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Search of human proteins with 22749337
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749337 THAP domain containing 8 [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749337 THAP domain containing 8 [Homo sapiens] 569 e-162
gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens] 103 2e-22
gi|31982895 THAP domain containing 4 [Homo sapiens] 77 2e-14
gi|8922446 THAP domain containing, apoptosis associated protein ... 67 1e-11
gi|42734379 THAP domain containing, apoptosis associated protein... 65 6e-11
gi|13899259 THAP domain containing, apoptosis associated protein... 62 5e-10
gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens] 62 5e-10
gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens] 61 1e-09
gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens] 61 1e-09
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 43 3e-04
gi|47132519 Ras association and pleckstrin homology domains 1 is... 42 4e-04
gi|19923268 protein-kinase, interferon-inducible double stranded... 42 4e-04
gi|19111150 angiomotin isoform 2 [Homo sapiens] 42 6e-04
gi|166064029 angiomotin isoform 1 [Homo sapiens] 42 6e-04
gi|94536788 THAP domain containing 9 [Homo sapiens] 41 0.001
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 41 0.001
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 40 0.002
gi|19924099 synapsin I isoform Ia [Homo sapiens] 40 0.002
gi|19924097 synapsin I isoform Ib [Homo sapiens] 40 0.002
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 40 0.003
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 39 0.004
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 39 0.004
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 39 0.004
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 39 0.004
>gi|22749337 THAP domain containing 8 [Homo sapiens]
Length = 274
Score = 569 bits (1466), Expect = e-162
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE
Sbjct: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
Query: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSP 120
HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSP
Sbjct: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSP 120
Query: 121 AIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGAL 180
AIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGAL
Sbjct: 121 AIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGAL 180
Query: 181 QRRVRRLQRCQERHQAQLQALERLAQQLHGESLLARARRGLQRLTTAQTLGPEESQTFTI 240
QRRVRRLQRCQERHQAQLQALERLAQQLHGESLLARARRGLQRLTTAQTLGPEESQTFTI
Sbjct: 181 QRRVRRLQRCQERHQAQLQALERLAQQLHGESLLARARRGLQRLTTAQTLGPEESQTFTI 240
Query: 241 ICGGPDIAMVLAQDPAPATVDAKPELLDTRIPSA 274
ICGGPDIAMVLAQDPAPATVDAKPELLDTRIPSA
Sbjct: 241 ICGGPDIAMVLAQDPAPATVDAKPELLDTRIPSA 274
>gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
Length = 395
Score = 103 bits (257), Expect = 2e-22
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
MP+YC A C N GR D R +SFY FPL D RL+ WL++M + WVPS +Q LCS+
Sbjct: 1 MPRYCAAICCKNRRGRNNKD-RKLSFYPFPLHDKERLEKWLKNMKRDSWVPSKYQFLCSD 59
Query: 61 HFTPSCFQWRWGVRYLRPDAVPSIFS-------RGP-PAKSQRRTRSTQKPVSP 106
HFTP RWG+RYL+ AVP+IFS + P KSQ++ +K V P
Sbjct: 60 HFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCP 113
>gi|31982895 THAP domain containing 4 [Homo sapiens]
Length = 577
Score = 77.0 bits (188), Expect = 2e-14
Identities = 44/105 (41%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 5 CRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSEHFTP 64
C A NCSN G+ + R VSF++FPLKD RL WL+ + ++W P+ + LCSEHFT
