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Search of human proteins with 23308574
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23308574 sprouty homolog 4 isoform 1 [Homo sapiens]
(322 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23308574 sprouty homolog 4 isoform 1 [Homo sapiens] 688 0.0
gi|188595697 sprouty homolog 4 isoform 2 [Homo sapiens] 642 0.0
gi|40788001 sprouty homolog 1, antagonist of FGF signaling [Homo... 254 7e-68
gi|40538726 sprouty homolog 1, antagonist of FGF signaling [Homo... 254 7e-68
gi|5032115 sprouty 2 [Homo sapiens] 241 8e-64
gi|27501452 sprouty homolog 3 [Homo sapiens] 229 3e-60
gi|189571671 sprouty-related protein with EVH-1 domain 2 isoform... 59 8e-09
gi|189571669 sprouty-related protein with EVH-1 domain 2 isoform... 59 8e-09
gi|22749221 sprouty-related protein 1 with EVH-1 domain [Homo sa... 57 3e-08
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 55 1e-07
gi|93102379 low density lipoprotein-related protein 1B precursor... 38 0.014
gi|154759249 keratin associated protein 10-11 [Homo sapiens] 37 0.018
gi|71164886 vaccinia related kinase 3 isoform 1 [Homo sapiens] 37 0.031
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 36 0.053
gi|126012562 low density lipoprotein-related protein 1 [Homo sap... 34 0.15
gi|239753765 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|113415439 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|113414819 PREDICTED: hypothetical protein [Homo sapiens] 34 0.15
gi|33946327 nucleoporin 214kDa [Homo sapiens] 34 0.20
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.20
gi|55770876 notch4 preproprotein [Homo sapiens] 34 0.20
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 33 0.26
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.34
gi|150170722 G protein-coupled receptor 50 [Homo sapiens] 33 0.34
gi|239757282 PREDICTED: similar to Fc fragment of IgG binding pr... 33 0.44
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 33 0.44
gi|239751787 PREDICTED: hypothetical protein XP_002348012 [Homo ... 33 0.44
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.44
gi|154146262 Fc fragment of IgG binding protein [Homo sapiens] 33 0.44
gi|16554449 zonadhesin isoform 3 [Homo sapiens] 33 0.44
>gi|23308574 sprouty homolog 4 isoform 1 [Homo sapiens]
Length = 322
Score = 688 bits (1776), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MLSPLPTGPLEACFSVQSRTSSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTI 60
MLSPLPTGPLEACFSVQSRTSSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTI
Sbjct: 1 MLSPLPTGPLEACFSVQSRTSSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTI 60
Query: 61 LPIDQVKTSHVENDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPS 120
LPIDQVKTSHVENDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPS
Sbjct: 61 LPIDQVKTSHVENDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPS 120
Query: 121 SVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFL 180
SVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFL
Sbjct: 121 SVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFL 180
Query: 181 LCEACGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEG 240
LCEACGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEG
Sbjct: 181 LCEACGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEG 240
Query: 241 SCADHPCSCSRSNCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKH 300
SCADHPCSCSRSNCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKH
Sbjct: 241 SCADHPCSCSRSNCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKH 300
Query: 301 TNSVICKAASGDAKTSRPDKPF 322
TNSVICKAASGDAKTSRPDKPF
Sbjct: 301 TNSVICKAASGDAKTSRPDKPF 322
>gi|188595697 sprouty homolog 4 isoform 2 [Homo sapiens]
Length = 299
Score = 642 bits (1657), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 24 MEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPIDQVKTSHVENDYIDNPSLAL 83
MEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPIDQVKTSHVENDYIDNPSLAL
Sbjct: 1 MEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPIDQVKTSHVENDYIDNPSLAL 60
Query: 84 TTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPV 143
TTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPV
Sbjct: 61 TTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPV 120
Query: 144 ADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKECASPRTLPSCW 203
ADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKECASPRTLPSCW
Sbjct: 121 ADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKECASPRTLPSCW 180
Query: 204 VCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMGA 263
VCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMGA
Sbjct: 181 VCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMGA 240
Query: 264 LSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICKAASGDAKTSRPDKPF 322
LSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICKAASGDAKTSRPDKPF
Sbjct: 241 LSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICKAASGDAKTSRPDKPF 299
>gi|40788001 sprouty homolog 1, antagonist of FGF signaling [Homo
sapiens]
Length = 319
Score = 254 bits (649), Expect = 7e-68
Identities = 135/298 (45%), Positives = 186/298 (62%), Gaps = 29/298 (9%)
Query: 39 VMVQPLLDSR--MSHSRLQHPLTILPIDQVKTSHVENDYIDNPSL----ALTTGPKRTRG 92
V+ QP LDSR + + R P IL +DQ+K N+Y + PS+ A T P++ +
Sbjct: 15 VIQQPSLDSRQRLDYEREIQPTAILSLDQIKAIRGSNEYTEGPSVVKRPAPRTAPRQEKH 74
Query: 93 GAP-ELAPTPARCDQDVTH-----HWI-------------SFSGRPSSVSSSSSTSSDQR 133
E+ P + + H H + + +G +S S+SS SS+Q
Sbjct: 75 ERTHEIIPINVNNNYEHRHTSHLGHAVLPSNARGPILSRSTSTGSAASSGSNSSASSEQG 134
Query: 134 LLDHMAPP-PVADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKE 192
LL P PV S RA+R QPK + DLKG ++ +L +H +CE CGKCKC E
Sbjct: 135 LLGRSPPTRPVPGHRSERAIRTQPKQLIVD--DLKG-SLKEDLTQHKFICEQCGKCKCGE 191
Query: 193 CASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRS 252
C +PRTLPSC CN++CLCSA+++V YGTCMCLV+GIFYHC+N+D+ S +D+PCSCS+S
Sbjct: 192 CTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYSDNPCSCSQS 251
Query: 253 NCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICKAAS 310
+CC+R+ MGA+S+ LPCLLCY PA GC+KL +R YD + RPGCRCK++N+V CK S
Sbjct: 252 HCCSRYLCMGAMSLFLPCLLCYPPAKGCLKLCRRCYDWIHRPGCRCKNSNTVYCKLES 309
>gi|40538726 sprouty homolog 1, antagonist of FGF signaling [Homo
sapiens]
Length = 319
Score = 254 bits (649), Expect = 7e-68
Identities = 135/298 (45%), Positives = 186/298 (62%), Gaps = 29/298 (9%)
Query: 39 VMVQPLLDSR--MSHSRLQHPLTILPIDQVKTSHVENDYIDNPSL----ALTTGPKRTRG 92
V+ QP LDSR + + R P IL +DQ+K N+Y + PS+ A T P++ +
Sbjct: 15 VIQQPSLDSRQRLDYEREIQPTAILSLDQIKAIRGSNEYTEGPSVVKRPAPRTAPRQEKH 74
Query: 93 GAP-ELAPTPARCDQDVTH-----HWI-------------SFSGRPSSVSSSSSTSSDQR 133
E+ P + + H H + + +G +S S+SS SS+Q
Sbjct: 75 ERTHEIIPINVNNNYEHRHTSHLGHAVLPSNARGPILSRSTSTGSAASSGSNSSASSEQG 134
Query: 134 LLDHMAPP-PVADQASPRAVRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKE 192
