Guide to the Human Genome
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Search of human proteins with 23308699

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308699 transcription factor MAFB [Homo sapiens]
         (323 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23308699 transcription factor MAFB [Homo sapiens]                  674   0.0  
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   328   3e-90
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   328   3e-90
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   306   2e-83
gi|5453802 neural retina leucine zipper [Homo sapiens]                195   5e-50
gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   115   4e-26
gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolo...   110   2e-24
gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homol...   110   2e-24
gi|239048388 transcription factor MAFF isoform a [Homo sapiens]       106   3e-23
gi|239048350 transcription factor MAFF isoform a [Homo sapiens]       106   3e-23
gi|6912490 transcription factor MAFF isoform a [Homo sapiens]         106   3e-23
gi|239048390 transcription factor MAFF isoform b [Homo sapiens]       100   2e-21
gi|59938776 cAMP responsive element binding protein 5 isoform de...    64   2e-10
gi|59938774 cAMP responsive element binding protein 5 isoform be...    64   2e-10
gi|59938772 cAMP responsive element binding protein 5 isoform ga...    64   2e-10
gi|59938770 cAMP responsive element binding protein 5 isoform al...    64   2e-10
gi|32307177 forkhead box G1 [Homo sapiens]                             60   3e-09
gi|61966923 forkhead box B2 [Homo sapiens]                             59   4e-09
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]       57   3e-08
gi|21361937 proline rich 7 (synaptic) [Homo sapiens]                   53   4e-07
gi|149408126 nemo like kinase [Homo sapiens]                           52   5e-07
gi|20070107 orthodenticle homeobox 1 [Homo sapiens]                    52   7e-07
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               52   9e-07
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             52   9e-07
gi|5453774 nuclear factor, erythroid derived 2 isoform 1 [Homo s...    50   3e-06
gi|209862847 nuclear factor, erythroid derived 2 isoform 2 [Homo...    50   3e-06
gi|32698730 nuclear fragile X mental retardation protein interac...    50   3e-06
gi|18104952 T-box 1 isoform C [Homo sapiens]                           49   8e-06
gi|169636435 caudal type homeobox 2 [Homo sapiens]                     48   1e-05
gi|55770830 chromobox homolog 4 [Homo sapiens]                         47   2e-05

>gi|23308699 transcription factor MAFB [Homo sapiens]
          Length = 323

 Score =  674 bits (1739), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL 60
           MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL
Sbjct: 1   MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL 60

Query: 61  STPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQP 120
           STPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQP
Sbjct: 61  STPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQP 120

Query: 121 LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA 180
           LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA
Sbjct: 121 LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA 180

Query: 181 QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK 240
           QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK
Sbjct: 181 QQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLK 240

Query: 241 QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK 300
           QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK
Sbjct: 241 QKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEK 300

Query: 301 LANSGFREAGSTSDSPSSPEFFL 323
           LANSGFREAGSTSDSPSSPEFFL
Sbjct: 301 LANSGFREAGSTSDSPSSPEFFL 323


>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform b [Homo sapiens]
          Length = 373

 Score =  328 bits (842), Expect = 3e-90
 Identities = 200/380 (52%), Positives = 234/380 (61%), Gaps = 64/380 (16%)

Query: 1   MAAELSMG-PELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP 59
           MA+EL+M   +LPTSPLAMEYVNDFDL+KF+VKKEP+   +R    C RL   GS+SSTP
Sbjct: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP 59

Query: 60  LSTPCSSVPSSPSFSP------TEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALI- 112
           +STPCSSVP SPSFS       +EQK HLED YWM    QQ+NPEAL  +PEDAVEALI 
Sbjct: 60  MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS 119

Query: 113 GSHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAGVAHDELGPHA------------ 159
            SH   Q    FD + RGA             +  G+G   +E+GP A            
Sbjct: 120 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSG---EEMGPAAAVVSAVIAAAAA 173

Query: 160 ------HPHHHHHHQAS---PPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGS---- 206
                 H HHHHHH A     P + A   A     S  G G        +AGG G     
Sbjct: 174 QSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG 233

Query: 207 -----------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKR 243
                                   +DRFSD+QLV+MSVRELNR LRG +K+EVIRLKQKR
Sbjct: 234 GGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKR 293