Sbjct: 5 CAAVNCSNRQGK--GEKRAVSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTK 62
Query: 65 SCFQWRW--GVRYLRPDAVPSIF-----SRGPPAKSQRRTRSTQK 102
F R R L+P AVPSIF RG + R + K
Sbjct: 63 DSFSKRLEDQHRLLKPTAVPSIFHLTEKKRGAGGHGRTRRKDASK 107
>gi|8922446 THAP domain containing, apoptosis associated protein 1
isoform 1 [Homo sapiens]
Length = 213
Score = 67.4 bits (163), Expect = 1e-11
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
M + C A C N + ++PVSF+KFPL + W + +++ P+ + +CSE
Sbjct: 1 MVQSCSAYGCKNRYDK----DKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSE 56
Query: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSP 120
HFTP CF+ + L+ +AVP+IF P + Q+ + PPPPL P+ Q
Sbjct: 57 HFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDLLEPQEQL-PPPPLP--PPVSQVD 113
Query: 121 AI------PVSGPVRLVV 132
A P+ PV L V
Sbjct: 114 AAIGLLMPPLQTPVNLSV 131
>gi|42734379 THAP domain containing, apoptosis associated protein 3
[Homo sapiens]
Length = 175
Score = 65.1 bits (157), Expect = 6e-11
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
MPK C A C N R + + ++F++FP L+ W+ ++G ++ P H +CSE
Sbjct: 1 MPKSCAARQCCN---RYSSRRKQLTFHRFPFSRPELLKEWVLNIGRGNFKPKQHTVICSE 57
Query: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLP-QS 119
HF P CF + L+ +AVP++F+ P + R QK P +S
Sbjct: 58 HFRPECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASERGNASSSQKEKTSPCRS 117
Query: 120 PAIPVSG 126
+P +G
Sbjct: 118 QVLPEAG 124
>gi|13899259 THAP domain containing, apoptosis associated protein
2 [Homo sapiens]
Length = 228
Score = 62.0 bits (149), Expect = 5e-10
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGCEHWVPSCHQHLCSE 60
MP C A C+ T + + +SF++FPL D R + W++ + +++VP H LCS+
Sbjct: 1 MPTNCAAAGCATTYNK----HINISFHRFPL-DPKRRKEWVRLVRRKNFVPGKHTFLCSK 55
Query: 61 HFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQR 95
HF SCF R L+ DAVP+IF KS +
Sbjct: 56 HFEASCFDLTGQTRRLKMDAVPTIFDFCTHIKSMK 90
>gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
Length = 353
Score = 62.0 bits (149), Expect = 5e-10
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 47 EHWVPSCHQHLCSEHFTPSCFQWRWGVRYLRPDAVPSIFS-------RGP-PAKSQRRTR 98
+ WVPS +Q LCS+HFTP RWG+RYL+ AVP+IFS + P KSQ++
Sbjct: 4 DSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNL 63
Query: 99 STQKPVSP 106
+K V P
Sbjct: 64 EDEKEVCP 71
>gi|56788351 THAP domain containing 7 isoform 2 [Homo sapiens]
Length = 309
Score = 60.8 bits (146), Expect = 1e-09
Identities = 76/280 (27%), Positives = 106/280 (37%), Gaps = 56/280 (20%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQH------MGCEHWVP-SC 53
MP++C A C R NR +SF++ P KD PR WL + G W P S
Sbjct: 1 MPRHCSAAGCCTRDTR-ETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASE 59
Query: 54 HQHLCSEHFTPSCFQWRW--GVRYLRPDAVPSIFSR-----------------GPPAKSQ 94
+ + CS+HF CF+ G L+ AVP+IF GP S+
Sbjct: 60 YIYFCSKHFEEDCFELVGISGYHRLKEGAVPTIFESFSKLRRTTKTKGHSYPPGPAEVSR 119
Query: 95 RRT--------RSTQKPVSPPPPLQKNT-PLPQSPA---IPVSGPVRLV---------VL 133
R R P SPPPP P+ ++ A +P S RL +L
Sbjct: 120 LRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPAGRLEPGLSSPFSDLL 179
Query: 134 GPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRVRRLQ----- 188
GP P+P +P P+ L P GA + Q
Sbjct: 180 GPLGAQADEAGCSAQPSPERQPSPLEPRPVSPSAY-MLRLPPPAGAYIQNEHSYQVGSAL 238
Query: 189 RCQERHQAQLQALERLAQQLHGESLLARARRGLQRLTTAQ 228
+ R +A L AL++ +QL ++ R +R RLT Q
Sbjct: 239 LWKRRAEAALDALDKAQRQL--QACKRREQRLRLRLTKLQ 276
>gi|56788349 THAP domain containing 7 isoform 1 [Homo sapiens]
Length = 309
Score = 60.8 bits (146), Expect = 1e-09
Identities = 76/280 (27%), Positives = 106/280 (37%), Gaps = 56/280 (20%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQH------MGCEHWVP-SC 53