LL P PV S RA+R QPK + DLKG ++ +L +H +CE CGKCKC E
Sbjct: 135 LLGRSPPTRPVPGHRSERAIRTQPKQLIVD--DLKG-SLKEDLTQHKFICEQCGKCKCGE 191
Query: 193 CASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRS 252
C +PRTLPSC CN++CLCSA+++V YGTCMCLV+GIFYHC+N+D+ S +D+PCSCS+S
Sbjct: 192 CTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVKGIFYHCSNDDEGDSYSDNPCSCSQS 251
Query: 253 NCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICKAAS 310
+CC+R+ MGA+S+ LPCLLCY PA GC+KL +R YD + RPGCRCK++N+V CK S
Sbjct: 252 HCCSRYLCMGAMSLFLPCLLCYPPAKGCLKLCRRCYDWIHRPGCRCKNSNTVYCKLES 309
>gi|5032115 sprouty 2 [Homo sapiens]
Length = 315
Score = 241 bits (614), Expect = 8e-64
Identities = 125/276 (45%), Positives = 169/276 (61%), Gaps = 29/276 (10%)
Query: 54 LQHPLTILPIDQVKTSHVENDYIDNPSLALTTGPK-----------RTRGGAPELAPTP- 101
L + +L +DQ++ N+Y + P++ G K G PE P
Sbjct: 34 LTQQVHVLSLDQIRAIRNTNEYTEGPTVVPRPGLKPAPRPSTQHKHERLHGLPEHRQPPR 93
Query: 102 ---------ARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLL-DHMAPPPVADQASPRA 151
AR + +S R S+ +S+SS+SS+QRLL + PVAD
Sbjct: 94 LQHSQVHSSARAPLSRSISTVSSGSRSSTRTSTSSSSSEQRLLGSSFSSGPVADGI---- 149
Query: 152 VRIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKECASPRTLPSCWVCNQECLC 211
+R+QPK +P +LK P +L H CE CGKCKCKEC PR LPS W+C+++CLC
Sbjct: 150 IRVQPKS-ELKPGELK-PLSKEDLGLHAYRCEDCGKCKCKECTYPRPLPSDWICDKQCLC 207
Query: 212 SAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMGALSVVLPCL 271
SAQ +++YGTC+C V+G+FYHC+N DDE +CAD+PCSCS+S+CC RWS MG +S+ LPCL
Sbjct: 208 SAQNVIDYGTCVCCVKGLFYHCSN-DDEDNCADNPCSCSQSHCCTRWSAMGVMSLFLPCL 266
Query: 272 LCYLPATGCVKLAQRGYDRLRRPGCRCKHTNSVICK 307
CYLPA GC+KL Q YDR+ RPGCRCK++N+V CK
Sbjct: 267 WCYLPAKGCLKLCQGCYDRVNRPGCRCKNSNTVCCK 302
>gi|27501452 sprouty homolog 3 [Homo sapiens]
Length = 288
Score = 229 bits (583), Expect = 3e-60
Identities = 124/285 (43%), Positives = 163/285 (57%), Gaps = 49/285 (17%)
Query: 60 ILPIDQVKTSHVENDYIDNP----------------------SLA-LTTGPKRTRGGAPE 96
ILPI+Q++++H NDY++ P SLA + T R+ +
Sbjct: 12 ILPIEQLRSTHASNDYVERPPAPCKQALSSPSLIVQTHKSDWSLATMPTSLPRSLSQCHQ 71
Query: 97 LAPTPARCDQDVTHHWISFSGRPSSVSSS---SSTSSDQRLLDHMAPPPVADQASPRAVR 153
L P P Q SS++SS S+T+SDQRLL + P P + +R
Sbjct: 72 LQPLPQHLSQ-------------SSIASSMSHSTTASDQRLLASITPSP----SGQSIIR 114
Query: 154 IQPKVVHCQPLD--LKGPAVPP--ELDKHFLLCEACGKCKCKECASPRTLPSCWVCNQEC 209
QP D LKG A +H +CE CG+CKC C + R LPSCW+CNQ C
Sbjct: 115 TQPGAGVHPKADGALKGEAEQSAGHPSEHLFICEECGRCKCVPCTAARPLPSCWLCNQRC 174
Query: 210 LCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMGALSVVLP 269
LCSA++L++YGTC+C V+G+FYHC+ DDE +CAD PCSC S+C RW+ M +S+ LP
Sbjct: 175 LCSAESLLDYGTCLCCVKGLFYHCST-DDEDNCADEPCSCGPSSCFVRWAAMSLISLFLP 233
Query: 270 CLLCYLPATGCVKLAQRGYDRLRRPGCRCK-HTNSVICKAASGDA 313
CL CYLP GC+ L Q+GYD LRRPGCRCK HTN+V K +SG A
Sbjct: 234 CLCCYLPTRGCLHLCQQGYDSLRRPGCRCKRHTNTVCRKISSGSA 278
>gi|189571671 sprouty-related protein with EVH-1 domain 2 isoform b
[Homo sapiens]
Length = 415
Score = 58.5 bits (140), Expect = 8e-09
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 207 QECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSN--CCARWSFMGAL 264
Q+ S +T + +CM + YHC + D EG D PCSC S+ C RW + AL
Sbjct: 324 QDAPDSVRTCIRRVSCMWCADSMLYHCMS-DPEGDYTD-PCSCDTSDEKFCLRWMALIAL 381
Query: 265 SVVLPCLLCYLPATGC 280
S + PC+ CYLP C
Sbjct: 382 SFLAPCMCCYLPLRAC 397
>gi|189571669 sprouty-related protein with EVH-1 domain 2 isoform a
[Homo sapiens]
Length = 418
Score = 58.5 bits (140), Expect = 8e-09