Query: 244 RTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLAN 303
           RTLKNRGYAQSCR+KRVQQ+H LE+EK QL+QQV+ LKQE+SRL RERDAYK K EKL +
Sbjct: 294 RTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVS 353

Query: 304 SGFREAGSTSDSPSSPEFFL 323
           SGFRE GS+SD+PSSPEFF+
Sbjct: 354 SGFRENGSSSDNPSSPEFFM 373


>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           isoform a [Homo sapiens]
          Length = 403

 Score =  328 bits (842), Expect = 3e-90
 Identities = 200/380 (52%), Positives = 234/380 (61%), Gaps = 64/380 (16%)

Query: 1   MAAELSMG-PELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTP 59
           MA+EL+M   +LPTSPLAMEYVNDFDL+KF+VKKEP+   +R    C RL   GS+SSTP
Sbjct: 1   MASELAMSNSDLPTSPLAMEYVNDFDLMKFEVKKEPV-ETDRIISQCGRLIAGGSLSSTP 59

Query: 60  LSTPCSSVPSSPSFSP------TEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALI- 112
           +STPCSSVP SPSFS       +EQK HLED YWM    QQ+NPEAL  +PEDAVEALI 
Sbjct: 60  MSTPCSSVPPSPSFSAPSPGSGSEQKAHLEDYYWMTGYPQQLNPEALGFSPEDAVEALIS 119

Query: 113 GSHPVPQPLQSFDSF-RGAHHHHHHHHPHPHHAYPGAGVAHDELGPHA------------ 159
            SH   Q    FD + RGA             +  G+G   +E+GP A            
Sbjct: 120 NSH---QLQGGFDGYARGAQQLAAAAGAGAGASLGGSG---EEMGPAAAVVSAVIAAAAA 173

Query: 160 ------HPHHHHHHQAS---PPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGS---- 206
                 H HHHHHH A     P + A   A     S  G G        +AGG G     
Sbjct: 174 QSGAGPHYHHHHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGG 233

Query: 207 -----------------------VEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKR 243
                                   +DRFSD+QLV+MSVRELNR LRG +K+EVIRLKQKR
Sbjct: 234 GGGGGAAGAGGALHPHHAAGGLHFDDRFSDEQLVTMSVRELNRQLRGVSKEEVIRLKQKR 293

Query: 244 RTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLAN 303
           RTLKNRGYAQSCR+KRVQQ+H LE+EK QL+QQV+ LKQE+SRL RERDAYK K EKL +
Sbjct: 294 RTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVDHLKQEISRLVRERDAYKEKYEKLVS 353

Query: 304 SGFREAGSTSDSPSSPEFFL 323
           SGFRE GS+SD+PSSPEFF+
Sbjct: 354 SGFRENGSSSDNPSSPEFFI 373


>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           A [Homo sapiens]
          Length = 353

 Score =  306 bits (783), Expect = 2e-83
 Identities = 192/377 (50%), Positives = 215/377 (57%), Gaps = 100/377 (26%)

Query: 1   MAAELSMGPELPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPL 60
           MAAEL+MG ELP+SPLA+EYVNDFDL+KF+VKKEP        R C RL P GS+SSTPL
Sbjct: 1   MAAELAMGAELPSSPLAIEYVNDFDLMKFEVKKEP----PEAERFCHRLPP-GSLSSTPL 55

Query: 61  STPCSSVPSSPSF---SP---------------------------------TEQKTHLED 84
           STPCSSVPSSPSF   SP                                 T  K  LED
Sbjct: 56  STPCSSVPSSPSFCAPSPGTGGGGGAGGGGGSSQAGGAPGPPSGGPGAVGGTSGKPALED 115

Query: 85  LYWMASNYQQMNPEALNLTPEDAVEALIGS------HPVPQPLQS--FDSFRG------- 129
           LYWM+     +NPEALNLTPEDAVEALIGS      H    P  +  +++FRG       
Sbjct: 116 LYWMSGYQHHLNPEALNLTPEDAVEALIGSGHHGAHHGAHHPAAAAAYEAFRGPGFAGGG 175

