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Search of human proteins with 23308561
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23308561 RNA binding motif protein 24 isoform 2 [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens] 382 e-107
gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens] 360 e-100
gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens] 356 6e-99
gi|34577107 RNA-binding region containing protein 1 isoform a [H... 194 5e-50
gi|34577105 RNA-binding region containing protein 1 isoform b [H... 82 3e-16
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 51 7e-07
gi|24497554 homeobox A13 [Homo sapiens] 45 3e-05
gi|24497589 aristaless related homeobox [Homo sapiens] 45 3e-05
gi|19111150 angiomotin isoform 2 [Homo sapiens] 45 5e-05
gi|166064029 angiomotin isoform 1 [Homo sapiens] 45 5e-05
gi|149408126 nemo like kinase [Homo sapiens] 44 8e-05
gi|13540521 basic helix-loop-helix domain containing, class B, 3... 43 2e-04
gi|4758392 forkhead box D1 [Homo sapiens] 43 2e-04
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 42 4e-04
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 42 4e-04
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 42 4e-04
gi|13491166 pumilio 1 isoform 2 [Homo sapiens] 41 5e-04
gi|66932909 pumilio 1 isoform 1 [Homo sapiens] 41 5e-04
gi|126352608 elastin isoform e precursor [Homo sapiens] 41 5e-04
gi|126352446 elastin isoform d precursor [Homo sapiens] 41 5e-04
gi|126352322 elastin isoform c precursor [Homo sapiens] 41 5e-04
gi|126352700 elastin isoform b precursor [Homo sapiens] 41 5e-04
gi|126352440 elastin isoform a precursor [Homo sapiens] 41 5e-04
gi|5902108 SRY-box 21 [Homo sapiens] 41 5e-04
gi|73476377 LBXCOR1 homolog [Homo sapiens] 41 7e-04
gi|6912372 forkhead box D3 [Homo sapiens] 40 0.001
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 40 0.001
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 39 0.002
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 39 0.003
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap... 39 0.004
>gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens]
Length = 191
Score = 382 bits (982), Expect = e-107
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MYVCLCVSVAKVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQ 60
MYVCLCVSVAKVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQ
Sbjct: 1 MYVCLCVSVAKVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQ 60
Query: 61 LHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAA 120
LHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAA
Sbjct: 61 LHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAA 120
Query: 121 AAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQY 180
AAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQY
Sbjct: 121 AAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQY 180
Query: 181 QPQQLQTDRMQ 191
QPQQLQTDRMQ
Sbjct: 181 QPQQLQTDRMQ 191
>gi|221139802 RNA binding motif protein 24 isoform 1 [Homo sapiens]
Length = 236
Score = 360 bits (923), Expect = e-100
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 12 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFG 71
VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFG
Sbjct: 57 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFG 116
Query: 72 IPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQY 131
IPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQY
Sbjct: 117 IPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQY 176
Query: 132 PYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 191
PYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ
Sbjct: 177 PYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 236
>gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens]
Length = 178
Score = 356 bits (914), Expect = 6e-99
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 14 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 73
MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP
Sbjct: 1 MADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIP 60
Query: 74 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 133
AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY
Sbjct: 61 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 120
Query: 134 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 191
AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ
Sbjct: 121 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 178
>gi|34577107 RNA-binding region containing protein 1 isoform a [Homo
sapiens]
Length = 239
Score = 194 bits (492), Expect = 5e-50
Identities = 111/182 (60%), Positives = 120/182 (65%), Gaps = 24/182 (13%)
Query: 12 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFG 71
VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPR +Q GFA GVQQLHP LIQR +G
Sbjct: 80 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAIGVQQLHPTLIQRTYG 139
Query: 72 IPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGA--AYAQYSAAAAAAAAAAAYD 129
+ HY+YP A VQP VVIP P + +S PYI+YT A AYAQY A YD
Sbjct: 140 LTPHYIYPPAIVQPSVVIP-AAPVPSLSS--PYIEYTPASPAYAQY--------PPATYD 188
Query: 130 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDR 189
QYPYAASPA A Y AV Q ++AAAP A F QYQ QLQ DR
Sbjct: 189 QYPYAASPATAASFVGYSYPAAVPQALSAAAP-----------AGTTFVQYQAPQLQPDR 237
Query: 190 MQ 191
MQ
Sbjct: 238 MQ 239
>gi|34577105 RNA-binding region containing protein 1 isoform b [Homo
sapiens]
Length = 121
Score = 82.0 bits (201), Expect = 3e-16
Identities = 39/42 (92%), Positives = 40/42 (95%)
Query: 12 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPG 53
VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPR +Q G
Sbjct: 80 VTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTG 121
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 50.8 bits (120), Expect = 7e-07
Identities = 39/90 (43%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 90 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 149
P +P +AAA+ AA A +AAAAAAAAAA AA+PA A
Sbjct: 488 PLKRPFSAAAAIA-------AAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAA 540
Query: 150 YAVQQPITAAAPGTAAAAAAAAAAAAAFGQ 179
A P AAAP AAA AAAA+AA + Q
Sbjct: 541 AAAPAPAPAAAPAVAAAPAAAASAAPSHSQ 570
Score = 35.8 bits (81), Expect = 0.023
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 6/51 (11%)
Query: 132 PYAASPAAAGYVTAGGY------GYAVQQPITAAAPGTAAAAAAAAAAAAA 176
P P+++G +++G G +++P +AAA AAAAAAAAAAAAA
Sbjct: 463 PRTQLPSSSGKISSGNSFPPQQAGSPLKRPFSAAAAIAAAAAAAAAAAAAA 513
Score = 27.7 bits (60), Expect = 6.3