MP++C A C R NR +SF++ P KD PR WL + G W P S
Sbjct: 1 MPRHCSAAGCCTRDTR-ETRNRGISFHRLPKKDNPRRGLWLANCQRLDPSGQGLWDPASE 59
Query: 54 HQHLCSEHFTPSCFQWRW--GVRYLRPDAVPSIFSR-----------------GPPAKSQ 94
+ + CS+HF CF+ G L+ AVP+IF GP S+
Sbjct: 60 YIYFCSKHFEEDCFELVGISGYHRLKEGAVPTIFESFSKLRRTTKTKGHSYPPGPAEVSR 119
Query: 95 RRT--------RSTQKPVSPPPPLQKNT-PLPQSPA---IPVSGPVRLV---------VL 133
R R P SPPPP P+ ++ A +P S RL +L
Sbjct: 120 LRRCRKRCSEGRGPTTPFSPPPPADVTCFPVEEASAPATLPASPAGRLEPGLSSPFSDLL 179
Query: 134 GPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRVRRLQ----- 188
GP P+P +P P+ L P GA + Q
Sbjct: 180 GPLGAQADEAGCSAQPSPERQPSPLEPRPVSPSAY-MLRLPPPAGAYIQNEHSYQVGSAL 238
Query: 189 RCQERHQAQLQALERLAQQLHGESLLARARRGLQRLTTAQ 228
+ R +A L AL++ +QL ++ R +R RLT Q
Sbjct: 239 LWKRRAEAALDALDKAQRQL--QACKRREQRLRLRLTKLQ 276
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 3e-04
Identities = 43/136 (31%), Positives = 55/136 (40%), Gaps = 19/136 (13%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P P + GP A + T + QK + P P P P PA+P P V+ P +
Sbjct: 277 PGGPPKPWPEGPMANAAAPTSTPQKLIPPQP---TGRPSPAPPAVP---PAASPVMPPQT 330
Query: 138 GSPKTVATMLLTPLAPAPTP--ERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
SP P PAP + Q + Q GL PV LQ R RL Q R
Sbjct: 331 QSPG-------QPAQPAPMVPLHQKQSRITPIQKPRGLDPV-EILQEREYRL---QARIA 379
Query: 196 AQLQALERLAQQLHGE 211
++Q LE L L G+
Sbjct: 380 HRIQELENLPGSLAGD 395
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 42.4 bits (98), Expect = 4e-04
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 80 AVPSIFSRGPPAKSQRRTRSTQ-KPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSG 138
++P + PP K + TQ P +PPPP PLP P + P LV + P
Sbjct: 736 SLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLP-----PQAPPKPLVTI-PAPT 789
Query: 139 SPKTVATMLLTPLAPAPT----PERSQPEVPA 166
S KTVA ++ P PT P + QP PA
Sbjct: 790 STKTVAPVVTQAAPPTPTPPVPPAKKQPAFPA 821
Score = 32.3 bits (72), Expect = 0.46
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 12/90 (13%)
Query: 83 SIFSRGPPA-----KSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSG--PVRLVVLGP 135
++ + PPA K Q + P PPPP + + P P PV P P
Sbjct: 889 NVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASP 948
Query: 136 T---SGSP--KTVATMLLTPLAPAPTPERS 160
T SGSP KT T P PTP+R+
Sbjct: 949 TPDKSGSPGKKTSKTSSPGGKKPPPTPQRN 978
Score = 29.6 bits (65), Expect = 3.0
Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
Query: 89 PPAKSQRRTRSTQKPVSPPPP--------LQKNTPL----PQSPAIPVSGPVRLVVLG-P 135
PPAK Q ++ P SPP P L K P SP PV V+ + P
Sbjct: 811 PPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFP 870
Query: 136 TSGSPKTVATMLLTPLAPAPTPERSQPEVPAQ 167
+P + + L P+ PA +S P V A+
Sbjct: 871 PPPTPPAMESQPLKPV-PANVAPQSPPAVKAK 901
Score = 28.5 bits (62), Expect = 6.6
Identities = 24/94 (25%), Positives = 29/94 (30%)
Query: 76 LRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGP 135
L P A P P S + +PP P P + PA P S P
Sbjct: 773 LPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPTPP 832
Query: 136 TSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQA 169
P T+ P P+P P V Q A
Sbjct: 833 VPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIA 866
>gi|19923268 protein-kinase, interferon-inducible double stranded
RNA dependent inhibitor, repressor of (P58 repressor)
[Homo sapiens]
Length = 761
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQH---MGCEHWVP---SCH 54
MP +C APNC+ + ++F++FP +D R Q W+++ E P + H
Sbjct: 1 MPNFCAAPNCTRK-----STQSDLAFFRFP-RDPARCQKWVENCRRADLEDKTPDQLNKH 54
Query: 55 QHLCSEHFTPSCFQWRWGVR-YLRPDAVPSIF 85
LC++HF S R LR +A+P+IF