Query: 130 -------AHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQ 182
                   HHH  HH  H HHA              AH HHHHHH               
Sbjct: 176 GADDMGAGHHHGAHHAAHHHHA--------------AHHHHHHHHH-------------- 207

Query: 183 LPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQK 242
               H G G         AG +  +E+RFSDDQLVSMSVRELNR LRGF+K+EVIRLKQK
Sbjct: 208 ----HGGAG-----HGGGAGHHVRLEERFSDDQLVSMSVRELNRQLRGFSKEEVIRLKQK 258

Query: 243 RRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLA 302
           RRTLKNRGYAQSCR+KRVQQ+H LE+EK QL  QVEQLK EV RLA+ERD YK K EKLA
Sbjct: 259 RRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQVEQLKLEVGRLAKERDLYKEKYEKLA 318

Query: 303 NSGFREAGSTSDSPSSP 319
             G   +   +  P  P
Sbjct: 319 GRGGPGSAGGAGFPREP 335


>gi|5453802 neural retina leucine zipper [Homo sapiens]
          Length = 237

 Score =  195 bits (495), Expect = 5e-50
 Identities = 130/303 (42%), Positives = 162/303 (53%), Gaps = 87/303 (28%)

Query: 11  LPTSPLAMEYVNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPLSTPCSSVPSS 70
           LP SPLAMEYVNDFDL+KF+VK+EP     RPG P   L           STP SSVP S
Sbjct: 3   LPPSPLAMEYVNDFDLMKFEVKREP--SEGRPGPPTASLG----------STPYSSVPPS 50

Query: 71  PSFSP------TE-QKTHLEDLYWMASNYQQMNP-EALNLTPEDAVEALIGSHPVPQPLQ 122
           P+FS       TE  +  LE+LYW+A+  QQ+   EAL L+PE+A+E L G  PVP    
Sbjct: 51  PTFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQGQGPVPVD-- 108

Query: 123 SFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQ 182
                             PH  YPG+                       P  + A   Q 
Sbjct: 109 -----------------GPHGYYPGS-----------------------PEETGAQHVQ- 127

Query: 183 LPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQK 242
                                   + +RFSD  LVSMSVRELNR LRG  +DE +RLKQ+
Sbjct: 128 ------------------------LAERFSDAALVSMSVRELNRQLRGCGRDEALRLKQR 163

Query: 243 RRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLA 302
           RRTLKNRGYAQ+CR KR+QQ+  LE E+ +L  Q++ L+ EV+RLARERD YK +C++L 
Sbjct: 164 RRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRLT 223

Query: 303 NSG 305
           +SG
Sbjct: 224 SSG 226


>gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolog K
           [Homo sapiens]
          Length = 156

 Score =  115 bits (289), Expect = 4e-26
 Identities = 66/117 (56%), Positives = 80/117 (68%), Gaps = 4/117 (3%)

Query: 185 TSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRR 244
           T++P P   A      AG N  V    SDD+LVSMSVRELN+HLRG TK+EV RLKQ+RR
Sbjct: 2   TTNPKPNK-ALKVKKEAGENAPV---LSDDELVSMSVRELNQHLRGLTKEEVTRLKQRRR 57

Query: 245 TLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKL 301
           TLKNRGYA SCR KRV QK  LE ++ +L Q+VE+L +E S +  E DA + K E L
Sbjct: 58  TLKNRGYAASCRIKRVTQKEELERQRVELQQEVEKLARENSSMRLELDALRSKYEAL 114


>gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G
           [Homo sapiens]
          Length = 162

 Score =  110 bits (275), Expect = 2e-24
 Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 7/132 (5%)

Query: 188 PGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLK 247
           P  G  A       G NG+     +D++LV+MSVRELN+HLRG +K+E+++LKQ+RRTLK
Sbjct: 4   PNKGNKALKVKREPGENGT---SLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK 60

Query: 248 NRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFR 307
           NRGYA SCR KRV QK  LE +K +L Q+VE+L  E + +  E DA + K E L      
Sbjct: 61  NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTF--- 117

Query: 308 EAGSTSDSPSSP 319
            A + + SP +P
Sbjct: 118 -ARTVARSPVAP 128


>gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
           G [Homo sapiens]
          Length = 162

 Score =  110 bits (275), Expect = 2e-24
 Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 7/132 (5%)

