Guide to the Human Genome
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Name: ZBTB8B Sequence: fasta or formatted (495aa) NCBI GI: 224591419
Description:

zinc finger and BTB domain containing 8B

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         48          15
 C cysteine            3.8         19           1
 D aspartate           8.3         41           5
 E glutamate           7.3         36           2
 F phenylalanine       3.0         15           2
 G glycine             6.1         30           3
 H histidine           3.2         16           2
 I isoleucine          4.2         21           2
 K lysine              4.4         22           1
 L leucine             8.3         41           2
 M methionine          1.8          9           2
 N asparagine          3.0         15           1
 P proline             4.6         23           2
 Q glutamine           3.4         17           2
 R arginine            5.7         28           2
 S serine             10.3         51           2
 T threonine           3.6         18           1
 V valine              5.9         29           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 8B 
ZBTB8A                0.227   zinc finger and BTB domain containing 8A 
ZBTB46                0.193   zinc finger and BTB domain containing 46 
ZBTB10                0.102   zinc finger and BTB domain containing 10 isoform b ...
ZBTB10                0.102   zinc finger and BTB domain containing 10 isoform a ...
ZNF238                0.100   zinc finger protein 238 isoform 2 
ZBTB7A                0.100   zinc finger and BTB domain containing 7A 
ZNF238                0.100   zinc finger protein 238 isoform 1 
ZBTB17                0.097   zinc finger and BTB domain containing 17 
MYNN                  0.089   myoneurin 
PATZ1                 0.078   POZ (BTB) and AT hook containing zinc finger 1 long ...
PATZ1                 0.078   POZ (BTB) and AT hook containing zinc finger 1 long ...
PATZ1                 0.078   POZ (BTB) and AT hook containing zinc finger 1 long ...
ZBTB44                0.077   zinc finger and BTB domain containing 44 
ZBTB43                0.074   zinc finger and BTB domain containing 43 
ZBTB43                0.074   zinc finger and BTB domain containing 43 
ZBTB42                0.069   zinc finger and BTB domain containing 42 
ZBTB3                 0.064   zinc finger and BTB domain containing 3 
HIC2                  0.063   hypermethylated in cancer 2 
ZBTB5                 0.060   zinc finger and BTB domain containing 5 
ZNF509                0.060   zinc finger protein 509 
KLHL29                0.055   PREDICTED: kelch-like 29 (Drosophila) 
KLHL29                0.055   PREDICTED: kelch-like 29 (Drosophila) 
KLHL29                0.055   PREDICTED: kelch repeat and BTB (POZ) domain contai...
HIC1                  0.055   hypermethylated in cancer 1 isoform 2 
HIC1                  0.055   hypermethylated in cancer 1 isoform 1 
GZF1                  0.054   GDNF-inducible zinc finger protein 1 
IPP                   0.051   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.051   intracisternal A particle-promoted polypeptide isof...
ZNF648                0.051   zinc finger protein 648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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