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Search of human proteins with 22749005
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749005 family with sequence similarity 187, member B [Homo
sapiens]
(369 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749005 family with sequence similarity 187, member B [Homo ... 776 0.0
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 34 0.24
gi|4827022 contactin 2 precursor [Homo sapiens] 33 0.31
gi|109150416 peroxidasin [Homo sapiens] 33 0.31
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 33 0.41
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.91
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.91
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.91
gi|27894376 cell adhesion molecule with homology to L1CAM precur... 32 1.2
gi|139948432 adlican [Homo sapiens] 31 1.6
gi|157426829 leucine rich repeat and Ig domain containing 3 [Hom... 31 1.6
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 31 1.6
gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor [... 30 2.6
gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor [... 30 2.6
gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor [... 30 2.6
gi|118918413 MICAL C-terminal like [Homo sapiens] 30 3.5
gi|222352127 sidekick 2 [Homo sapiens] 30 4.5
gi|169217528 PREDICTED: similar to sidekick homolog 2 (chicken) ... 30 4.5
gi|7657359 contactin 5 isoform long [Homo sapiens] 30 4.5
gi|28373129 contactin 5 isoform short [Homo sapiens] 30 4.5
gi|42822893 alpha-methylacyl-CoA racemase isoform 2 [Homo sapiens] 29 5.9
gi|169162264 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 7.7
gi|239747467 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 7.7
gi|239741341 PREDICTED: similar to hCG1996527 [Homo sapiens] 29 7.7
gi|112382257 InaD-like [Homo sapiens] 29 7.7
gi|219521831 adhesion molecule with Ig-like domain 2 [Homo sapiens] 29 7.7
gi|32469517 adhesion molecule with Ig-like domain 2 [Homo sapiens] 29 7.7
>gi|22749005 family with sequence similarity 187, member B [Homo
sapiens]
Length = 369
Score = 776 bits (2004), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 1 MPPMLWLLLHFAAPALGFYFSISCPSGKQCQQALLSGNDILLYCNSSGAHWYYLFTQGKK 60
MPPMLWLLLHFAAPALGFYFSISCPSGKQCQQALLSGNDILLYCNSSGAHWYYLFTQGKK
Sbjct: 1 MPPMLWLLLHFAAPALGFYFSISCPSGKQCQQALLSGNDILLYCNSSGAHWYYLFTQGKK 60
Query: 61 GRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKNGRQVVQYEIDFQDVTTLHITH 120
GRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKNGRQVVQYEIDFQDVTTLHITH
Sbjct: 61 GRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKNGRQVVQYEIDFQDVTTLHITH 120
Query: 121 KDLGQRPLQNETLHLGSKQLIFTWWEPWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWL 180
KDLGQRPLQNETLHLGSKQLIFTWWEPWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWL
Sbjct: 121 KDLGQRPLQNETLHLGSKQLIFTWWEPWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWL 180
Query: 181 YLGEVLVWSSRLRPELQVEACHVQCTNNTQLRVDYVIFDNFRLDEKTEFVWLDCPLGSMY 240
YLGEVLVWSSRLRPELQVEACHVQCTNNTQLRVDYVIFDNFRLDEKTEFVWLDCPLGSMY
Sbjct: 181 YLGEVLVWSSRLRPELQVEACHVQCTNNTQLRVDYVIFDNFRLDEKTEFVWLDCPLGSMY 240
Query: 241 RPVNWRANDTPLTWESQLSGQDFTTFLDPSTGGRQLQVFQPAVYKCFVQQELVAQFKPAA 300
RPVNWRANDTPLTWESQLSGQDFTTFLDPSTGGRQLQVFQPAVYKCFVQQELVAQFKPAA
