED 237

Query: 66  AEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSP 100
            E+D++DED+DD+E   D     D    E+ E  P
Sbjct: 238 EEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEP 272


>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
          Length = 533

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 34  PEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSG 93
           P+  +FPE +E  ++D  G SS       + S  DD+D ED+ D E+  ++    +    
Sbjct: 86  PQVPRFPEETESHEEDNGGWSSFEED--DYESPNDDQDGEDDGDYESPNEE---EEAPVE 140

Query: 94  EDAERSPPP 102
           +DA+  PPP
Sbjct: 141 DDADYEPPP 149


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 13/66 (19%)

Query: 19  RHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDE 78
           +H  A +G  +AA S + ++  E+ E E+D+ E               ++DED+ED++DE
Sbjct: 303 KHDAANNGVVKAAKSKKKKEEEENEEDEEDEEE-------------EKDEDEDEEDDEDE 349

Query: 79  EAGPDQ 84
           E G D+
Sbjct: 350 EDGDDE 355


>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
          Length = 1759

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 23   AGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGP 82
            A  GP E AA+  A     S E E+++ E         L    AEDDED++D++D++   
Sbjct: 1655 AAPGPREGAAAAAAAAGESSQEDEEEELE---------LPEEEAEDDEDEDDDEDDDDED 1705

Query: 83   DQLPLGDGTSGEDAERSPP 101
            D     D     D+E S P
Sbjct: 1706 DDEDDDDEDLRTDSEESLP 1724


>gi|25777744 hypothetical protein LOC267004 [Homo sapiens]
          Length = 593

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 23/127 (18%)

Query: 15  LHRLRHALAGDGPGEAAA----SPEAEQFPESSELEDDDAEGLSSRLSGTLSFTS----- 65
           LH +   L  D   EA+A     PE    P S E   D+  G  + L G+L  T+     
Sbjct: 7   LHEITDLLETDDSIEASAIVIQPPENATAPVSDEESGDEEGGTINNLPGSLLHTAAYLIQ 66

Query: 66  ----AEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWKK 121
               AE D DD     ++  PD++P     S    ++ PP   +  +++L +     WKK
Sbjct: 67  DGSDAESDSDDPSYAPKDDSPDEVP-----STFTVQQPPPSRRRKMTKILCK-----WKK 116

Query: 122 SRNTLAP 128
           +  T+ P
Sbjct: 117 ADLTVQP 123


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 8/53 (15%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDD--------EDDEDEDDEE 79
           E E   +  E E+DD  G SS   G  S +S+ED+        EDDEDEDD+E
Sbjct: 646 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE 698



 Score = 33.9 bits (76), Expect = 0.094
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 54  SSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGT--SGEDAERSPPPDGQWGSQ 109
           SSR +      S EDDE+DED++DE+   +    GD +   G+ +E S   + + G +
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 8/53 (15%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDD--------EDDEDEDDEE 79
           E E   +  E E+DD  G SS   G  S +S+ED+        EDDEDEDD+E
Sbjct: 646 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE 698



 Score = 33.9 bits (76), Expect = 0.094
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 54  SSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGT--SGEDAERSPPPDGQWGSQ 109
           SSR +      S EDDE+DED++DE+   +    GD +   G+ +E S   + + G +
Sbjct: 629 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 686


>gi|7657671 upstream binding transcription factor, RNA polymerase I
           isoform a [Homo sapiens]
          Length = 764

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 8/53 (15%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDD--------EDDEDEDDEE 79
           E E   +  E E+DD  G SS   G  S +S+ED+        EDDEDEDD+E
Sbjct: 683 EDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE 735



 Score = 33.9 bits (76), Expect = 0.094
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 54  SSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGT--SGEDAERSPPPDGQWGSQ 109
           SSR +      S EDDE+DED++DE+   +    GD +   G+ +E S   + + G +
Sbjct: 666 SSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDE 723


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 24  GDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPD 83
           G  P   ++  E+  + + +  + D    LSS  +   S    E+ E++E+E++EE G  
Sbjct: 373 GSFPESCSSDSESSSYSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEEEEEEEEEEGGSG 432

Query: 84  QLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWK----KSRNTLAPQRLLFEVTSAN 139
                +  S E+ + S   D   GS  ++ Q   F +    K  +  A    L+ + SA 
Sbjct: 433 ASDSSE-VSSEEEDSSTESDSSSGSSQVSVQSIRFRRTSFCKPPSVQAQANFLYHLASAA 491

Query: 140 VVKDP 144
               P
Sbjct: 492 AATKP 496


>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 27  PGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLP 86
           P +     E E++ E  E EDDD      R  G +    A+ D++ EDED  E G + + 
Sbjct: 42  PEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFI-LDEADVDDEYEDEDQWEDGAEDIL 100

Query: 87  LGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWKKSR 123
             +     + +     + + G    AR+LQ+ W+  R
Sbjct: 101 EKEEIEASNIDNVVLDEDRSG----ARRLQNLWRDQR 133


>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 27  PGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLP 86
           P +     E E++ E  E EDDD      R  G +    A+ D++ EDED  E G + + 
Sbjct: 42  PEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFI-LDEADVDDEYEDEDQWEDGAEDIL 100