Identities = 18/43 (41%), Positives = 19/43 (44%)
Query: 134 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
A SP + A A AAA AAA A A AAAAA
Sbjct: 485 AGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAA 527
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 45.4 bits (106), Expect = 3e-05
Identities = 32/61 (52%), Positives = 35/61 (57%)
Query: 116 SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAA 175
+AAAAAAAAAAA A PA A Y A + +AA AAAAAAAAAAAA
Sbjct: 73 AAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAA 132
Query: 176 A 176
A
Sbjct: 133 A 133
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/60 (56%), Positives = 36/60 (60%), Gaps = 15/60 (25%)
Query: 117 AAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
AAAAAAAAAAA AAAG AGG G+ P AAA G + AAAAAAAAAA
Sbjct: 38 AAAAAAAAAAA----------AAAG---AGGGGFP--HPAAAAAGGNFSVAAAAAAAAAA 82
Score = 40.0 bits (92), Expect = 0.001
Identities = 38/92 (41%), Positives = 43/92 (46%), Gaps = 24/92 (26%)
Query: 109 GAAYAQYSAAAAAA-----------AAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPIT 157
GAA A +AAAAAA AAAAA + AA+ AAA A + P
Sbjct: 37 GAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAP 96
Query: 158 AA-------------APGTAAAAAAAAAAAAA 176
A AP +AAAAAAAAAAAAA
Sbjct: 97 LAPGAASAYSSAPGEAPPSAAAAAAAAAAAAA 128
Score = 39.3 bits (90), Expect = 0.002
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 96 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAA---------YDQYPYAASP-AAAGYVTA 145
AAA + + AA A + + AAAAAAAA +P +P AA+ Y +A
Sbjct: 49 AAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSA 108
Query: 146 GGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
G + P +AAA AAAAAAAAAAAA+
Sbjct: 109 PG-----EAPPSAAAAAAAAAAAAAAAAAAS 134
Score = 37.7 bits (86), Expect = 0.006
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 117 AAAAAAAAAAAYDQ------YPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 170
AAAAAAAAAAA +Q +P +P AA ++ AAA AAAAAAA
Sbjct: 73 AAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAA 132
Query: 171 AAAAAAFGQYQP 182
A+++ G P
Sbjct: 133 ASSSGGPGPAGP 144
Score = 37.4 bits (85), Expect = 0.008
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 88 VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGG 147
++ H P A A++ Y G A +AAAAAAAAAAA AAA ++GG
Sbjct: 90 LMAHPAPLAPGAASA-YSSAPGEAPPSAAAAAAAAAAAAA----------AAAAASSSGG 138
Query: 148 YGYAVQQPITAA---APGTAAAAAAAAAAAAAFGQY 180
G A AA +P +AAA +++ AA +G +
Sbjct: 139 PGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYF 174
Score = 36.2 bits (82), Expect = 0.018
Identities = 39/112 (34%), Positives = 46/112 (41%), Gaps = 25/112 (22%)
Query: 90 PHVQPTAAAASTTP-YIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAA-------- 140
P A+A S+ P + AA A +AAAAAAAAAA+ P A PA A
Sbjct: 96 PLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSP 155
Query: 141 ----------------GYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
GY +G Y A P A A A+AAAAAA A
Sbjct: 156 CSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFA 207
Score = 27.7 bits (60), Expect = 6.3
Identities = 34/113 (30%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 90 PHVQPTAAAASTTPYIDYTGAAYAQYSA----------AAAAAAAAAAYDQYPYAASP-- 137
PH P AAAA + AA A +A A A AA+AY P A P
Sbjct: 59 PH--PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSA 116
Query: 138 -----AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQL 185
AAA A + P A G AA + +AAA P L
Sbjct: 117 AAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAAL 169
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 149 GYAVQQPITAAAPGTAAAAAAAAAAAAA 176
G V + G AAAAAAAAAAAAA
Sbjct: 24 GGLVADELNKNMEGAAAAAAAAAAAAAA 51
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 45.4 bits (106), Expect = 3e-05
Identities = 37/74 (50%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPG-----T 163
G Q +AAAAAAAAAAA AAA TAG G A P A PG
Sbjct: 93 GGRLLQGAAAAAAAAAAAA----------AAAATATAGPRGEAPPPPPPTARPGERPDGA 142
Query: 164 AAAAAAAAAAAAAF 177
AAAAAAAAAAAA+
Sbjct: 143 GAAAAAAAAAAAAW 156
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 147 GYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDR 189
G G +Q AAA AAAAAAA A A G+ P T R
Sbjct: 92 GGGRLLQGAAAAAAAAAAAAAAAATATAGPRGEAPPPPPPTAR 134
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 148 YGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
YG + + AA AAAAAAAAAAA A
Sbjct: 89 YGPGGGRLLQGAAAAAAAAAAAAAAAATA 117
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 44.7 bits (104), Expect = 5e-05
Identities = 39/87 (44%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 96 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP 155
AA +T I T A A + AAAAA AAAA A SPA A TA A
Sbjct: 485 AAITATAATITTTMVAAAPVAVAAAAAPAAAA------APSPATAA-ATAAAVSPAAAGQ 537
Query: 156 ITAAAPGTAAAAAAAAAAAAAFGQYQP 182
I AAA +AAA A +AAAAA Q P
Sbjct: 538 IPAAASVASAAAVAPSAAAAAAVQVAP 564
Score = 39.7 bits (91), Expect = 0.002
Identities = 39/96 (40%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 94 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAA---AAYDQYPYAASPAAAGYVTAGGYGY 150
P A AA+ P AA A A AAA AAA AA Q P AAS A+A V
Sbjct: 503 PVAVAAAAAP-----AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAA 557
Query: 151 AVQQPITAA-----APGTAAAAAAAAAAAAAFGQYQ 181
A Q AA AP A AAA A+A Q Q
Sbjct: 558 AAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQ 593
Score = 32.3 bits (72), Expect = 0.25
Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 92 VQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 151
V AAA+T I T A AAA A AAA A+PAAA A
Sbjct: 474 VPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA-------AAPAAA----------A 516
Query: 152 VQQPITAAAPGTAAAAAAA---AAAAA 175
P TAAA A + AAA AAA+
Sbjct: 517 APSPATAAATAAAVSPAAAGQIPAAAS 543
Score = 30.4 bits (67), Expect = 0.97
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 97 AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPI 156
AAA P A+ A +A A +AAAAAA P A +P A + V P
Sbjct: 533 AAAGQIP----AAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL--------VPVPA 580
Query: 157 TAAAPGTAAAAAAAAAAAAA 176
AAA +A A A +A A
Sbjct: 581 PAAAQASAPAQTQAPTSAPA 600
Score = 30.0 bits (66), Expect = 1.3
Identities = 29/73 (39%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 110 AAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 169
AA A S A AAAA A AA A A +T A AAAP AAAA +
Sbjct: 467 AAVAPISVPAPVAAAATA------AAITATAATITTTMVAAAPVAVAAAAAPA-AAAAPS 519
Query: 170 AAAAAAAFGQYQP 182
A AAA P
Sbjct: 520 PATAAATAAAVSP 532