Sbjct: 241 RPVNWRANDTPLTWESQLSGQDFTTFLDPSTGGRQLQVFQPAVYKCFVQQELVAQFKPAA 300
Query: 301 SLETLEAQWRENDAQWREARKALRGRADSVLKGLKLVLLVVTVLALLGALLKCIHPSPGR 360
SLETLEAQWRENDAQWREARKALRGRADSVLKGLKLVLLVVTVLALLGALLKCIHPSPGR
Sbjct: 301 SLETLEAQWRENDAQWREARKALRGRADSVLKGLKLVLLVVTVLALLGALLKCIHPSPGR 360
Query: 361 RSTQVLVVK 369
RSTQVLVVK
Sbjct: 361 RSTQVLVVK 369
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 33.9 bits (76), Expect = 0.24
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 37 GNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCW 96
G+ +LL C G + Q + LT + S + ++P G+L I P G+Y C
Sbjct: 154 GDTVLLKCEVIGEPMPTIHWQKNQQDLTPIPGDSRVVVLPSGALQISRLQPGDIGIYRCS 213
Query: 97 NKN 99
+N
Sbjct: 214 ARN 216
>gi|4827022 contactin 2 precursor [Homo sapiens]
Length = 1040
Score = 33.5 bits (75), Expect = 0.31
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 37 GNDILLYCNSSGA-HWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
G +IL+ C A L+++G + L N S + + P+G+L+I++ S G Y C
Sbjct: 433 GGEILIPCQPRAAPKAVVLWSKGTE----ILVNSSRVTVTPDGTLIIRNISRSDEGKYTC 488
Query: 96 WNKN--GRQVVQYEIDFQDVTTLHITHK----DLGQR-PLQNETLHLGSKQLIFTW 144
+ +N G+ + +D T + + +LG LQ H + L FTW
Sbjct: 489 FAENFMGKANSTGILSVRDATKITLAPSSADINLGDNLTLQCHASHDPTMDLTFTW 544
>gi|109150416 peroxidasin [Homo sapiens]
Length = 1479
Score = 33.5 bits (75), Expect = 0.31
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 36 SGNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
SGN + C + G + L+ T+ S + ++ +G+L+I++ + G+Y C
Sbjct: 259 SGNTVYFTCRAEGNPKPEIIWLRNNNELSMKTD-SRLNLLDDGTLMIQNTQETDQGIYQC 317
Query: 96 WNKNGRQVVQYEIDFQDVT 114
KN V E+ Q+VT
Sbjct: 318 MAKN----VAGEVKTQEVT 332
Score = 30.4 bits (67), Expect = 2.6
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 37 GNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCW 96
G ++ L C+S G + T K G +T I PEG L I D P+ G Y C
Sbjct: 539 GANVQLPCSSQGEPEPAI-TWNKDG--VQVTESGKFHISPEGFLTINDVGPADAGRYECV 595
Query: 97 NKN 99
+N
Sbjct: 596 ARN 598
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.41
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 25 PSGKQCQQA--LLSGNDILLYCNSSGAH----WYYLFTQGKKGRLTSLTNISNMEIMPEG 78
PS +C+ L G+D+ L C SS +Y+ + K+G L S ++ G
Sbjct: 132 PSKPKCELEGELTEGSDLTLQCESSSGTEPIVYYWQRIREKEGEDERLPPKSRIDYNHPG 191
Query: 79 SLLIKDPLPSQTGLYHC--WNKNGRQVVQYEIDFQDVTTL 116
+L+++ S +GLY C N+ G++ + Q V ++
Sbjct: 192 RVLLQNLTMSYSGLYQCTAGNEAGKESCVVRVTVQYVQSI 231
Score = 29.3 bits (64), Expect = 5.9
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 47 SGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKN-GRQVVQ 105
S H Y T+ +KGR+ +N + + SL I+ PS G Y C KN GR V
Sbjct: 67 SSRHVYNNLTEEQKGRVAFASNF----LAGDASLQIEPLKPSDEGRYTCKVKNSGRYVWS 122
Query: 106 YEI 108
+ I
Sbjct: 123 HVI 125
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 32.0 bits (71), Expect = 0.91
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 40/267 (14%)
Query: 39 DILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNK 98
++LL C +SG + Q K L T +S +++P G L I P G Y C K
Sbjct: 2773 EVLLPCEASGIPRPTITWQ--KEGLNVATGVST-QVLPGGQLRIAHASPEDAGNYLCIAK 2829
Query: 99 NG--------RQVVQ----YEIDFQDVTTLHITHKDLGQRPLQNETLHLGSKQLIFTWWE 146
N R VVQ E D++T +H L + GS + TW +
Sbjct: 2830 NSAGSAMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLPCKA-------RGSPEPNITWDK 2882
