SNX20 26186

Name: SNX20	Sequence: fasta or formatted (316aa)		NCBI GI: 33504571
Description: sorting nexin 20 isoform 1		Referenced in: Additional Host Defense Functions ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [102aa] sorting nexin 20 isoform 3 alt prot [129aa] sorting nexin 20 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 31 3 C cysteine 2.8 9 1 D aspartate 3.5 11 1 E glutamate 8.9 28 2 F phenylalanine 3.8 12 1 G glycine 5.1 16 1 H histidine 3.2 10 1 I isoleucine 3.2 10 2 K lysine 4.1 13 1 L leucine 13.3 42 3 M methionine 1.6 5 1 N asparagine 1.6 5 2 P proline 6.0 19 1 Q glutamine 5.4 17 2 R arginine 10.4 33 3 S serine 4.1 13 2 T threonine 5.1 16 2 V valine 4.4 14 2 W tryptophan 0.6 2 1 Y tyrosine 3.2 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 20 isoform 1 SNX20 0.289 sorting nexin 20 isoform 2 SNX20 0.289 sorting nexin 20 isoform 3 SNX21 0.216 sorting nexin 21 isoform a SNX21 0.072 sorting nexin 21 isoform b SNX15 0.036 sorting nexin 15 isoform B SNX15 0.036 sorting nexin 15 isoform A SNX24 0.033 SBBI31 protein KIF16B 0.028 kinesin-like motor protein C20orf23 PXK 0.024 PX domain containing serine/threonine kinase SNX27 0.024 sorting nexin family member 27 RPS6KC1 0.021 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... SNX9 0.021 sorting nexin 9 SNX16 0.020 sorting nexin 16 isoform a SNX16 0.020 sorting nexin 16 isoform a SNX7 0.020 sorting nexin 7 isoform b SNX7 0.020 sorting nexin 7 isoform a SNX29 0.020 sorting nexin 29 RPS6KC1 0.016 ribosomal protein S6 kinase, 52kDa, polypeptide 1 i... SNX22 0.016 sorting nexin 22 SNX18 0.015 sorting nexin 18 isoform c SNX18 0.015 sorting nexin 18 isoform a SNX18 0.015 sorting nexin 18 isoform b SNX21 0.013 sorting nexin 21 isoform d SNX11 0.013 sorting nexin 11 SNX11 0.013 sorting nexin 11 SNX14 0.013 sorting nexin 14 isoform b SNX14 0.013 sorting nexin 14 isoform a SPTAN1 0.013 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... SPTAN1 0.013 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.