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 44.7 bits (104), Expect = 5e-05
Identities = 39/87 (44%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 96 AAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP 155
AA +T I T A A + AAAAA AAAA A SPA A TA A
Sbjct: 894 AAITATAATITTTMVAAAPVAVAAAAAPAAAA------APSPATAA-ATAAAVSPAAAGQ 946
Query: 156 ITAAAPGTAAAAAAAAAAAAAFGQYQP 182
I AAA +AAA A +AAAAA Q P
Sbjct: 947 IPAAASVASAAAVAPSAAAAAAVQVAP 973
Score = 39.7 bits (91), Expect = 0.002
Identities = 39/96 (40%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 94 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAA---AAYDQYPYAASPAAAGYVTAGGYGY 150
P A AA+ P AA A A AAA AAA AA Q P AAS A+A V
Sbjct: 912 PVAVAAAAAP-----AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAA 966
Query: 151 AVQQPITAA-----APGTAAAAAAAAAAAAAFGQYQ 181
A Q AA AP A AAA A+A Q Q
Sbjct: 967 AAVQVAPAAPAPVPAPALVPVPAPAAAQASAPAQTQ 1002
Score = 32.3 bits (72), Expect = 0.25
Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 92 VQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 151
V AAA+T I T A AAA A AAA A+PAAA A
Sbjct: 883 VPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA-------AAPAAA----------A 925
Query: 152 VQQPITAAAPGTAAAAAAA---AAAAA 175
P TAAA A + AAA AAA+
Sbjct: 926 APSPATAAATAAAVSPAAAGQIPAAAS 952
Score = 30.4 bits (67), Expect = 0.97
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 12/80 (15%)
Query: 97 AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPI 156
AAA P A+ A +A A +AAAAAA P A +P A + V P
Sbjct: 942 AAAGQIP----AAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL--------VPVPA 989
Query: 157 TAAAPGTAAAAAAAAAAAAA 176
AAA +A A A +A A
Sbjct: 990 PAAAQASAPAQTQAPTSAPA 1009
Score = 30.0 bits (66), Expect = 1.3
Identities = 29/73 (39%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 110 AAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 169
AA A S A AAAA A AA A A +T A AAAP AAAA +
Sbjct: 876 AAVAPISVPAPVAAAATA------AAITATAATITTTMVAAAPVAVAAAAAPA-AAAAPS 928
Query: 170 AAAAAAAFGQYQP 182
A AAA P
Sbjct: 929 PATAAATAAAVSP 941
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 43.9 bits (102), Expect = 8e-05
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 28/102 (27%)
Query: 75 HYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYA 134
H+ +PQ + PG +AA+ P +T +A A +AAAAAAA Q PY
Sbjct: 45 HHHHPQHHLHPG----------SAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYF 94
Query: 135 ASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
SPA APG AAAA A AAAA
Sbjct: 95 PSPA------------------PGQAPGPAAAAPAQVQAAAA 118
Score = 28.9 bits (63), Expect = 2.8
Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 151 AVQQPITAAAPGTAAAAAAAAAAAAAF--GQYQP 182
A P+ AAAAAAAAAAAA GQ QP
Sbjct: 59 AAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQP 92
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/24 (62%), Positives = 17/24 (70%)
Query: 163 TAAAAAAAAAAAAAFGQYQPQQLQ 186
T++AAAAAAAAAAA P Q Q
Sbjct: 68 TSSAAAAAAAAAAAAAMLNPGQQQ 91
>gi|13540521 basic helix-loop-helix domain containing, class B, 3
[Homo sapiens]
Length = 482
Score = 42.7 bits (99), Expect = 2e-04
Identities = 49/160 (30%), Positives = 62/160 (38%), Gaps = 45/160 (28%)
Query: 18 AAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYV 77
AAA A P+P + A L + ++ G G PA PF +P ++
Sbjct: 298 AAAAAALLGPDPAAAAALLRPDAALLSS---LVAFGGGGGAPFPQPAAAAAPFCLPFCFL 354
Query: 78 YPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASP 137
P+AAAA P++D +G Y AAAAA YP +P
Sbjct: 355 ---------------SPSAAAAYVQPFLDKSGLEKYLYPAAAAAPFPLL----YPGIPAP 395
Query: 138 AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAF 177
AAA AAAAAAAAAAAAAF
Sbjct: 396 AAA-----------------------AAAAAAAAAAAAAF 412
Score = 30.0 bits (66), Expect = 1.3
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 8/83 (9%)
Query: 105 IDYTGAAYAQYSAAAAAAAAAAAYDQYPYAAS----PAAAGYVT----AGGYGYAVQQPI 156
+D G AAAAAAA P AA+ P AA + GG G QP
Sbjct: 282 LDSRGGGSGGGPGGGAAAAAAALLGPDPAAAAALLRPDAALLSSLVAFGGGGGAPFPQPA 341
Query: 157 TAAAPGTAAAAAAAAAAAAAFGQ 179
AAAP + +AAAA+ Q
Sbjct: 342 AAAAPFCLPFCFLSPSAAAAYVQ 364
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 42.7 bits (99), Expect = 2e-04
Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 90 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 149
P + P AAAA + + GAA A AAAAA + P P A GY G G
Sbjct: 225 PLLPPNAAAAESL-LLRGAGAA----GGAGDPAAAAALFPPAP-PPPPHAYGYGPYG-CG 277
Query: 150 YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 182
Y +Q P A P AAAAAAAAAAAF + P
Sbjct: 278 YGLQLP-PYAPPSALFAAAAAAAAAAAFHPHSP 309
Score = 42.4 bits (98), Expect = 2e-04
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 94 PTAAAASTTPYI--DYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYA 151
P A+A + +P+ G + +AAAAAA AAAA P + AA + G G A
Sbjct: 352 PGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCA 411
Query: 152 VQQPITAAAPGTAAAAAAAAAAAAA 176
Q + AA T + AAAAAAA++
Sbjct: 412 AQAAVGPAAALTRSLVAAAAAAASS 436
Score = 35.4 bits (80), Expect = 0.030
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 82 FVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAAS---PA 138
+ P + AAAA+ P+ + AAA A A Y +P A+ P
Sbjct: 285 YAPPSALFAAAAAAAAAAAFHPHSPPPPPP--PHGAAAELARTAFGYRPHPLGAALPGPL 342
Query: 139 AAGYVTAGGYG--------YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 182
A AGG G ++++ I + AAAAAAA AAAAA P
Sbjct: 343 PASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSP 394
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 41.6 bits (96), Expect = 4e-04
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 85 PGVVIPHVQPTAAAASTTPY-IDYTGA-AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGY 142
P P PT A + P +D A AQ SAAAAAAAAAAA +PAAA
Sbjct: 62 PFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAST 121
Query: 143 VTAGGYGY---------AVQQPITAAAPGTAAAAAAAAAAAA 175
V V P AAP +AA AAAAA A
Sbjct: 122 VDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATA 163
Score = 32.7 bits (73), Expect = 0.20
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 155 PITAAAPGTAAAAAAAAAAAAAFGQYQP 182
P+ AAA +AAAAAAAAAAAAA P
Sbjct: 87 PVLAAAQESAAAAAAAAAAAAAVAAAPP 114
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 41.6 bits (96), Expect = 4e-04
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 11/102 (10%)
Query: 85 PGVVIPHVQPTAAAASTTPY-IDYTGA-AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGY 142
P P PT A + P +D A AQ SAAAAAAAAAAA +PAAA
Sbjct: 62 PFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAAST 121
Query: 143 VTAGGYGY---------AVQQPITAAAPGTAAAAAAAAAAAA 175