Query: 188 PGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLK 247
           P  G  A       G NG+     +D++LV+MSVRELN+HLRG +K+E+++LKQ+RRTLK
Sbjct: 4   PNKGNKALKVKREPGENGT---SLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLK 60

Query: 248 NRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFR 307
           NRGYA SCR KRV QK  LE +K +L Q+VE+L  E + +  E DA + K E L      
Sbjct: 61  NRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTF--- 117

Query: 308 EAGSTSDSPSSP 319
            A + + SP +P
Sbjct: 118 -ARTVARSPVAP 128


>gi|239048388 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  106 bits (264), Expect = 3e-23
 Identities = 54/107 (50%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 212 SDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKT 271
           SD+ L+ +SVRELNRHLRG + +EV RLKQ+RRTLKNRGYA SCR KRV QK  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 272 QLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSS 318
           +L ++V++L +E + +  E DA + KCE L   GF  + + +  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|239048350 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  106 bits (264), Expect = 3e-23
 Identities = 54/107 (50%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 212 SDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKT 271
           SD+ L+ +SVRELNRHLRG + +EV RLKQ+RRTLKNRGYA SCR KRV QK  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 272 QLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSS 318
           +L ++V++L +E + +  E DA + KCE L   GF  + + +  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|6912490 transcription factor MAFF isoform a [Homo sapiens]
          Length = 164

 Score =  106 bits (264), Expect = 3e-23
 Identities = 54/107 (50%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 212 SDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKT 271
           SD+ L+ +SVRELNRHLRG + +EV RLKQ+RRTLKNRGYA SCR KRV QK  L+ +K+
Sbjct: 25  SDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKS 84

Query: 272 QLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSS 318
           +L ++V++L +E + +  E DA + KCE L   GF  + + +  P++
Sbjct: 85  ELEREVDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 129


>gi|239048390 transcription factor MAFF isoform b [Homo sapiens]
          Length = 135

 Score =  100 bits (249), Expect = 2e-21
 Identities = 51/102 (50%), Positives = 73/102 (71%), Gaps = 2/102 (1%)

Query: 217 VSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQ 276
           + +SVRELNRHLRG + +EV RLKQ+RRTLKNRGYA SCR KRV QK  L+ +K++L ++
Sbjct: 1   MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60

Query: 277 VEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSS 318
           V++L +E + +  E DA + KCE L   GF  + + +  P++
Sbjct: 61  VDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100


>gi|59938776 cAMP responsive element binding protein 5 isoform delta
           [Homo sapiens]
          Length = 369

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 60  LSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQ 119
           LS PC+S    P  S  E K  L+     A  +        N+     +  ++GS     
Sbjct: 77  LSNPCASPQVQPMHS--EAKMRLK----AALTHHPAAMSNGNMNTMGHMMEMMGSRQDQT 130

Query: 120 PLQSFDSFRGAHHHHHHHHPH------PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPP 173
           P           HHH H HPH      PHH YP     H    P  HPH   HHQ + P 
Sbjct: 131 P-----------HHHMHSHPHQHQTLPPHHPYP-----HQHQHPAHHPHPQPHHQQNHPH 174

Query: 174 SSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTK 233
             + S     P  H    PH                +    Q +        R  R    
Sbjct: 175 HHSHSHLHAHPAHHQ-TSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRR--VV 231

Query: 234 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARE 290
           DE    ++++   +NR  A  CR KR      LE +  +L Q   QL+ EVS L  E
Sbjct: 232 DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNE 288


>gi|59938774 cAMP responsive element binding protein 5 isoform beta
           [Homo sapiens]
          Length = 501

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 60  LSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQ 119
           LS PC+S    P  S  E K  L+     A  +        N+     +  ++GS     
Sbjct: 209 LSNPCASPQVQPMHS--EAKMRLK----AALTHHPAAMSNGNMNTMGHMMEMMGSRQDQT 262

Query: 120 PLQSFDSFRGAHHHHHHHHPH------PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPP 173
           P           HHH H HPH      PHH YP     H    P  HPH   HHQ + P 
Sbjct: 263 P-----------HHHMHSHPHQHQTLPPHHPYP-----HQHQHPAHHPHPQPHHQQNHPH 306