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 207 QECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSN--CCARWSFMGAL 264
Q+ S +T + +CM + YHC + D EG D PCSC S+ C RW + AL
Sbjct: 327 QDAPDSVRTCIRRVSCMWCADSMLYHCMS-DPEGDYTD-PCSCDTSDEKFCLRWMALIAL 384
Query: 265 SVVLPCLLCYLPATGC 280
S + PC+ CYLP C
Sbjct: 385 SFLAPCMCCYLPLRAC 400
>gi|22749221 sprouty-related protein 1 with EVH-1 domain [Homo
sapiens]
Length = 444
Score = 56.6 bits (135), Expect = 3e-08
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 221 TCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSN--CCARWSFMGALSVVLPCLLCYLPAT 278
+CM + + YHC + D EG +D PCSC S+ C RW + ALS ++PC+ CY+P
Sbjct: 367 SCMLCAESMLYHCMS-DSEGDFSD-PCSCDTSDDKFCLRWLALVALSFIVPCMCCYVPLR 424
Query: 279 GC 280
C
Sbjct: 425 MC 426
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 54.7 bits (130), Expect = 1e-07
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 216 LVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNC--CARWSFMGALSVVLPCLLC 273
LV +C+ + + YHC + D EG +D PC+C + ARW+ + ALS+ +PCL C
Sbjct: 325 LVRRLSCLWCAESLLYHCLS-DAEGDFSD-PCACEPGHPRPAARWAALAALSLAVPCLCC 382
Query: 274 YLPATGCVKLAQR 286
Y P C +A R
Sbjct: 383 YAPLRACHWVAAR 395
>gi|93102379 low density lipoprotein-related protein 1B precursor
[Homo sapiens]
Length = 4599
Score = 37.7 bits (86), Expect = 0.014
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 23/85 (27%)
Query: 193 CASPRTLPSCWVCNQECLCSAQT----LVNYGTCMCLVQGIF---------YHCTNEDDE 239
C + R +P W+C++E C QT + TC L Q + +HC ++DD
Sbjct: 934 CGNGRCIPRAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDC 993
Query: 240 G----------SCADHPCSCSRSNC 254
G SC D+ CS C
Sbjct: 994 GDGSDEVGCVHSCFDNQFRCSSGRC 1018
Score = 28.9 bits (63), Expect = 6.4
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 17/78 (21%)
Query: 192 ECASPRTLPSCWVCN--QEC---------LCSAQTL----VNYGTCMCLVQGIFYHCTNE 236
+C + R +P W+C+ +C C+A+T + G C+ + + C E
Sbjct: 892 KCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRA--WLCDRE 949
Query: 237 DDEGSCADHPCSCSRSNC 254
DD G D SC C
Sbjct: 950 DDCGDQTDEMASCEFPTC 967
>gi|154759249 keratin associated protein 10-11 [Homo sapiens]
Length = 298
Score = 37.4 bits (85), Expect = 0.018
Identities = 54/237 (22%), Positives = 80/237 (33%), Gaps = 53/237 (22%)
Query: 97 LAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVADQASPR----AV 152
L TP C V+ + PS+ S ++S + P +SP V
Sbjct: 45 LVCTPVSC---VSSPCCQAACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSPCQQACCV 101
Query: 153 RIQPKVVHCQPLDLKGPAVPPELDKHFLLCEACGKCKCKE-------CASPRTLPSCWV- 204
+ K V C+P+ VP + C A C C++ CAS P+C V
Sbjct: 102 PVCCKTVCCKPVC----CVP-------VCCGAASSC-CRQSSCQPACCASSSCQPACCVP 149
Query: 205 --CNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCADHPCSCSRSNCCARWSFMG 262
C C S TC +ED C C + CC S+
Sbjct: 150 VCCKPVCCVS--------TC------------SEDSSSCCQQSSCQPA---CCTSSSYQQ 186
Query: 263 ALSVVLPCLLCYLPATGCVKLAQR-GYDRLRRPGCRCKHTNSVICKAASGDAKTSRP 318
A V + C Y CV + R R ++P C+ + C+ +S + P
Sbjct: 187 ACCVPVCCKTVYCKPICCVPVCSRASSSRCQQPSCQPACCTTSCCRPSSSVSLLCHP 243
>gi|71164886 vaccinia related kinase 3 isoform 1 [Homo sapiens]
Length = 474
Score = 36.6 bits (83), Expect = 0.031
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 61 LPIDQVKTSHVENDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWIS-FSGRP 119
LP+++ HV + NP ++ G KR + E +P + VT +S FS
Sbjct: 26 LPVEE----HVGSQTFVNPHVSSFQGSKRGLNSSFETSPKKVKWSSTVTSPRLSLFSDGD 81