V V P AAP +AA AAAAA A
Sbjct: 122 VDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATA 163
Score = 32.7 bits (73), Expect = 0.20
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 155 PITAAAPGTAAAAAAAAAAAAAFGQYQP 182
P+ AAA +AAAAAAAAAAAAA P
Sbjct: 87 PVLAAAQESAAAAAAAAAAAAAVAAAPP 114
Score = 27.3 bits (59), Expect = 8.2
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 108 TGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV-QQPI 156
TG +AAAAAAAAAAA AA P A G + +G G V QP+
Sbjct: 428 TGEVCPMAAAAAAAAAAAAA----AVAAPPTAVGSL-SGAEGVPVSSQPL 472
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 90 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYG 149
P+ +P + P + AA A ++AA+AAAAAAA A+S AAAG +GG
Sbjct: 328 PYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAA--AAAAASSAAAAGAPPSGG-- 383
Query: 150 YAVQQPITAAAPGTAAAAAAAAAAAAA 176
P + + ++ +AAAAAAAAAA
Sbjct: 384 ---SAPCSCLSCHSSQSAAAAAAAAAA 407
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
Query: 116 SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITA-AAPGTAAAAAAAAAAA 174
SAAAAAAAAAAA A+S AAAG +GG P + + + +AAAAAAAAA
Sbjct: 358 SAAAAAAAAAAA------ASSAAAAGAPPSGG-----SAPCSCLSCHSSQSAAAAAAAAA 406
Query: 175 AAFG 178
AA G
Sbjct: 407 AALG 410
Score = 35.4 bits (80), Expect = 0.030
Identities = 37/121 (30%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 73 PAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP 132
P+ Y Y +P+ + P++ T AA AAAAA+ AAA P
Sbjct: 258 PSFYTYMMTHAAATGSLPYPFHSHVPLHYYPHVGVTAAA------AAAAASGAAAAASSP 311
Query: 133 YAASPAAAGYVTAGGYGYA-------------VQQPITAA----APGTAAAAAAAAAAAA 175
+A S A + Y+ Q P AA A AAAAAAAAAAA+
Sbjct: 312 FATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAGLNSAASAAAAAAAAAAAAS 371
Query: 176 A 176
+
Sbjct: 372 S 372
Score = 29.6 bits (65), Expect = 1.7
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 14/103 (13%)
Query: 90 PHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD--QYPYAASPAAAGYVTAGG 147
PHV TAAAA+ +GAA A S A + + +PY+ + G
Sbjct: 288 PHVGVTAAAAAAAA----SGAAAAASSPFATSIRPLDTFRALSHPYSRPELLCSFRHPGL 343
Query: 148 YGY--------AVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 182
Y + AAA AAA++AAAA A G P
Sbjct: 344 YQAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAP 386
>gi|13491166 pumilio 1 isoform 2 [Homo sapiens]
Length = 1186
Score = 41.2 bits (95), Expect = 5e-04
Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 34/178 (19%)
Query: 31 IDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVY----PQAFVQPG 86
+D A V L ++ ++ Q A VQQL A Q+ AH + P AFV
Sbjct: 369 VDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNP 428
Query: 87 VVI--------PHVQPTAAAAS------------TTPYIDYTGAAYAQYSAAAAAAAAAA 126
+I P+ AAAA+ TP+ Y + + Q +AAAAAA +A
Sbjct: 429 YIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSA 488
Query: 127 AYDQYPYAASPAAAGYVTAGGYGYAVQQPIT-----AAAPGTAAAAAAAAAAAAAFGQ 179
P A V GG A Q+P+T AAAA +A AFGQ
Sbjct: 489 NQQTTPQAQQ--GQQQVLRGG---ASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQ 541
Score = 30.8 bits (68), Expect = 0.74
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 94 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 153
P +AA+T DY A A A Q YA + A ++ + V
Sbjct: 368 PVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAF-VP 426
Query: 154 QP--ITAAAPGTAAAAAAAAAAAAAFGQYQPQQ 184
P I+AA PGT A AAAA P Q
Sbjct: 427 NPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQ 459
Score = 28.1 bits (61), Expect = 4.8
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 110 AAYAQYSAAAAAAAAAAAYDQYPYAASPA----AAGYVTAGGYGYAVQQPITAAAPG--- 162
AA A SA A AA YP A A V G + P+ AP
Sbjct: 529 AAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVI 588
Query: 163 -TAAAAAAAAAAAAA 176
+++AA AA AAAAA
Sbjct: 589 ISSSAAQAAVAAAAA 603
>gi|66932909 pumilio 1 isoform 1 [Homo sapiens]
Length = 1188
Score = 41.2 bits (95), Expect = 5e-04
Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 34/178 (19%)
Query: 31 IDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGIPAHYVY----PQAFVQPG 86
+D A V L ++ ++ Q A VQQL A Q+ AH + P AFV
Sbjct: 369 VDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAFVPNP 428
Query: 87 VVI--------PHVQPTAAAAS------------TTPYIDYTGAAYAQYSAAAAAAAAAA 126
+I P+ AAAA+ TP+ Y + + Q +AAAAAA +A
Sbjct: 429 YIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAAAAAATNSA 488
Query: 127 AYDQYPYAASPAAAGYVTAGGYGYAVQQPIT-----AAAPGTAAAAAAAAAAAAAFGQ 179
P A V GG A Q+P+T AAAA +A AFGQ
Sbjct: 489 NQQTTPQAQQ--GQQQVLRGG---ASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQ 541
Score = 30.8 bits (68), Expect = 0.74
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Query: 94 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 153
P +AA+T DY A A A Q YA + A ++ + V
Sbjct: 368 PVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLAPAAF-VP 426
Query: 154 QP--ITAAAPGTAAAAAAAAAAAAAFGQYQPQQ 184
P I+AA PGT A AAAA P Q
Sbjct: 427 NPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQ 459
Score = 28.1 bits (61), Expect = 4.8
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 110 AAYAQYSAAAAAAAAAAAYDQYPYAASPA----AAGYVTAGGYGYAVQQPITAAAPG--- 162
AA A SA A AA YP A A V G + P+ AP
Sbjct: 529 AAAAVNSALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVI 588
Query: 163 -TAAAAAAAAAAAAA 176
+++AA AA AAAAA
Sbjct: 589 ISSSAAQAAVAAAAA 603
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 44 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 94
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 174 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 232
Query: 95 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 152
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 233 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 289
Query: 153 QQPITAAAPGTAAAAAAAAAAAAA 176
A GT AAAAAAAAAA A
Sbjct: 290 PGIGGIAGVGTPAAAAAAAAAAKA 313
Score = 37.7 bits (86), Expect = 0.006
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 567 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 621
Score = 32.7 bits (73), Expect = 0.20
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 52 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 111
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 405 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 459
Query: 112 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 171
A A A P A G A G G A PG AAAA +A
Sbjct: 460 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 512
Query: 172 AAAAAFGQ 179
A AA Q
Sbjct: 513 AKVAAKAQ 520