Query: 174 SSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTK 233
             + S     P  H    PH                +    Q +        R  R    
Sbjct: 307 HHSHSHLHAHPAHHQ-TSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRR--VV 363

Query: 234 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARE 290
           DE    ++++   +NR  A  CR KR      LE +  +L Q   QL+ EVS L  E
Sbjct: 364 DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNE 420


>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
           [Homo sapiens]
          Length = 475

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 60  LSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQ 119
           LS PC+S    P  S  E K  L+     A  +        N+     +  ++GS     
Sbjct: 183 LSNPCASPQVQPMHS--EAKMRLK----AALTHHPAAMSNGNMNTMGHMMEMMGSRQDQT 236

Query: 120 PLQSFDSFRGAHHHHHHHHPH------PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPP 173
           P           HHH H HPH      PHH YP     H    P  HPH   HHQ + P 
Sbjct: 237 P-----------HHHMHSHPHQHQTLPPHHPYP-----HQHQHPAHHPHPQPHHQQNHPH 280

Query: 174 SSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTK 233
             + S     P  H    PH                +    Q +        R  R    
Sbjct: 281 HHSHSHLHAHPAHHQ-TSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRR--VV 337

Query: 234 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARE 290
           DE    ++++   +NR  A  CR KR      LE +  +L Q   QL+ EVS L  E
Sbjct: 338 DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNE 394


>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
           [Homo sapiens]
          Length = 508

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 64/237 (27%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 60  LSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQ 119
           LS PC+S    P  S  E K  L+     A  +        N+     +  ++GS     
Sbjct: 216 LSNPCASPQVQPMHS--EAKMRLK----AALTHHPAAMSNGNMNTMGHMMEMMGSRQDQT 269

Query: 120 PLQSFDSFRGAHHHHHHHHPH------PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPP 173
           P           HHH H HPH      PHH YP     H    P  HPH   HHQ + P 
Sbjct: 270 P-----------HHHMHSHPHQHQTLPPHHPYP-----HQHQHPAHHPHPQPHHQQNHPH 313

Query: 174 SSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTK 233
             + S     P  H    PH                +    Q +        R  R    
Sbjct: 314 HHSHSHLHAHPAHHQ-TSPHPPLHTGNQAQVSPATQQMQPTQTIQPPQPTGGRRRR--VV 370

Query: 234 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARE 290
           DE    ++++   +NR  A  CR KR      LE +  +L Q   QL+ EVS L  E
Sbjct: 371 DEDPDERRRKFLERNRAAATRCRQKRKVWVMSLEKKAEELTQTNMQLQNEVSMLKNE 427


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 32/87 (36%), Positives = 38/87 (43%), Gaps = 19/87 (21%)

Query: 117 VPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSA 176
           VP+ +Q+ D+   +H HH+ HHP  HH                H HHHHHH   P P   
Sbjct: 24  VPEAVQN-DNHHASHGHHNSHHPQHHH----------------HHHHHHHHPPPPAPQPP 66

Query: 177 ASPAQQLPTSHPGPGPH--ATASATAA 201
             P QQ P   P P P    T  A AA
Sbjct: 67  PPPQQQQPPPPPPPAPQPPQTRGAPAA 93



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 30/86 (34%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 131 HHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA-------QQL 183
           HHHHHHHHP P    P       +  P   P       A  PP +  +PA       QQL
Sbjct: 50  HHHHHHHHPPPPAPQPPPPPQQQQPPPPPPP-------APQPPQTRGAPAADDDKGPQQL 102

Query: 184 PTSHPGPGPHAT----ASATAAGGNG 205
               P P P A     A A   GG G
Sbjct: 103 LLPPPPPPPPAAALDGAKADGLGGKG 128


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 31/72 (43%), Positives = 33/72 (45%), Gaps = 18/72 (25%)

Query: 129 GAH-HHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPA------Q 181
           G H H HHHHHPH HH +  A  AH         HHHHHH   PPP     P        
Sbjct: 133 GGHLHPHHHHHPHHHHHHHAA--AH---------HHHHHHPPQPPPPPPPPPPHMVHYFH 181

Query: 182 QLPTSHPGPGPH 193
           Q P + P P PH
Sbjct: 182 QQPPTAPQPPPH 193



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 30/86 (34%), Positives = 32/86 (37%), Gaps = 26/86 (30%)