Sbjct: 55 YRLCAKHFETSMICRTSPYRTVLRDNAIPTIF 86
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 42.0 bits (97), Expect = 6e-04
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 80 AVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGS 139
A S+ S A S + Q V+P P P+P +PV P P
Sbjct: 540 AAASVASAAAVAPSAAAAAAVQ--VAPAAP----APVPAPALVPVPAPAAAQASAPAQTQ 593
Query: 140 PKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGP 175
T A + AP PTP +Q EVPA A TG GP
Sbjct: 594 APTSAPAVAPTPAPTPTPAVAQAEVPASPA-TGPGP 628
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 42.0 bits (97), Expect = 6e-04
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 80 AVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGS 139
A S+ S A S + Q V+P P P+P +PV P P
Sbjct: 949 AAASVASAAAVAPSAAAAAAVQ--VAPAAP----APVPAPALVPVPAPAAAQASAPAQTQ 1002
Query: 140 PKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGP 175
T A + AP PTP +Q EVPA A TG GP
Sbjct: 1003 APTSAPAVAPTPAPTPTPAVAQAEVPASPA-TGPGP 1037
>gi|94536788 THAP domain containing 9 [Homo sapiens]
Length = 903
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 1 MPKYCRAPNCSNTAGRLGADNRPVSFYKFPLKDGPRLQAWLQHMGC------EHWVPSCH 54
M + C A CS T + + R +SF++FP D + W++ + + W+P
Sbjct: 1 MTRSCSAVGCS-TRDTVLSRERGLSFHQFPT-DTIQRSKWIRAVNRVDPRSKKIWIPGPG 58
Query: 55 QHLCSEHFTPSCFQWRWGVRYLRPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPP 109
LCS+HF S F+ R L+ AVPS+ P + ++ QK + P P
Sbjct: 59 AILCSKHFQESDFESYGIRRKLKKGAVPSVSLYKIPQGVHLKGKARQKILKQPLP 113
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 13/163 (7%)
Query: 77 RPDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQ-SPAIPVSGPVRLVVLGP 135
+ +A S + GP KSQ + R++ + S P +P P +PA P P
Sbjct: 511 KEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQ-------P 563
Query: 136 TSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
+ +P T A +L +P APAP S+P + L A +RR R QR +E +
Sbjct: 564 PAETP-TDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR--LLAEKRRQAREQREREEQE 620
Query: 196 AQLQAL--ERLAQQLHGESLLARARRGLQRLTTAQTLGPEESQ 236
+LQA +R+ ++ ARA R + + E++Q
Sbjct: 621 RRLQAERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQ 663
Score = 31.2 bits (69), Expect = 1.0
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 80 AVPSIFSRGPPAKSQRRTRSTQKPVSPPPP---LQKNTPLPQSPAIPVSGPVRLVVLGPT 136
A P++ +R PP + R P PPPP L +TP PA+ + + + L P
Sbjct: 13 APPAVVARTPP---EPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPE 69
Query: 137 SGSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRVRRLQR 189
S S + P P Q E P+ +A++ GP A+ R R R
Sbjct: 70 SPSGQV-----------GPRPAPPQEESPSSEAKS-RGPTPPAMGPRDARPPR 110
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 77 RPDAVPSIFSRGPPAKSQRRTRSTQKPVS------PPPPLQKNTPLPQSPAIPVSGPVRL 130
R P S PPA++ Q PV PP P + P SP+ P P R
Sbjct: 340 RHSPAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPSPVPQRR 399
Query: 131 VVLGPTSGSPKTVATMLLTPLAPAPTPERSQPEVPAQQ 168
+ P+ SP + P PAP P P P ++
Sbjct: 400 SPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPPGER 437
Score = 33.9 bits (76), Expect = 0.16
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 93 SQRRTRSTQKPVSPPPPLQKNTPLP--QSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTP 150
SQR + + Q P SP PP + P P QSP PV P SP+ + +P
Sbjct: 338 SQRHSPAPQCP-SPSPPARAAPPCPPCQSPVPQRRSPV------PPCPSPQQRRSPA-SP 389
Query: 151 LAPAPTPERSQPEVPAQQA 169
P+P P+R P P+ Q+
Sbjct: 390 SCPSPVPQRRSPVPPSCQS 408
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/82 (39%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 88 GPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATML 147