Query: 120 SSVSSSSSTSSDQRLLDHMAPP-----PVADQASPRAVRIQPKVVHCQP 163
SS S + +SS++ PP P + SP+ R P+ C P
Sbjct: 82 SSESEDTLSSSERSKGSGSRPPTPKSSPQKTRKSPQVTRGSPQKTSCSP 130
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 35.8 bits (81), Expect = 0.053
Identities = 29/100 (29%), Positives = 38/100 (38%), Gaps = 26/100 (26%)
Query: 185 CGKCKCKE------CASPRTL-----PSCWVC--NQECLCSAQTLVNYGTCMC------- 224
CGKCKC + C P S +C +Q+ +CS + G C C
Sbjct: 112 CGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAGTCHCGRCKCDNSDGSG 171
Query: 225 LVQGIF-----YHCTNEDDEGSCADH-PCSCSRSNCCARW 258
LV G F C +++ E C H C C C A W
Sbjct: 172 LVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGW 211
>gi|126012562 low density lipoprotein-related protein 1 [Homo sapiens]
Length = 4544
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 18/80 (22%)
Query: 193 CASPRTLPSCWVCNQECLCSAQT----LVNYGTCMCLVQ---------GIFYHCTNEDDE 239
CAS R +P W C+ + C ++ Y TC L Q I + C N++D
Sbjct: 943 CASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDC 1002
Query: 240 GSCAD-----HPCSCSRSNC 254
G +D H CS ++ C
Sbjct: 1003 GDNSDEAGCSHSCSSTQFKC 1022
Score = 29.6 bits (65), Expect = 3.8
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 17/78 (21%)
Query: 192 ECASPRTLPSCWVCN-----------QECLCSAQTL-VNYGTC---MCLVQGIFYHCTNE 236
+C + R +P+ W+C+ CSA+T N +C C+ I + C +
Sbjct: 901 KCENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCI--PISWTCDLD 958
Query: 237 DDEGSCADHPCSCSRSNC 254
DD G +D SC+ C
Sbjct: 959 DDCGDRSDESASCAYPTC 976
Score = 29.3 bits (64), Expect = 4.9
Identities = 22/90 (24%), Positives = 30/90 (33%), Gaps = 32/90 (35%)
Query: 183 EACGKCKCK----ECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDD 238
E C + C+ C + R +P W C+ + C + D
Sbjct: 3529 EECDERTCEPYQFRCKNNRCVPGRWQCDYD----------------------NDCGDNSD 3566
Query: 239 EGSCADHPC-----SCSRSNCCA-RWSFMG 262
E SC PC SC+ C A RW G
Sbjct: 3567 EESCTPRPCSESEFSCANGRCIAGRWKCDG 3596
>gi|239753765 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 34.3 bits (77), Expect = 0.15
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 11/126 (8%)
Query: 15 SVQSRTSSPMEPPIPQSAPLTPNSV-MVQPLLDSRMSHSRLQHPLTILPIDQVKT-SHVE 72
S+ S P++P LT SV M+Q + H L LT + ++T SH
Sbjct: 64 SMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPT 123
Query: 73 NDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISF------SGRPSSVSSSS 126
++D T + + + P P D +T+H ISF S P+S SSSS
Sbjct: 124 QPHLDQ--FLTTQSVSMIQTVSHPIQPHP-HLDPFLTNHPISFNDPDCQSPHPASASSSS 180
Query: 127 STSSDQ 132
SDQ
Sbjct: 181 GPVSDQ 186
>gi|113415439 PREDICTED: hypothetical protein [Homo sapiens]
Length = 206
Score = 34.3 bits (77), Expect = 0.15
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 11/126 (8%)
Query: 15 SVQSRTSSPMEPPIPQSAPLTPNSV-MVQPLLDSRMSHSRLQHPLTILPIDQVKT-SHVE 72
S+ S P++P LT SV M+Q + H L LT + ++T SH
Sbjct: 78 SMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPT 137
Query: 73 NDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISF------SGRPSSVSSSS 126
++D T + + + P P D +T+H ISF S P+S SSSS
Sbjct: 138 QPHLDQ--FLTTQSVSMIQTVSHPIQPHP-HLDPFLTNHPISFNDPDCQSPHPASASSSS 194
Query: 127 STSSDQ 132
SDQ
Sbjct: 195 GPVSDQ 200
>gi|113414819 PREDICTED: hypothetical protein [Homo sapiens]
Length = 206
Score = 34.3 bits (77), Expect = 0.15
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 11/126 (8%)
Query: 15 SVQSRTSSPMEPPIPQSAPLTPNSV-MVQPLLDSRMSHSRLQHPLTILPIDQVKT-SHVE 72
S+ S P++P LT SV M+Q + H L LT + ++T SH