Query: 130 AHHHHHH---HHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQ----ASPPPSSAASPAQQ 182
           AHHHHHH     P P               P  H  H+ H Q      PPP   + P QQ
Sbjct: 154 AHHHHHHHPPQPPPPPPP------------PPPHMVHYFHQQPPTAPQPPPHLPSQPPQQ 201

Query: 183 LP-------TSHPGPGPHATASATAA 201
            P        SHPG    A A A AA
Sbjct: 202 PPQQSQPQQPSHPGKMQEAAAVAAAA 227


>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
          Length = 1114

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 37/176 (21%)

Query: 31   VKKEPLGRAERPGRPCTRLQPAGSVSSTPLST------PCSSVPSSPSFSPTEQKTHLED 84
            +++      E P RP   +  + S+  +   +      P + +PS+P+  P      L  
Sbjct: 944  MRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKPPPQAHLPSAPALPPPHPPVVLPH 1003

Query: 85   LYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQPLQSFDSFRGAHHHHHHH------H 138
            L    + +    PE L   P+ A+    G H     +Q+   +   HHHHHHH      H
Sbjct: 1004 LQHSVAGHHLGPPEGL---PQAAMH---GHHTQYCHMQNPPPY---HHHHHHHPPQHIQH 1054

Query: 139  PHPHHAYPGAGVAHDELGPHAHPH------------HHHHHQASPPP--SSAASPA 180
             H +H  P  G  H   G HAH H            HHH    +PPP  SS A P+
Sbjct: 1055 AHQYHHGPHGG--HPAYGAHAHGHPPLPSAHVGHTVHHHGQPPAPPPPTSSKAKPS 1108


>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
          Length = 274

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 8/99 (8%)

Query: 93  QQMNPEALNLTPEDAVEALIGSHP---VPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAG 149
           ++ N  AL L P +   +L GS P    PQP           H H H H H H       
Sbjct: 47  REQNLRALELEPLELEGSLAGSPPGLAPPQPPPHRSRLEAPAHAHSHPHVHVHPL----- 101

Query: 150 VAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHP 188
           + H    PHAH H H HH A P P          P S+P
Sbjct: 102 LHHGPAQPHAHAHPHPHHHALPHPPPTHLSVPPRPWSYP 140


>gi|149408126 nemo like kinase [Homo sapiens]
          Length = 527

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 28/73 (38%), Positives = 31/73 (42%), Gaps = 17/73 (23%)

Query: 129 GAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHP 188
           G HHHHHHH PH                PH H HHH  H   P  ++A  P QQ    H 
Sbjct: 26  GHHHHHHHHLPHLPP-------------PHLHHHHHPQHHLHPGSAAAVHPVQQ----HT 68

Query: 189 GPGPHATASATAA 201
                A A+A AA
Sbjct: 69  SSAAAAAAAAAAA 81



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 17/85 (20%)

Query: 131 HHHHHHHH------PHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAA------S 178
           HHHHHHHH      PH HH +      H       HP   H   A+   ++AA      +
Sbjct: 27  HHHHHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLN 86

Query: 179 PAQQ---LPTSHPG--PGPHATASA 198
           P QQ    P+  PG  PGP A A A
Sbjct: 87  PGQQQPYFPSPAPGQAPGPAAAAPA 111


>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
          Length = 354

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 134 HHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPH 193
           HHHHHPH HH          +   H H HHHHHHQ       A + A  L    PG    
Sbjct: 275 HHHHHPHAHHPL-------SQSSGHHHHHHHHHHQGYGGSGLAFNSADCLDYKEPGAAAA 327

Query: 194 ATA 196
           ++A
Sbjct: 328 SSA 330



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 115 HPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVA 151
           H  P          G HHHHHHHH   H  Y G+G+A
Sbjct: 277 HHHPHAHHPLSQSSGHHHHHHHHH---HQGYGGSGLA 310



 Score = 31.6 bits (70), Expect = 1.00
 Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 10/92 (10%)

Query: 113 GSHPVPQPLQSFDSFRGAHHHHH----HHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQ 168
           GS+    P  S   F G     +    H H HPH   P   +A   +  H   HHHH H 
Sbjct: 229 GSYGQGYPTPSSSYFGGVDCSSYLAPMHSHHHPHQLSP---MAPSSMAGH---HHHHPHA 282