Query: 147 PWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWLYLGEVLVWSSRLRPELQVEACHVQCT 206
Q + E + G ++ + + E V +R R L + V
Sbjct: 2883 DGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVGRARRRVHLTILVLPV--- 2939
Query: 207 NNTQLRVDYVIFDNFRLDEKTEFVWLDCPL-GSMYRPVNWRANDTPLTWESQLSGQDFTT 265
T L D + RL ++ +WL C GS + W ND P+T +S QD +
Sbjct: 2940 -FTTLPGD----RSLRLGDR---LWLRCAARGSPTPRIGWTVNDRPVT--EGVSEQDGGS 2989
Query: 266 FLDPSTGGRQLQVFQPAVYKCFVQQEL 292
L + R+ Y C+ + +
Sbjct: 2990 TLQRAAVSRE----DSGTYVCWAENRV 3012
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 32.0 bits (71), Expect = 0.91
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 40/267 (14%)
Query: 39 DILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNK 98
++LL C +SG + Q K L T +S +++P G L I P G Y C K
Sbjct: 3964 EVLLPCEASGIPRPTITWQ--KEGLNVATGVST-QVLPGGQLRIAHASPEDAGNYLCIAK 4020
Query: 99 NG--------RQVVQ----YEIDFQDVTTLHITHKDLGQRPLQNETLHLGSKQLIFTWWE 146
N R VVQ E D++T +H L + GS + TW +
Sbjct: 4021 NSAGSAMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLPCKA-------RGSPEPNITWDK 4073
Query: 147 PWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWLYLGEVLVWSSRLRPELQVEACHVQCT 206
Q + E + G ++ + + E V +R R L + V
Sbjct: 4074 DGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVGRARRRVHLTILVLPV--- 4130
Query: 207 NNTQLRVDYVIFDNFRLDEKTEFVWLDCPL-GSMYRPVNWRANDTPLTWESQLSGQDFTT 265
T L D + RL ++ +WL C GS + W ND P+T +S QD +
Sbjct: 4131 -FTTLPGD----RSLRLGDR---LWLRCAARGSPTPRIGWTVNDRPVT--EGVSEQDGGS 4180
Query: 266 FLDPSTGGRQLQVFQPAVYKCFVQQEL 292
L + R+ Y C+ + +
Sbjct: 4181 TLQRAAVSRE----DSGTYVCWAENRV 4203
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 32.0 bits (71), Expect = 0.91
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 40/267 (14%)
Query: 39 DILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNK 98
++LL C +SG + Q K L T +S +++P G L I P G Y C K
Sbjct: 2682 EVLLPCEASGIPRPTITWQ--KEGLNVATGVST-QVLPGGQLRIAHASPEDAGNYLCIAK 2738
Query: 99 NG--------RQVVQ----YEIDFQDVTTLHITHKDLGQRPLQNETLHLGSKQLIFTWWE 146
N R VVQ E D++T +H L + GS + TW +
Sbjct: 2739 NSAGSAMGKTRLVVQVPPVIENGLPDLSTTEGSHAFLPCKA-------RGSPEPNITWDK 2791
Query: 147 PWQDCNRCEEPGECKRLGYRYIEEPLEEAMPCWLYLGEVLVWSSRLRPELQVEACHVQCT 206
Q + E + G ++ + + E V +R R L + V
Sbjct: 2792 DGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENAVGRARRRVHLTILVLPV--- 2848
Query: 207 NNTQLRVDYVIFDNFRLDEKTEFVWLDCPL-GSMYRPVNWRANDTPLTWESQLSGQDFTT 265
T L D + RL ++ +WL C GS + W ND P+T +S QD +
Sbjct: 2849 -FTTLPGD----RSLRLGDR---LWLRCAARGSPTPRIGWTVNDRPVT--EGVSEQDGGS 2898
Query: 266 FLDPSTGGRQLQVFQPAVYKCFVQQEL 292
L + R+ Y C+ + +
Sbjct: 2899 TLQRAAVSRE----DSGTYVCWAENRV 2921
>gi|27894376 cell adhesion molecule with homology to L1CAM precursor
[Homo sapiens]
Length = 1224
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 74 IMPEGSLLIKDPLPSQTGLYHCWNKN--GRQVVQYEIDFQDVTTLHITHKDLGQRPLQNE 131
I G+L I G Y CW +N G+ V +D ++ T L ++ K+ L
Sbjct: 489 IYENGTLQINRTTEEDAGSYSCWVENAIGKTAVTANLDIRNATKLRVSPKNPRIPKLHML 548
Query: 132 TLHLGSK 138
LH SK
Sbjct: 549 ELHCESK 555
>gi|139948432 adlican [Homo sapiens]
Length = 2828
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 25 PSGK-QCQQALLSGNDILLYCN---SSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSL 80
PSG Q Q +L G L CN S +++ G + S I+ G L
Sbjct: 481 PSGAVQRDQTVLEGGPCQLSCNVKASESPSIFWVLPDGSILKAPMDDPDSKFSILSSGWL 540