Query: 87  LGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWKKSR 123
             +     + +     + + G    AR+LQ+ W+  R
Sbjct: 101 EKEEIEASNIDNVVLDEDRSG----ARRLQNLWRDQR 133


>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 27  PGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLP 86
           P +     E E++ E  E EDDD      R  G +    A+ D++ EDED  E G + + 
Sbjct: 42  PEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFI-LDEADVDDEYEDEDQWEDGAEDIL 100

Query: 87  LGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWKKSR 123
             +     + +     + + G    AR+LQ+ W+  R
Sbjct: 101 EKEEIEASNIDNVVLDEDRSG----ARRLQNLWRDQR 133


>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
          Length = 814

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 19  RHALAG-DGPGEAAASPEAEQFP-ESSELEDDDAEGLSSRLSG-TLSFTSAEDDEDDEDE 75
           R ALAG  G G A A P     P ++ E E +D  G SS   G + S  S ++  DDED+
Sbjct: 503 RRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDD 562

Query: 76  DDEEA 80
           D++EA
Sbjct: 563 DEDEA 567


>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
          Length = 411

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 19  RHALAG-DGPGEAAASPEAEQFP-ESSELEDDDAEGLSSRLSG-TLSFTSAEDDEDDEDE 75
           R ALAG  G G A A P     P ++ E E +D  G SS   G + S  S ++  DDED+
Sbjct: 100 RRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDD 159

Query: 76  DDEEA 80
           D++EA
Sbjct: 160 DEDEA 164


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 34/151 (22%)

Query: 25  DGPGEAAASPEAEQFPESSELED-----DDAEGLSSRLSGTLSFTSAEDDED-------- 71
           +GP EA   P+ +   +S  +ED     +D        SG+ +   +E +E         
Sbjct: 480 EGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQ 539

Query: 72  -DEDEDDEEAGPDQLPLGDGTSGE-DAERSPPPDGQWGSQLLARQLQDFWKKSRNTLAPQ 129
            DE+E+D++ G + L   D    E DA   PP  G                    TL P+
Sbjct: 540 ADEEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGP------------------TTLGPK 581

Query: 130 RLLFEVTSANVVKDPPSKYVLYTLAVIGPGP 160
           + + ++ +A      P  Y L T  V  P P
Sbjct: 582 KEITDIAAA-AESLQPKGYTLATTQVKTPIP 611



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 19/88 (21%)

Query: 10  MASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDD 69
           ++  L   L  + AG  P   ++S  +   P +S L+D+D +                  
Sbjct: 247 LSQSLNQPLTSSKAGSSPCLGSSSAASSPPPPASRLDDEDGDF---------------QP 291

Query: 70  EDDEDEDDEEAGPDQLPLGDGTSGEDAE 97
           ++DE+EDDEE     + + +   G DAE
Sbjct: 292 QEDEEEDDEET----IEVEEQQEGNDAE 315


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 11/66 (16%)

Query: 19  RHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDE 78
           +H  A +G  +AA S + ++  E+ E E+D+ E               ED+++++DED+E
Sbjct: 303 KHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDE-----------EDEDEEDDEDEE 351

Query: 79  EAGPDQ 84
           E G D+
Sbjct: 352 EDGDDE 357


>gi|17975763 myelin transcription factor 1 [Homo sapiens]
          Length = 1121

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGE 94
           E E+  E  E ED++ E               E++E++E+E++EEA PD +   + TS  
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVI-FQEDTSHT 320

Query: 95  DAERSP 100
            A+++P
Sbjct: 321 SAQKAP 326



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 12/33 (36%), Positives = 22/33 (66%)

Query: 47  DDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEE 79
           +D A   SS+  G LS    +++E++E+E++EE
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEE 273


>gi|155030232 proline, glutamic acid and leucine rich protein 1
           [Homo sapiens]
          Length = 1130

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 35  EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGE 94
           + E++ E  E E+++ E       G L     E++E++EDE++EE   +   L  GT+G 
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGEL-----EEEEEEEDEEEEEELEEVEDLEFGTAGG 970

Query: 95  DAERSPPP 102
           + E   PP
Sbjct: 971 EVEEGAPP 978


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)

Query: 23   AGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDD---EE 79
            A +  GEA    E  + PE+ E    + EG+ +          AE +   E E +   E+
Sbjct: 2198 APEAEGEAQPELEGVEAPEAEEEAQPEPEGVET--------PEAEGEAQPESEGETQGEK 2249

Query: 80   AGPDQLPLGDGTSGEDAERSPP 101
             G  Q+ LGDG S E +E S P
Sbjct: 2250 KGSPQVSLGDGQSEEASESSSP 2271



 Score = 34.7 bits (78), Expect = 0.055
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 31   AASPEAEQFPESSELEDDDAEGLSSRLSG-TLSFTSAEDDEDDEDEDDEEAGPDQLPLGD 89
            A   E E  PES  +E  +AEG + +  G     T  E   + E  +  EA  +  P  +
Sbjct: 2087 AQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESE 2146