Sbjct: 78 SMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPIQPHPHLDQFLTTQSVSMIQTVSHPT 137
Query: 73 NDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISF------SGRPSSVSSSS 126
++D T + + + P P D +T+H ISF S P+S SSSS
Sbjct: 138 QPHLDQ--FLTTQSVSMIQTVSHPIQPHP-HLDPFLTNHPISFNDPDCQSPHPASASSSS 194
Query: 127 STSSDQ 132
SDQ
Sbjct: 195 GPVSDQ 200
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 33.9 bits (76), Expect = 0.20
Identities = 45/177 (25%), Positives = 69/177 (38%), Gaps = 22/177 (12%)
Query: 8 GPLEACFSVQSRTS---SPMEPPI-PQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPI 63
GP F S+ S +P P+ P +A + S +P L+S S + + P
Sbjct: 516 GPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPS 575
Query: 64 DQVKTSHVENDYIDNPSLALTTGPKRTRGGAPELAPTPARCDQDVT---HHWISFSGRPS 120
TS V+ + + + A T+ P + AP ++P + + H S PS
Sbjct: 576 FPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPS 635
Query: 121 SVSSSSS------------TSSDQRLLDHMAP---PPVADQASPRAVRIQPKVVHCQ 162
SV SS +SS + +P PP A SP+A +QP V Q
Sbjct: 636 SVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQAKSLQPAVAEKQ 692
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.9 bits (76), Expect = 0.20
Identities = 48/193 (24%), Positives = 69/193 (35%), Gaps = 25/193 (12%)
Query: 5 LPTGPL-EACFSVQSRTSSPMEPPIPQSAPLT--PNSVMVQPLLDSRMS-------HSRL 54
LP PL EA + SP+ PP P+ +PL+ P S PL +S +S L
Sbjct: 474 LPASPLPEALHLSRPLEESPLSPP-PEESPLSPPPESSPFSPLEESPLSPPEESPPSPAL 532
Query: 55 QHPLTILPIDQVKTSHVENDYIDNPSLALTTGP---KRTRGGAPELAP-------TPARC 104
+ PL+ P + E + P L T P PE +P +P
Sbjct: 533 ETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSP 592
Query: 105 DQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVADQASP----RAVRIQPKVVH 160
+ + + F P S S S ++PPP SP + P+V
Sbjct: 593 PPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSR 652
Query: 161 CQPLDLKGPAVPP 173
PL + PP
Sbjct: 653 LSPLPVVSRLSPP 665
>gi|55770876 notch4 preproprotein [Homo sapiens]
Length = 2003
Score = 33.9 bits (76), Expect = 0.20
Identities = 26/87 (29%), Positives = 30/87 (34%), Gaps = 15/87 (17%)
Query: 182 CEACGKCKCKECASPRTLPSC---WV---CNQECLCSAQTLVNYGTCMCLVQGIFYHC-- 233
C G+C + AS R SC W C CSA VN G C+ I HC
Sbjct: 127 CSKRGRCHIQ--ASGRPQCSCMPGWTGEQCQLRDFCSANPCVNGGVCLATYPQIQCHCPP 184
Query: 234 -----TNEDDEGSCADHPCSCSRSNCC 255
E D C P C + C
Sbjct: 185 GFEGHACERDVNECFQDPGPCPKGTSC 211
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 33.5 bits (75), Expect = 0.26
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 185 CGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCAD 244
CG C C +C+ + P C C+ C S C C C + SC
Sbjct: 87 CGSCGCSQCSCYK--PCC--CSSGCGSSCCQSSCCKPCCCQSSCCKPCCCSSGCGSSCCQ 142
Query: 245 HPC---SCSRSNCC 255
C CS+S+CC
Sbjct: 143 SSCCNPCCSQSSCC 156
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 33.1 bits (74), Expect = 0.34
Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 2 LSPLPTGPLEACFSVQSRTSSPMEPP---IPQSAPLTPNSVMVQPLLDSRMSHSRLQHPL 58
+SPL P +A ++ + + P P AP +P++ + L + + P+
Sbjct: 778 MSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP---PV 834
Query: 59 TILPIDQVKTSHVENDYIDNPSLALTTGPKRTRGG-------APELAPTPARCDQDVTHH 111
P+ QV S + + P T GP + G AP P P+R
Sbjct: 835 LAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS---- 890
Query: 112 WISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLD-LKGPA 170
+ SG + SSS+TS+ + L + + P ASP ++ C P +GPA
Sbjct: 891 --TLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP---DAELAACHPAAWSRGPA 945