Query: 169 ASPPPSSAASPAQQLPTSHPGPGPHATASATA 200
             P   S+          H G G    A  +A
Sbjct: 283 HHPLSQSSGHHHHHHHHHHQGYGGSGLAFNSA 314


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 48/174 (27%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 33  KEPLGRAERPGRPCTRLQPAGSVSSTPLSTPCSSVPSSPSFSPTEQKTHLEDLYWMASNY 92
           ++P+   ERP RP   LQP G V     S P S+  ++  F P  Q        ++    
Sbjct: 518 QQPVFPRERPVRPA--LQPPGPVGILHFSQPGSA--TTRPFIPPRQP-------FLPGPG 566

Query: 93  QQMNPEALNLTPEDAVEALIGSHPVPQPLQSFDSFRGAHHHHHH--HHPHPHHAYPGAGV 150
           Q   P       +  +   +     PQP Q        H   H   H P P H  P    
Sbjct: 567 QPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQ-- 624

Query: 151 AHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGGN 204
            H    P  H HHHHHH  S PP         +P S P   PH   +   A  +
Sbjct: 625 -HPPQHPPQHQHHHHHHHLSVPPPPL------MPMSQPQFRPHVQTAQPQASSS 671


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 21/66 (31%)

Query: 132 HHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPG 191
           HHHHHHH H                     HHHHHH+A PP  S   P    P  H G  
Sbjct: 337 HHHHHHHHH---------------------HHHHHHRAQPPQQSHHPPHHHRPQPHLGSF 375

Query: 192 PHATAS 197
           P + +S
Sbjct: 376 PESCSS 381



 Score = 29.6 bits (65), Expect = 3.8
 Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 18/95 (18%)

Query: 118 PQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHH---HQASPPPS 174
           P P          HHHHH   P P  ++              HP HHH    H  S P S
Sbjct: 334 PPPHHHHHHHHHHHHHHHRAQP-PQQSH--------------HPPHHHRPQPHLGSFPES 378

Query: 175 SAASPAQQLPTSHPGPGPHATASATAAGGNGSVED 209
            ++       + H        +S +++  + S E+
Sbjct: 379 CSSDSESSSYSDHAANDSDFGSSLSSSSNSVSSEE 413


>gi|5453774 nuclear factor, erythroid derived 2 isoform 1 [Homo
           sapiens]
          Length = 373

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 174 SSAASPAQQLPTS-HPGPGPHATASATAAGGNGSVEDR--------FSDDQLVSMSVREL 224
           S+   PA + P +  P  GP   A  TA G  GS ++R        F  D++V++ V + 
Sbjct: 192 SNYTLPAAETPLALEPSSGP-VRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDF 250

Query: 225 NRHLRGF--TKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQ 282
           N  L  +  T+ ++  ++  RR  KN+  AQ+CR ++++    LE E  +L  + E+L +
Sbjct: 251 NELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLR 310

Query: 283 EVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPE 320
                 R  +  + +  +L    F+     S +  SPE
Sbjct: 311 ARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPE 348


>gi|209862847 nuclear factor, erythroid derived 2 isoform 2 [Homo
           sapiens]
          Length = 373

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 12/158 (7%)

Query: 174 SSAASPAQQLPTS-HPGPGPHATASATAAGGNGSVEDR--------FSDDQLVSMSVREL 224
           S+   PA + P +  P  GP   A  TA G  GS ++R        F  D++V++ V + 
Sbjct: 192 SNYTLPAAETPLALEPSSGP-VRAKPTARGEAGSRDERRALAMKIPFPTDKIVNLPVDDF 250

Query: 225 NRHLRGF--TKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQ 282
           N  L  +  T+ ++  ++  RR  KN+  AQ+CR ++++    LE E  +L  + E+L +
Sbjct: 251 NELLARYPLTESQLALVRDIRRRGKNKVAAQNCRKRKLETIVQLERELERLTNERERLLR 310

Query: 283 EVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPE 320
                 R  +  + +  +L    F+     S +  SPE
Sbjct: 311 ARGEADRTLEVMRQQLTELYRDIFQHLRDESGNSYSPE 348