Score = 32.3 bits (72), Expect = 0.25
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 141
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 396
Query: 142 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 180
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 397 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 452
Score = 32.0 bits (71), Expect = 0.33
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 27 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 75
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147
Query: 76 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 130
VYP + PGV V+P V PT A P G A+A
Sbjct: 148 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 204
Query: 131 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 175
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 205 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 264
Query: 176 AFG 178
FG
Sbjct: 265 KFG 267
Score = 32.0 bits (71), Expect = 0.33
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 156
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 294 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 353
Query: 157 T-------AAAPGTAA--AAAAAAAAAAAFG 178
AA PG + AAA AAA AA +G
Sbjct: 354 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 384
Score = 30.4 bits (67), Expect = 0.97
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 73 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 129
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 480 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 535
Query: 130 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
V G G V P A PG AAA AA AA G
Sbjct: 536 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 582
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 168
G A +AAAAAA AAA Q+ + A G + GG G P G AAA
Sbjct: 598 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGV----PGVGGLGGIPPAAA 652
Query: 169 AAAAAAAAFG 178
A AA A G
Sbjct: 653 AKAAKYGAAG 662
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 44 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 94
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 179 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
Query: 95 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 152
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 238 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 294
Query: 153 QQPITAAAPGTAAAAAAAAAAAAA 176
A GT AAAAAAAAAA A
Sbjct: 295 PGIGGIAGVGTPAAAAAAAAAAKA 318
Score = 37.7 bits (86), Expect = 0.006
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 591 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 645
Score = 35.8 bits (81), Expect = 0.023
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 52 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 111
PGF GV + P + G+P P PGV I AAAA Y T AA
Sbjct: 410 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 464
Query: 112 YAQYSAAAAAAAAAAAYDQYP-YAASP---AAAGYVTAGGYGYAV---------QQPITA 158
AAA AAA AA + P +P A G A G G A P
Sbjct: 465 -----AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVG 519
Query: 159 AAPGTAAAAAAAAAAAAA 176
APG AAAA +AA
Sbjct: 520 VAPGIGPGGVAAAAKSAA 537
Score = 34.3 bits (77), Expect = 0.067
Identities = 55/170 (32%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 15 ADRAAAERACKDP--NPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGI 72
A AAA +A K P KA A G P + G A GV + G+
Sbjct: 446 AQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV---GVAPGVGVAPGVGVAPGVGL 502
Query: 73 -PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 128
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 503 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGL 558
Query: 129 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
V G G V P A PG AAA AA AA G
Sbjct: 559 GVGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 606
Score = 32.3 bits (72), Expect = 0.25
Identities = 36/121 (29%), Positives = 41/121 (33%), Gaps = 23/121 (19%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVT 144
PG +P V A P GAA + AAA AAA +Y G T
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
Query: 145 AG-------GYGYAVQQ-PITAAAPGTAA---------------AAAAAAAAAAAFGQYQ 181
G G+G V P A PG A AAAAA AA +G
Sbjct: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 461
Query: 182 P 182
P
Sbjct: 462 P 462
Score = 32.0 bits (71), Expect = 0.33
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 156
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
Query: 157 T-------AAAPGTAA--AAAAAAAAAAAFG 178
AA PG + AAA AAA AA +G
Sbjct: 359 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 389
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 132 PYAASPAAAGYVTAGGYGYAVQQPI-TAAAPGTAAAAAAAAAAAAAFG 178
PY GY G G A + T G AAAAAAA AAA FG
Sbjct: 225 PYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFG 272
Score = 28.9 bits (63), Expect = 2.8
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 168
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 622 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 680
Query: 169 AAAAAA 174
AA
Sbjct: 681 KYGVAA 686
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 44 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 94
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 179 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 237
Query: 95 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 152
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 238 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 294
Query: 153 QQPITAAAPGTAAAAAAAAAAAAA 176
A GT AAAAAAAAAA A
Sbjct: 295 PGIGGIAGVGTPAAAAAAAAAAKA 318
Score = 37.7 bits (86), Expect = 0.006
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 572 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 626
Score = 32.7 bits (73), Expect = 0.20
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 52 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 111
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 410 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 464
Query: 112 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 171
A A A P A G A G G A PG AAAA +A
Sbjct: 465 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 517
Query: 172 AAAAAFGQ 179
A AA Q
Sbjct: 518 AKVAAKAQ 525
Score = 32.3 bits (72), Expect = 0.25
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 141
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 342 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 401
Query: 142 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 180