Query: 171 VP 172
P
Sbjct: 946 PP 947
Score = 28.9 bits (63), Expect = 6.4
Identities = 51/198 (25%), Positives = 72/198 (36%), Gaps = 38/198 (19%)
Query: 3 SPLPTGPLEACFSVQSRT-----SSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHP 57
SPL PL+A S+ S + SS + PP+ + L P S+ P + ++ L++
Sbjct: 482 SPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPP---ASLTTPPLENL 538
Query: 58 LTILP------IDQVKTSHVEND------YIDNPSLALTTGPKRTRGG---APELAPTPA 102
++ P + T H+E + P LTT P T P AP PA
Sbjct: 539 PSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP-PA 597
Query: 103 RCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQ 162
+ G PS S +T Q +A PP+ SP P
Sbjct: 598 LASPPL-------QGLPSPPLSPLATPPPQ-APPXLALPPLQAPPSP------PASPPLS 643
Query: 163 PLDLKGPAVPPELDKHFL 180
PL P P L H L
Sbjct: 644 PLATPSPQAPNALAVHLL 661
Score = 28.5 bits (62), Expect = 8.4
Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 36/165 (21%)
Query: 23 PMEPPIPQSAPLTPNSVMVQPLLDS--------------RMSHSRLQHPLTILPIDQVKT 68
P PP+ PL P S P L + M+ +Q P ++ I ++
Sbjct: 332 PPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQV 391
Query: 69 SH-VENDYIDNP--SLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSS 125
H + + + P LAL++ T G+P L TH +++ S R + S +
Sbjct: 392 PHSLTSPSLQAPPSPLALSSLQATTSLGSPTL---------QATHSFLTMSPRQTQASLT 442
Query: 126 S-----STSSD----QRLLDHMAPPPVADQASPRAVRI-QPKVVH 160
S ST D Q L A PP+ SP + P +H
Sbjct: 443 SPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIH 487
>gi|150170722 G protein-coupled receptor 50 [Homo sapiens]
Length = 617
Score = 33.1 bits (74), Expect = 0.34
Identities = 35/141 (24%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 29 PQSAPLTPNSVMVQPLLDSRMS---HSR------LQHPLTILPIDQVKTSHVENDYIDNP 79
P S P S +P+ +S HS+ HP + TSH E D P
Sbjct: 462 PDSVHFKPASSNPKPITGHHVSAGSHSKSAFSAATSHPKPTTGHIKPATSHAEPTTADYP 521
Query: 80 SLALTTGPKRTRGGAPELAPTPARCDQDVTHHWISFSGRPSSVSSSSSTSSDQRLLDHMA 139
A T+ PK T PEL+ + + H S P S +SS + + +
Sbjct: 522 KPATTSHPKPTAADNPELSASHCPEIPAIAHPVSDDSDLPES-ASSPAAGPTKPAASQLE 580
Query: 140 PPPVADQASPRAVRIQPKVVH 160
+AD P V H
Sbjct: 581 SDTIADLPDPTVVTTSTNDYH 601
>gi|239757282 PREDICTED: similar to Fc fragment of IgG binding
protein [Homo sapiens]
Length = 1403
Score = 32.7 bits (73), Expect = 0.44
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 178 HFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSA------QTLVNYGTCMCLVQGIFY 231
H+ LC C ++P S C + C+C A T V G C CL G +Y
Sbjct: 744 HYELCGDSCPVSCPSLSAPEGCESA--CREGCVCDAGFVLSGDTCVPVGQCGCLHDGRYY 801
Query: 232 HCTNEDDEGSCADHPCSC 249
G + C C
Sbjct: 802 PLGEVFYPGPECERRCEC 819
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 32.7 bits (73), Expect = 0.44
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 5 LPTGPLEACFSVQSRTSSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPID 64
L T PL+A S + S P + P SA L P S + P + P+ P+
Sbjct: 523 LATPPLQALPSPPA--SFPGQAPFSPSASL-PMSPLATPPPQAP--------PVLAAPLL 571
Query: 65 QVKTSHVENDYIDNPSLALTTGPKRTRGG-------APELAPTPARCDQDVTHHWISFSG 117
QV S + + P T GP + G AP P P+R + SG
Sbjct: 572 QVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS------TLSG 625
Query: 118 RPSSVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLD-LKGPAVP 172
+ SSS+TS+ + L + + P ASP ++ C P +GPA P
Sbjct: 626 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP---DAELAACHPAAWSRGPAPP 678
>gi|239751787 PREDICTED: hypothetical protein XP_002348012 [Homo
sapiens]
Length = 3003