GPPA+ QR P P P ++ PL Q P P G L LGP +GSP
Sbjct: 454 GPPAQ-QRPPPQGGPPQPGPGPQRQGPPLQQRP--PPQGQQHLSGLGPPAGSP------- 503
Query: 148 LTPLAPAPTPERSQPEVPAQQA 169
L P+PT S P+ PA QA
Sbjct: 504 LPQRLPSPT---SAPQQPASQA 522
Score = 28.9 bits (63), Expect = 5.1
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 88 GPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS---GSPKTVA 144
GP ++ T +P P P + L Q P+ V P GP +++
Sbjct: 608 GPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLT 667
Query: 145 TMLLTPLAPAPTPERSQPEVPAQ 167
P P P SQ EV A+
Sbjct: 668 NAFNLPEPAPPRPSLSQDEVKAE 690
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 40.0 bits (92), Expect = 0.002
Identities = 32/82 (39%), Positives = 38/82 (46%), Gaps = 13/82 (15%)
Query: 88 GPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATML 147
GPPA+ QR P P P ++ PL Q P P G L LGP +GSP
Sbjct: 454 GPPAQ-QRPPPQGGPPQPGPGPQRQGPPLQQRP--PPQGQQHLSGLGPPAGSP------- 503
Query: 148 LTPLAPAPTPERSQPEVPAQQA 169
L P+PT S P+ PA QA
Sbjct: 504 LPQRLPSPT---SAPQQPASQA 522
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 39.7 bits (91), Expect = 0.003
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPP--PLQKNTPLPQSPAIPVSGPVRLVVLGP 135
P +VP++ S P S + P S PP P+ + P P ++PVS P ++ P
Sbjct: 262 PPSVPTLISDSNPL-SVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAP 320
Query: 136 TSGSPKTVATMLLTPLAP---APTPERSQPEVPA 166
P + T++L P+ AP P + P PA
Sbjct: 321 V---PPSAPTLVLAPVPTPVLAPMPASTPPAAPA 351
Score = 37.0 bits (84), Expect = 0.019
Identities = 25/78 (32%), Positives = 27/78 (34%)
Query: 88 GPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATML 147
GP S PVS PP P+P S V PV VL P S A
Sbjct: 293 GPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAP 352
Query: 148 LTPLAPAPTPERSQPEVP 165
+ P PTP P P
Sbjct: 353 PSVPMPTPTPSSGPPSTP 370
Score = 31.6 bits (70), Expect = 0.78
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
Query: 89 PPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKT---VAT 145
PP+ PV P P P P++P+ P P+SG P T +
Sbjct: 322 PPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPT------PSSGPPSTPTLIPA 375
Query: 146 MLLTPLAPAPTP 157
TP+ PAPTP
Sbjct: 376 FAPTPV-PAPTP 386
Score = 30.8 bits (68), Expect = 1.3
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 103 PVSPPPPLQKNTP--LPQSPAIPVSGPVRLVVLGPTSGS-PKTVATMLLTP---LAPAPT 156
P+ PP P + P +P + +P+S P + P SG P VAT + P LAP P
Sbjct: 202 PICPPAPGSASVPHSVPDAFQVPLSVPAPV----PHSGLVPVQVATSVPAPSPPLAPVPA 257
Query: 157 PERSQPEVP 165
+ P VP
Sbjct: 258 LAPAPPSVP 266
Score = 30.0 bits (66), Expect = 2.3
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P + P++ P ++ P +P PP P P + P S P + PT
Sbjct: 322 PPSAPTLVLAPVPTPVLAPMPASTPPAAPAPP-SVPMPTPTPSSGPPSTPTLIPAFAPTP 380
Query: 138 GSPKTVATMLLTPLAPAPTPERSQPEVP 165
P + TP AP P P + +P
Sbjct: 381 -VPAPTPAPIFTP-APTPMPAATPAAIP 406
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 103 PVSPPPPLQ----KNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPE 158
P S PPP+ P P A PV+ PV + VL P A APAP P
Sbjct: 133 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 192
Query: 159 RSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQA 200
+ PA P A ++ + QR QE QL +
Sbjct: 193 PAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHS 233
Score = 33.1 bits (74), Expect = 0.27
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 105 SPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPL-APAPTPERSQPE 163
S P P +TP P P P V P + +P VA + P APAP P +
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVA-APVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 164 VPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQ-ALERLAQQLH 209