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 402 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 457
Score = 32.0 bits (71), Expect = 0.33
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 156
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 299 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 358
Query: 157 T-------AAAPGTAA--AAAAAAAAAAAFG 178
AA PG + AAA AAA AA +G
Sbjct: 359 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 389
Score = 30.4 bits (67), Expect = 0.97
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 73 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 129
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 485 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 540
Query: 130 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
V G G V P A PG AAA AA AA G
Sbjct: 541 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 587
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 132 PYAASPAAAGYVTAGGYGYAVQQPI-TAAAPGTAAAAAAAAAAAAAFG 178
PY GY G G A + T G AAAAAAA AAA FG
Sbjct: 225 PYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFG 272
Score = 28.9 bits (63), Expect = 2.8
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 168
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 603 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 661
Query: 169 AAAAAA 174
AA
Sbjct: 662 KYGVAA 667
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 44 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 94
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 164 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 222
Query: 95 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 152
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 223 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 279
Query: 153 QQPITAAAPGTAAAAAAAAAAAAA 176
A GT AAAAAAAAAA A
Sbjct: 280 PGIGGIAGVGTPAAAAAAAAAAKA 303
Score = 37.7 bits (86), Expect = 0.006
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 557 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 611
Score = 32.7 bits (73), Expect = 0.20
Identities = 40/128 (31%), Positives = 44/128 (34%), Gaps = 12/128 (9%)
Query: 52 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 111
PGF GV + P + G+P P PGV I AAAA Y G
Sbjct: 395 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVG 449
Query: 112 YAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAA 171
A A A P A G A G G A PG AAAA +A
Sbjct: 450 VAPGVGVAPGVGVAPGVGLAPGVG--VAPGVGVAPGVGVA-----PGIGPGGVAAAAKSA 502
Query: 172 AAAAAFGQ 179
A AA Q
Sbjct: 503 AKVAAKAQ 510
Score = 32.3 bits (72), Expect = 0.25
Identities = 36/116 (31%), Positives = 41/116 (35%), Gaps = 20/116 (17%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAY---AQYSAAAAAAAAAAAYDQYPYAASPAAAG 141
PG +P V A P GAA AAA AAA AA Y P
Sbjct: 327 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 386
Query: 142 Y-VTAGGY-GYAVQQ---------------PITAAAPGTAAAAAAAAAAAAAFGQY 180
Y V AGG+ G+ V P PG + A AAAAA +Y
Sbjct: 387 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKY 442
Score = 32.0 bits (71), Expect = 0.33
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 27 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 75
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 78 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 137
Query: 76 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 130
VYP + PGV V+P V PT A P G A+A
Sbjct: 138 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 194
Query: 131 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 175
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 195 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 254
Query: 176 AFG 178
FG
Sbjct: 255 KFG 257
Score = 32.0 bits (71), Expect = 0.33
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 156
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 284 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 343
Query: 157 T-------AAAPGTAA--AAAAAAAAAAAFG 178
AA PG + AAA AAA AA +G
Sbjct: 344 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 374
Score = 30.4 bits (67), Expect = 0.97
Identities = 38/109 (34%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Query: 73 PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYD 129
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 470 PGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGLG 525
Query: 130 QYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
V G G V P A PG AAA AA AA G
Sbjct: 526 VGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 572
Score = 28.9 bits (63), Expect = 2.8
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 168
G A +AAAAAA AAA Q+ + A G + GG G + P AA AA
Sbjct: 588 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGVPGVGGLGGIPPAAAAKAA 646
Query: 169 AAAAAA 174
AA
Sbjct: 647 KYGVAA 652
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 41.2 bits (95), Expect = 5e-04
Identities = 48/144 (33%), Positives = 59/144 (40%), Gaps = 15/144 (10%)
Query: 44 GAKPRIMQPGFAF-GVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQP-------- 94
G KP+ G AF G+ + P +P G+P Y + G +P+
Sbjct: 174 GVKPKAPGVGGAFAGIPGVGPFGGPQP-GVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGP 232
Query: 95 --TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAV 152
A AA Y TG +AAAAAA AAA + P G G G A+
Sbjct: 233 GGVAGAAGKAGYP--TGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPG-AI 289
Query: 153 QQPITAAAPGTAAAAAAAAAAAAA 176
A GT AAAAAAAAAA A
Sbjct: 290 PGIGGIAGVGTPAAAAAAAAAAKA 313
Score = 37.7 bits (86), Expect = 0.006
Identities = 28/60 (46%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
A AAA AA Y AA P G + A G G + + A P AAAAA AAA AA FG
Sbjct: 586 ALAAAKAAKYG----AAVPGVLGGLGALG-GVGIPGGVVGAGPAAAAAAAKAAAKAAQFG 640
Score = 35.8 bits (81), Expect = 0.023
Identities = 47/138 (34%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 52 PGFAFGVQQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAA 111
PGF GV + P + G+P P PGV I AAAA Y T AA
Sbjct: 405 PGFGVGVGGI-PGVA----GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAA 459
Query: 112 YAQYSAAAAAAAAAAAYDQYP-YAASP---AAAGYVTAGGYGYAV---------QQPITA 158
AAA AAA AA + P +P A G A G G A P
Sbjct: 460 -----AAAKAAAKAAQFGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVG 514
Query: 159 AAPGTAAAAAAAAAAAAA 176
APG AAAA +AA
Sbjct: 515 VAPGIGPGGVAAAAKSAA 532
Score = 34.3 bits (77), Expect = 0.067
Identities = 55/170 (32%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 15 ADRAAAERACKDP--NPIIDGRKANVNLAYLGAKPRIMQPGFAFGVQQLHPALIQRPFGI 72