Score = 32.7 bits (73), Expect = 0.44
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 178 HFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSA------QTLVNYGTCMCLVQGIFY 231
H+ LC C ++P S C + C+C A T V G C CL G +Y
Sbjct: 2344 HYELCGDSCPVSCPSLSAPEGCESA--CREGCVCDAGFVLSGDTCVPVGQCGCLHDGRYY 2401
Query: 232 HCTNEDDEGSCADHPCSC 249
G + C C
Sbjct: 2402 PLGEVFYPGPECERRCEC 2419
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.44
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 5 LPTGPLEACFSVQSRTSSPMEPPIPQSAPLTPNSVMVQPLLDSRMSHSRLQHPLTILPID 64
L T PL+A S + S P + P SA L P S + P + P+ P+
Sbjct: 484 LATPPLQALPSPPA--SFPGQAPFSPSASL-PMSPLATPPPQAP--------PVLAAPLL 532
Query: 65 QVKTSHVENDYIDNPSLALTTGPKRTRGG-------APELAPTPARCDQDVTHHWISFSG 117
QV S + + P T GP + G AP P P+R + SG
Sbjct: 533 QVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSS------TLSG 586
Query: 118 RPSSVSSSSSTSSDQRLLDHMAPPPVADQASPRAVRIQPKVVHCQPLD-LKGPAVP 172
+ SSS+TS+ + L + + P ASP ++ C P +GPA P
Sbjct: 587 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPP---DAELAACHPAAWSRGPAPP 639
>gi|154146262 Fc fragment of IgG binding protein [Homo sapiens]
Length = 5405
Score = 32.7 bits (73), Expect = 0.44
Identities = 21/78 (26%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 178 HFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSA------QTLVNYGTCMCLVQGIFY 231
H+ LC C ++P S C + C+C A T V G C CL G +Y
Sbjct: 4744 HYELCGDSCPVSCPSLSAPEGCESA--CREGCVCDAGFVLSGDTCVPVGQCGCLHDGRYY 4801
Query: 232 HCTNEDDEGSCADHPCSC 249
G + C C
Sbjct: 4802 PLGEVFYPGPECERRCEC 4819
Score = 30.4 bits (67), Expect = 2.2
Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 178 HFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSA------QTLVNYGTCMCLVQGIFY 231
H+ LC C ++P S C + C+C A T V G C CL +Y
Sbjct: 2342 HYELCGDSCPGSCPSLSAPEGCESA--CREGCVCDAGFVLSGDTCVPVGQCGCLHDDRYY 2399
Query: 232 HCTNEDDEGSCADHPCSC 249
G D C C
Sbjct: 2400 PLGQTFYPGPGCDSLCRC 2417
Score = 30.4 bits (67), Expect = 2.2
Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 178 HFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSA------QTLVNYGTCMCLVQGIFY 231
H+ LC C ++P S C + C+C A T V G C CL +Y
Sbjct: 3543 HYELCGDSCPGSCPSLSAPEGCESA--CREGCVCDAGFVLSGDTCVPVGQCGCLHDDRYY 3600
Query: 232 HCTNEDDEGSCADHPCSC 249
G D C C
Sbjct: 3601 PLGQTFYPGPGCDSLCRC 3618
>gi|16554449 zonadhesin isoform 3 [Homo sapiens]
Length = 2812
Score = 32.7 bits (73), Expect = 0.44
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 14/78 (17%)
Query: 188 CKCK-ECASPRTLPSCW-VCNQECLCSAQTL------VNYGTCMCLVQGIFYHCTNEDDE 239
C C C SPR PSC +C + C+C+ L + +C C +Y E
Sbjct: 1053 CACPASCKSPR--PSCGPLCREGCVCNPGFLFSDNHCIQASSCNCFYNNDYYEPGAEWFS 1110
Query: 240 GSCADHPCSC---SRSNC 254
+C +H C C SR C
Sbjct: 1111 PNCTEH-CRCWPGSRVEC 1127
Score = 30.0 bits (66), Expect = 2.9
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 9/72 (12%)
Query: 190 CKECASPRTLPSCWVCNQECLC------SAQTLVNYGTCMCLVQGIFYHCTNED--DEGS 241
C +PR P C + C C S + V G C C YH E E +
Sbjct: 1829 CSSINNPRDCPKALPCAESCECQKGHILSGTSCVPLGQCGCTDPAGSYHPVGERWYTENT 1888
Query: 242 CADHPCSCSRSN 253
C C+CS N
Sbjct: 1889 CT-RLCTCSVHN 1899
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,894,827
Number of Sequences: 37866
Number of extensions: 866569
Number of successful extensions: 3934
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 3677
Number of HSP's gapped (non-prelim): 332
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.