PA P Q E+ Q Q E LA QLH
Sbjct: 186 APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 103 PVSPPPPLQ----KNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPE 158
P S PPP+ P P A PV+ PV + VL P A APAP P
Sbjct: 133 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 192
Query: 159 RSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQA 200
+ PA P A ++ + QR QE QL +
Sbjct: 193 PAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHS 233
Score = 33.1 bits (74), Expect = 0.27
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 105 SPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPL-APAPTPERSQPE 163
S P P +TP P P P V P + +P VA + P APAP P +
Sbjct: 127 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVA-APVAVAVLAPAPAPAPAPAPAPAPVA 185
Query: 164 VPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQ-ALERLAQQLH 209
PA P Q E+ Q Q E LA QLH
Sbjct: 186 APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 232
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 103 PVSPPPPLQ----KNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPLAPAPTPE 158
P S PPP+ P P A PV+ PV + VL P A APAP P
Sbjct: 144 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 203
Query: 159 RSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQA 200
+ PA P A ++ + QR QE QL +
Sbjct: 204 PAPAPAPAPAPAPDAAPQESA-EQGANQGQRGQEPLADQLHS 244
Score = 33.1 bits (74), Expect = 0.27
Identities = 32/107 (29%), Positives = 38/107 (35%), Gaps = 3/107 (2%)
Query: 105 SPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTSGSPKTVATMLLTPL-APAPTPERSQPE 163
S P P +TP P P P V P + +P VA + P APAP P +
Sbjct: 138 SVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVA-APVAVAVLAPAPAPAPAPAPAPAPVA 196
Query: 164 VPAQQAQTGLGPVLGALQRRVRRLQRCQERHQAQLQ-ALERLAQQLH 209
PA P Q E+ Q Q E LA QLH
Sbjct: 197 APAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLH 243
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 39.3 bits (90), Expect = 0.004
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 19/107 (17%)
Query: 78 PDAVPSIFSRGPPAKSQRRTRSTQKPVSPPPPLQKNTPLPQSPAIPVSGPVRLVVLGPTS 137
P + PS F +G PA S TQ+ + P PP +N PLPQ PVS P R ++ +
Sbjct: 428 PASSPSSFQQGSPASSP-TVNQTQQQMGPRPP--QNNPLPQGFQQPVSSPGRNPMVQQGN 484
Query: 138 GSPKTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRV 184
P + + P Q L P LG + +R+
Sbjct: 485 VPPNFMV----------------MQQQPPNQGPQSLHPGLGGMPKRL 515
Score = 29.3 bits (64), Expect = 3.9
Identities = 44/187 (23%), Positives = 66/187 (35%), Gaps = 38/187 (20%)
Query: 89 PPAKSQRRTRSTQKPVSPPPPLQK--NTPLPQSPAIPV--SGPVRLVVLGPTSGSP---- 140
PP K + + P + P L++ PLP I + SGP G P
Sbjct: 919 PPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDNSGPKLPEFSNRPPGYPSQPV 978
Query: 141 -----KTVATMLLTPLAPAPTPERSQPEVPAQQAQTGLGPVLGALQRRVRRLQRCQERHQ 195
+ + L+ +AP P P + QP+ Q Q P + Q++ Q
Sbjct: 979 EQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPP----------SQPQSQQQQQ 1028
Query: 196 AQLQALERLAQQLHGESLLARARRGLQRLTTAQTLGP------EESQTFTIICGGPDIAM 249
Q Q + L Q +S+ RL +Q + P +SQ + G M
Sbjct: 1029 QQQQMMMMLMMQQDPKSV---------RLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVM 1079
Query: 250 VLAQDPA 256
V Q PA
Sbjct: 1080 VSLQGPA 1086
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,646,206
Number of Sequences: 37866
Number of extensions: 818947
Number of successful extensions: 8679
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 655
Number of HSP's that attempted gapping in prelim test: 5953
Number of HSP's gapped (non-prelim): 2713
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.