A AAA +A K P KA A G P + G A GV + G+
Sbjct: 441 AQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV---GVAPGVGVAPGVGVAPGVGL 497
Query: 73 -PAHYVYPQAFVQPGV-VIPHVQP--TAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 128
P V P V PGV V P + P AAAA + + AA AQ AAA A
Sbjct: 498 APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKV----AAKAQLRAAAGLGAGIPGL 553
Query: 129 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG 178
V G G V P A PG AAA AA AA G
Sbjct: 554 GVGVGVPGLGVGAGVPGLGVGAGV--PGFGAVPGALAAAKAAKYGAAVPG 601
Score = 32.3 bits (72), Expect = 0.25
Identities = 36/121 (29%), Positives = 41/121 (33%), Gaps = 23/121 (19%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVT 144
PG +P V A P GAA + AAA AAA +Y G T
Sbjct: 337 PGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPT 396
Query: 145 AG-------GYGYAVQQ-PITAAAPGTAA---------------AAAAAAAAAAAFGQYQ 181
G G+G V P A PG A AAAAA AA +G
Sbjct: 397 YGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGT 456
Query: 182 P 182
P
Sbjct: 457 P 457
Score = 32.0 bits (71), Expect = 0.33
Identities = 53/183 (28%), Positives = 63/183 (34%), Gaps = 34/183 (18%)
Query: 27 PNPIIDGRKANVNLAY--------LGAKPRIMQPGFAFGVQQLHPALIQRPFGIPA---H 75
P ++ G A+ AY LG P + G + G P +P +P
Sbjct: 88 PGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLP 147
Query: 76 YVYPQAFVQ----PGV-VIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQ 130
VYP + PGV V+P V PT A P G A+A
Sbjct: 148 GVYPGGVLPGARFPGVGVLPGV-PTGAGVK--PKAPGVGGAFAGIPGVGPFGGPQPGVPL 204
Query: 131 -YPYAASPAAAGY---VTAGGYGYAVQQPITAAAPGTA-----------AAAAAAAAAAA 175
YP A GY T G Y A A G A AAAAAAA AAA
Sbjct: 205 GYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAA 264
Query: 176 AFG 178
FG
Sbjct: 265 KFG 267
Score = 32.0 bits (71), Expect = 0.33
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 21/91 (23%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAA---------SPAAAGYVTAGGYGYAVQQ---PI 156
G A AAAAAAAAAA +Y AA P G AG G V P+
Sbjct: 294 GIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPV 353
Query: 157 T-------AAAPGTAA--AAAAAAAAAAAFG 178
AA PG + AAA AAA AA +G
Sbjct: 354 VPGAGIPGAAVPGVVSPEAAAKAAAKAAKYG 384
Score = 29.3 bits (64), Expect = 2.2
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 109 GAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAA 168
G A +AAAAAA AAA Q+ + A G + GG G P G AAA
Sbjct: 617 GVVGAGPAAAAAAAKAAAKAAQFGLVGA-AGLGGLGVGGLGV----PGVGGLGGIPPAAA 671
Query: 169 AAAAAAAAFG 178
A AA A G
Sbjct: 672 AKAAKYGAAG 681
>gi|5902108 SRY-box 21 [Homo sapiens]
Length = 276
Score = 41.2 bits (95), Expect = 5e-04
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAA--------- 135
P ++ + + AAAA+ + SAAAAAAAAAAA PY+
Sbjct: 127 PESLLANPEKAAAAAAAA-----AARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAE 181
Query: 136 -SPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 182
S +++G A GY A G AAAAAAAAAAA P
Sbjct: 182 ISSSSSGLPYASSLGYPTAG--AGAFHGAAAAAAAAAAAAGGHTHSHP 227
Score = 40.8 bits (94), Expect = 7e-04
Identities = 44/125 (35%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 62 HPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAA 121
HPAL G H V ++ + AAAA+ + + +A +AAAAA
Sbjct: 108 HPAL---KAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSA----AAAAAA 160
Query: 122 AAAAAAYDQYPY--------AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAA 173
AAAAAA Y S +++G A GY P A AAAAAAAAA
Sbjct: 161 AAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGY----PTAGAGAFHGAAAAAAAAA 216
Query: 174 AAAFG 178
AAA G
Sbjct: 217 AAAGG 221
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 40.8 bits (94), Expect = 7e-04
Identities = 51/168 (30%), Positives = 61/168 (36%), Gaps = 33/168 (19%)
Query: 47 PRIMQPGFAFGV-QQLHPALIQRPFGIPAHYVYPQAFVQP-------------------- 85
P I P FG+ Q+L P L P+G P + P
Sbjct: 329 PVIPVPSKGFGLLQKLPPPLFPHPYGFPTAFGLCPKKDDPVLGAGEPKGGPGTGSGGGGA 388
Query: 86 -------GVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP-YAASP 137
G H+ P A A + + AAA AAAAAA YP +
Sbjct: 389 GTGGGAGGPGASHLPPGAGAGPGGGAMFWGHQPSGAAKDAAAVAAAAAAATVYPTFPMFW 448
Query: 138 AAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQL 185
AAG + Y A Q AA A AAAAAAAAAA G P+ L
Sbjct: 449 PAAGSLPVPSYPAAQSQAKAVAA----AVAAAAAAAAAAAGSGAPEPL 492
>gi|6912372 forkhead box D3 [Homo sapiens]
Length = 478
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/96 (39%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 96 AAAASTTPYIDYTGAAYAQYS-AAAAAAAAAAAYDQYPYAASPA------AAGYVTAGGY 148
AA PY + AA YS AAAAAAAAAA QYPYA P A + +G
Sbjct: 267 AAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGEL 326
Query: 149 GYAVQQPITAAAPG------TAAAAAAAAAAAAAFG 178
G + PG + AAAAAA A A G
Sbjct: 327 GRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAG 362
Score = 32.7 bits (73), Expect = 0.20
Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 21/70 (30%)
Query: 111 AYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAA 170
++ YS AAAA AA Y + PY PAAA AG Y + AAAA
Sbjct: 255 SFGAYSLAAAAGAAGP-YGR-PYGLHPAAA----AGAYSHP---------------AAAA 293
Query: 171 AAAAAAFGQY 180
AAAAAA QY
Sbjct: 294 AAAAAAALQY 303
Score = 27.3 bits (59), Expect = 8.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 76 YVYPQAFVQPGVVIPHVQPTAAAASTT---PYIDYT-GAAYAQYSAAAAAAAAAAAYDQY 131
++ P VQ ++ QP + + +T P + + Q +A+AAAAAAAAA ++
Sbjct: 416 FLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKW 475
Query: 132 P 132
P
Sbjct: 476 P 476
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 26/98 (26%)
Query: 107 YTGAAYAQYSAAAAAAAAAAAYDQYPYAAS----PAAAGYVTAGGYGYAVQQ-------- 154
+ AA A +AAAAAAAAAAA Y +A+ AAAG G Y ++
Sbjct: 222 HPAAAAAAAAAAAAAAAAAAAAAYYQVSAAGPQPKAAAGAGGPGSLSYRCKRKRGGAKDC 281
Query: 155 --------------PITAAAPGTAAAAAAAAAAAAAFG 178
P + A AAAAAAAAAAAAA G
Sbjct: 282 LLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAG 319
Score = 37.4 bits (85), Expect = 0.008
Identities = 39/95 (41%), Positives = 42/95 (44%), Gaps = 30/95 (31%)
Query: 110 AAYAQYSAAAAAAAAAAAYDQYPYAASP---AAAGYVTAGGYGYAVQQP----------- 155
AA A +AAAAAAAAAAAY Q AA P AAAG G Y ++
Sbjct: 227 AAAAAAAAAAAAAAAAAAYYQVS-AAGPQPKAAAGAGGPGSLSYRCKRKRGGAKDCLLAP 285
Query: 156 ---------------ITAAAPGTAAAAAAAAAAAA 175
AAA AAAAAAAAAA A
Sbjct: 286 HAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGA 320
Score = 34.7 bits (78), Expect = 0.051
Identities = 44/142 (30%), Positives = 56/142 (39%), Gaps = 26/142 (18%)
Query: 45 AKPRIMQPGFAFGVQQLHPAL--IQRPFGIPAHYVYP-QAFVQPGVVIPHVQPTAAAAST 101
A PR PGF QL L RP I A P A +P +P +