Query: 90   GTSGEDAERSPPPDGQ 105
            G   +DAE    P+ +
Sbjct: 2147 GVEAQDAEGEAQPESE 2162



 Score = 34.3 bits (77), Expect = 0.072
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 25   DGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDE--EAGP 82
            +  G  A   E E  PES  +E  DAEG +   S  +    AE++   E E  E  EA  
Sbjct: 2128 ESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEG 2187

Query: 83   DQLPLGDGTSGEDAERSPPPD 103
            +  P  +G    +AE    P+
Sbjct: 2188 EAQPESEGIEAPEAEGEAQPE 2208



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 18/63 (28%), Positives = 28/63 (44%)

Query: 35   EAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGE 94
            E +  PES  +E  +AE  +    G +     E   + ED D +EA  +  P  +G    
Sbjct: 2045 EGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAP 2104

Query: 95   DAE 97
            +AE
Sbjct: 2105 EAE 2107



 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 28   GEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDE--DDEEAGPDQL 85
            G  A   E E  PES  +E  +AEG +   S  +    AE +   E E  + +EA  +  
Sbjct: 2115 GIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQ 2174

Query: 86   PLGDGTSGEDAERSPPPDGQ 105
            P  +G    +AE    P+ +
Sbjct: 2175 PELEGVEAPEAEGEAQPESE 2194



 Score = 31.6 bits (70), Expect = 0.47
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 28   GEAAASPEAEQFPESSELEDDDAEGLSSRLSG-------TLSFTSAEDDEDDEDEDDE-- 78
            G  A   E E  PES  +E  +AEG +    G        +    AE +   E ED E  
Sbjct: 1834 GIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETP 1893

Query: 79   EAGPDQLPLGDGTSGEDAERSPPPD 103
            EA  +  P  +G    +AE+   P+
Sbjct: 1894 EAEWEVQPESEGAEAPEAEKEAQPE 1918



 Score = 31.2 bits (69), Expect = 0.61
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 5/121 (4%)

Query: 31   AASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDE--EAGPDQLPLG 88
            A   E E  PES ++E  +AEG +   S  +    AE +   E E  E  EA  +  P  
Sbjct: 1860 AQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPET 1919

Query: 89   DGTSGEDAERSPPPDGQWGSQLLARQLQDFWKKSRNTLAPQRLLFEVTSANVVKDPPSKY 148
            +     + E    P+ +      A++ ++  +++     P+  + E   A     P S+ 
Sbjct: 1920 ESVEALETEGEDEPESEGAE---AQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESED 1976

Query: 149  V 149
            V
Sbjct: 1977 V 1977



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 19/103 (18%), Positives = 41/103 (39%)

Query: 34   PEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSG 93
            P++  +    +LE+       + L+      +  +DE + D +++ A  +   L + T  
Sbjct: 1239 PDSRTYESPGDLENQQQCCFPTFLNARACACATNEDEAERDSEEQRASSNLEQLAENTVQ 1298

Query: 94   EDAERSPPPDGQWGSQLLARQLQDFWKKSRNTLAPQRLLFEVT 136
            E+ +     +G  G  L    +Q    K+   L  + +  E T
Sbjct: 1299 EEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEET 1341



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 23   AGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDD-EDDEDEDDEEAG 81
            A +  GE   + E E  PES +++  +AEG +   S  +    AE + +  E  +  E  
Sbjct: 2064 AQEAEGEVQEA-EGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETE 2122

Query: 82   PDQLPLGDGTSGEDAERSPPPDGQ 105
             +  P  +G    +AE    P+ +
Sbjct: 2123 GEAQPESEGIEAPEAEGEAQPESE 2146



 Score = 27.7 bits (60), Expect = 6.7
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 12/103 (11%)

Query: 7    EGAMASRLLHRLRHALAGDGP-GEAAASPEAEQF--PESS-------ELEDDDAEGLSSR 56
            EGA A       + A     P  E   S EAE+   PES        E+E  +AEG +  
Sbjct: 1936 EGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQP 1995

Query: 57   LSGTLSFTSAEDD--EDDEDEDDEEAGPDQLPLGDGTSGEDAE 97
             S  +    AE +  E +E+   E  G +  P  +G   ++ E
Sbjct: 1996 ESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVE 2038


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 4   GTQEGAMASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSF 63
           G+++G   S      R    G  PG     P  E F + +  ED   +     +   L  
Sbjct: 80  GSEDGPPGSEEEDAAREGTPGS-PGRGREGPGEEHFEDMASDEDMKPKWEEEEMEEDLGE 138

Query: 64  TSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDA---ERSPPP 102
              E++ED EDE++EE      P G  + G  A    ++ PP
Sbjct: 139 DEEEEEEDYEDEEEEEDEEGLGPPGPASLGTTALFPRKAQPP 180


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.131    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,774,300
Number of Sequences: 37866
Number of extensions: 514017
Number of successful extensions: 7146
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 322
Number of HSP's that attempted gapping in prelim test: 4058
Number of HSP's gapped (non-prelim): 1728
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.