>gi|32698730 nuclear fragile X mental retardation protein
           interacting protein 2 [Homo sapiens]
          Length = 695

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 16/71 (22%)

Query: 132 HHHHHHHPH---------PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQ 182
           HHH HHHPH         PHH +      H     H+H HHHHHH    P       A+ 
Sbjct: 12  HHHSHHHPHHHPQQQQQQPHHHH------HYYFYNHSHNHHHHHHH-QQPHQYLQHGAEG 64

Query: 183 LPTSHPGPGPH 193
            P + P P  H
Sbjct: 65  SPKAQPKPLKH 75



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 131 HHHHHHHHPHPH----HAYPGAGVAHDELGPHAHPHHHHHHQASP 171
           +HHHHHHH  PH    H   G+  A  +   H   H    HQ +P
Sbjct: 44  NHHHHHHHQQPHQYLQHGAEGSPKAQPKPLKHEQKHTLQQHQETP 88


>gi|18104952 T-box 1 isoform C [Homo sapiens]
          Length = 495

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 37/107 (34%), Positives = 46/107 (42%), Gaps = 15/107 (14%)

Query: 96  NPEALNLTPEDAVEALIGSHPVPQPLQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDEL 155
           NPE L L    A E L   HP   P  ++D + GA        P P   YP  G+     
Sbjct: 397 NPE-LRLEAPGASEPL-HHHPYKYPAAAYDHYLGAKSR-----PAP---YPLPGLRGHGY 446

Query: 156 GPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAG 202
            PHAHPHHHHH     P S AA+ A     +      +++A A   G
Sbjct: 447 HPHAHPHHHHH-----PVSPAAAAAAAAAAAAAAANMYSSAGAAPPG 488



 Score = 31.6 bits (70), Expect = 1.00
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 104 PEDAVEALIG--SHPVPQPLQSFDSFRGAHHHHHHHHPHPHH-AYPGAGVAHDELGPHAH 160
           P  A +  +G  S P P PL      RG  +H H H  H HH   P A  A       A 
Sbjct: 419 PAAAYDHYLGAKSRPAPYPLPGL---RGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAA 475

Query: 161 PHHHHHHQASPPPS 174
            + +    A+PP S
Sbjct: 476 ANMYSSAGAAPPGS 489


>gi|169636435 caudal type homeobox 2 [Homo sapiens]
          Length = 313

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 7/144 (4%)

Query: 157 PHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATAAGGNGSVEDRFSDDQL 216
           PH HPHHH HH A+  PS A+   Q L    PGP   A A   + GG    + R   + +
Sbjct: 115 PHHHPHHHPHHPAA-APSCASGLLQTLNPGPPGPAATAAAEQLSPGG----QRRNLCEWM 169

Query: 217 VSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQ 276
              + + L   ++  TKD+   +    + L+        RY  +++K  L        +Q
Sbjct: 170 RKPAQQSLGSQVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQ 229

Query: 277 VEQLKQEVSRLARERDAYKVKCEK 300
           V+   Q  +R A+ER   K K ++
Sbjct: 230 VKIWFQ--NRRAKERKINKKKLQQ 251


>gi|55770830 chromobox homolog 4 [Homo sapiens]
          Length = 560

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 14/47 (29%)

Query: 121 LQSFDSFRGAHHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHHH 167
           L ++D  R  H   HH HPHPHH              H H HHHHHH
Sbjct: 368 LLAWDPARNTHPPSHHPHPHPHH--------------HHHHHHHHHH 400



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 8/66 (12%)

Query: 131 HHHHHHHHPHPHHAYPGAGVAHDELGPHAHPHHHHH--------HQASPPPSSAASPAQQ 182
           H HHHHHH H HH   G  ++H      +  H               S P     SPA +
Sbjct: 387 HPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPCKKRLTARSISTPTCLGGSPAAE 446

Query: 183 LPTSHP 188
            P   P
Sbjct: 447 RPADLP 452


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.128    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,569,202
Number of Sequences: 37866
Number of extensions: 891010
Number of successful extensions: 11347
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 359
Number of HSP's that attempted gapping in prelim test: 6884
Number of HSP's gapped (non-prelim): 2227
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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