Sbjct: 125 ASPR---PGFWKDKHQLWRGLSGAARPLPISAQSQRPGAAAARPAAHLPQI--------- 172
Query: 102 TPYIDYTGAAYAQYSAAAAAAAAAAAYDQYP----YAASPAAAGYVTAGGYGYAVQQPIT 157
+ Y G+ Y + + Y+ P Y A P+ Y + + P
Sbjct: 173 --FSKYPGSHYPEI--VRSPCKPPLNYETAPLQGNYVAFPSDPAYFRSL---LCSKHPAA 225
Query: 158 AAAPGTAAAAAAAAAAAAAFGQ 179
AAA AAAAAAAAAAAAA+ Q
Sbjct: 226 AAAAAAAAAAAAAAAAAAAYYQ 247
Score = 32.3 bits (72), Expect = 0.25
Identities = 18/24 (75%), Positives = 18/24 (75%)
Query: 158 AAAPGTAAAAAAAAAAAAAFGQYQ 181
AAA AAAAAAAAAAAAA YQ
Sbjct: 224 AAAAAAAAAAAAAAAAAAAAAYYQ 247
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 39.3 bits (90), Expect = 0.002
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 95 TAAAASTTPYIDYTGAAYAQYSAAAAAA--AAAAAYDQYPYAASPA-AAGYVTAGGYGYA 151
T AAS+ A+Y SAA++ A A AA+Y+ P A+ A +A Y Y+
Sbjct: 367 TQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYS 426
Query: 152 VQQPITAAAPGTAAAAAAAAAAAAA 176
Q A P TAAA A+ AA AA
Sbjct: 427 SQPAAYVAQPATAAAYASQPAAYAA 451
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 91 HVQPTAAA-ASTTPYIDYTGAAYAQYSAA-AAAAAAAAAYDQYPYAASPAAAGYVTAGGY 148
+ QP+A+ A + PY A+Y+ AA A A AAAY P AA A A AG Y
Sbjct: 403 NAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQP-AAYAAQATTPMAGSY 461
Query: 149 GYAVQQPITAAAPGTAAAAAA--------AAAAAAAFGQY 180
G QP+ + A A+ A +AAAA G Y
Sbjct: 462 G---AQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSY 498
Score = 36.6 bits (83), Expect = 0.014
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 79 PQAFV-QPGVVIPHV-QPTA-AAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAA 135
P A+V QP + QP A AA +TTP GA + + A A+ Y A
Sbjct: 429 PAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGA 488
Query: 136 SPAAAGYVTAGGYG----YAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQPQQLQTDRMQ 191
AAA G YG Y Q T AAP ++A+ AA+ AA Q PQ + R Q
Sbjct: 489 QSAAAA---TGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAA--QQHPQAAASYRGQ 543
Score = 31.2 bits (69), Expect = 0.57
Identities = 54/196 (27%), Positives = 76/196 (38%), Gaps = 30/196 (15%)
Query: 10 AKVTMADRAAAERACKDPN-PIIDGRKANVNLAYLGAKPRIMQPGFAF--GVQQLHPALI 66
A V M A A+ A N + G++ NV L+ G K PG A G + P
Sbjct: 115 AFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKG---PGLAVQSGDKTKKPGAG 171
Query: 67 QRPF----GIPAHYVYPQAFVQP--GVVIPHVQPT--------AAAASTTPYIDYTGAAY 112
F G A + Y QAF G QPT + + P Y
Sbjct: 172 DTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLT 231
Query: 113 AQYSA--AAAAAAAAAAYDQYPYAASPAAAGY----VTAGGYGYAVQQPITAAAP--GTA 164
AQ + A + + AAY P A+ GY +TA Y Q ++ AP G
Sbjct: 232 AQPATYRAQPSVSLGAAYRAQPSAS--LGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQL 289
Query: 165 AAAAAAAAAAAAFGQY 180
A+ ++ +AAA++ G Y
Sbjct: 290 ASPSSQSAAASSLGPY 305
Score = 31.2 bits (69), Expect = 0.57
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 95 TAAAASTTPY--IDYTGAAYAQYSAAAAAAAAAAAYDQY-----PYAASPAAAGYVTAGG 147
+AAA+S PY + +A + Y AAAA++ +Y Y P++ G A
Sbjct: 296 SAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASS 355
Query: 148 YGYAVQQPITAAA-----PGTAAAAAAAAAAAAAFG 178
YG + AAA G A++ + A AA++G
Sbjct: 356 YG------VRAAASSYNTQGAASSLGSYGAQAASYG 385
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 38.9 bits (89), Expect = 0.003
Identities = 38/108 (35%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 69 PFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAY 128
P +PA V P A P + V P AA S + A +A+ AA A AA
Sbjct: 142 PAAVPAA-VRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVC 200
Query: 129 DQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
P AA P+AA A AAA A AAAA AAAA
Sbjct: 201 ---PGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAA 245
Score = 36.2 bits (82), Expect = 0.018
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 64 ALIQRPFGIPAHYVYPQA---FVQPGVVIPHVQPTAAAA--STTPYIDYTGAAYAQYSAA 118
A+ RP PA P A P V P +AA+ + +P A A
Sbjct: 93 AVAWRPAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPP 152
Query: 119 AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAA 176
AA AAA YP AA P+AA A AV + AA AA AA +AA
Sbjct: 153 AAGPPAAALAAVYPAAADPSAASLCAASPLA-AVPAAASPAAVAPAAVCPGAAGPSAA 209
Score = 32.7 bits (73), Expect = 0.20
Identities = 39/118 (33%), Positives = 47/118 (39%), Gaps = 20/118 (16%)
Query: 63 PALIQRPF-GIPAHY---VYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA 118
PA ++ P G PA VYP A + P AA + AA +A
Sbjct: 146 PAAVRPPAAGPPAAALAAVYPAAADPSAASLCAASPLAAVPAAASPAAVAPAAVCPGAAG 205
Query: 119 AAAAAAAAAYDQ--YPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAA 174
+AA+ AA P AASPAAA + A P AA AAAA AAA
Sbjct: 206 PSAASLCAASQPAAVPAAASPAAAAPL--------------AVNPAAAARAAAAPAAA 249
Score = 29.3 bits (64), Expect = 2.2
Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 85 PGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA---AAAAAAAAAYDQYPYAASPAAAG 141
P +P AA A G + A AA AA AAA+ P A +PAAA
Sbjct: 181 PLAAVPAAASPAAVAPAAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLAVNPAAAA 240
Query: 142 YVTAGGYGYAVQQPITAAAPGTAAAAA 168
A VQ A +P T A A
Sbjct: 241 RAAAAPAAACVQS--VAESPATPLAIA 265
>gi|148746211 NK2 transcription factor related, locus 3 [Homo
sapiens]
Length = 364
Score = 38.5 bits (88), Expect = 0.004
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 94 PTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQ 153
P + AS Y + Y SAAAAAAAAAAA Y++S A GG G
Sbjct: 249 PYSVGASAYSYNSFPAYGYGN-SAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGGTS 307
Query: 154 QPITAAAPGTAAAAAAAAAAAAAFGQY 180
TA P +AA + G +
Sbjct: 308 AATTAMQPACSAAGGGPFVNVSNLGGF 334
Score = 35.4 bits (80), Expect = 0.030
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 124 AAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFGQYQP 182
+A AY PY+ +A Y + YGY AAA AAAAAAAAA ++++G P
Sbjct: 242 SAQAYGA-PYSVGASAYSYNSFPAYGYGNS---AAAAAAAAAAAAAAAAYSSSYGCAYP 296
Score = 27.3 bits (59), Expect = 8.2
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 115 YSAAAAAAAAAAAYDQYP---YAASPAAAGYVTA---------GGYGYAVQQPITAAAPG 162
Y A + A+A +Y+ +P Y S AAA A YG A G
Sbjct: 246 YGAPYSVGASAYSYNSFPAYGYGNSAAAAAAAAAAAAAAAAYSSSYGCAYPAGGGGGGGG 305
Query: 163 TAAAAAAAAAAAAAFG 178
T+AA A A +A G
Sbjct: 306 TSAATTAMQPACSAAG 321
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.129 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,385,851
Number of Sequences: 37866
Number of extensions: 343492
Number of successful extensions: 6953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 3194
Number of HSP's gapped (non-prelim): 1901
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.