Query: 81 LIKDPLPSQTGLYHC 95
IK PS +GLY C
Sbjct: 541 RIKSMEPSDSGLYQC 555
>gi|157426829 leucine rich repeat and Ig domain containing 3 [Homo
sapiens]
Length = 592
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/64 (25%), Positives = 28/64 (43%)
Query: 36 SGNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
+G D+ C + G + + R + T+ ++P G+L I+D P +G Y C
Sbjct: 421 AGEDVRFLCRAEGEPAPTVAWVTPQHRPVTATSAGRARVLPGGTLEIQDARPQDSGTYTC 480
Query: 96 WNKN 99
N
Sbjct: 481 VASN 484
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 31.2 bits (69), Expect = 1.6
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 22 ISCPSGKQCQQALLSGNDILLYCNSSG---AHWYYLFTQGKKGRLTSLTNISNMEIMPEG 78
IS + + + +L G + L C G H +L G K R ++ + I G
Sbjct: 475 ISRDNNTKLEHTVLVGGTVGLNCPGQGDPTPHVDWLLADGSKVRAPYVSEDGRILIDKSG 534
Query: 79 SLLIKDPLPSQTGLYHCWNKNGRQVVQYEIDFQDVTTLHIT 119
L ++ TG+YHC + N D D+ T IT
Sbjct: 535 KLELQMADSFDTGVYHCISSN--------YDDADILTYRIT 567
>gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor
[Homo sapiens]
Length = 1070
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 37 GNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
G+ LL C + G + +GK L M I GSL+I D P +G Y C
Sbjct: 606 GHTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTC 664
>gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor
[Homo sapiens]
Length = 940
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 37 GNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
G+ LL C + G + +GK L M I GSL+I D P +G Y C
Sbjct: 476 GHTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTC 534
>gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor
[Homo sapiens]
Length = 1030
Score = 30.4 bits (67), Expect = 2.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 37 GNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHC 95
G+ LL C + G + +GK L M I GSL+I D P +G Y C
Sbjct: 566 GHTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTC 624
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 30.0 bits (66), Expect = 3.5
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 274 RQLQVFQPAVYKCFVQQELVAQFKPAA---SLETLEAQWRENDAQWREARKALRGRADS 329
R+ + + A+ + Q+EL +K A LE +E + R ++ Q KALRG ADS
Sbjct: 520 RRRKKLEKAMKQLVKQEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALRGEADS 578
>gi|222352127 sidekick 2 [Homo sapiens]
Length = 2172
Score = 29.6 bits (65), Expect = 4.5
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 34 LLSGNDILLYCNSSGAHWYYLFTQ-GKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGL 92
++ G ++L C +SGA + Q G++ + + + GSLLI S G
Sbjct: 413 VIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGT 472
Query: 93 YHCWNKNGRQVVQYEIDFQDVTTLHITHKDLGQRPLQNETLHLGSK 138
Y C N R V + D IT +P Q++++ G++
Sbjct: 473 YTCLATNSRGVDEASADLVVWARTRIT------KPPQDQSVIKGTQ 512
>gi|169217528 PREDICTED: similar to sidekick homolog 2 (chicken)
[Homo sapiens]
Length = 399
Score = 29.6 bits (65), Expect = 4.5
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 34 LLSGNDILLYCNSSGAHWYYLFTQ-GKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGL 92
++ G ++L C +SGA + Q G++ + + + GSLLI S G
Sbjct: 225 VIDGMSVVLACETSGAPRPAITWQKGERILASGSVQLPRFTPLESGSLLISPTHISDAGT 284
Query: 93 YHCWNKNGRQVVQYEIDFQDVTTLHITHKDLGQRPLQNETLHLGSK 138
Y C N R V + D IT +P Q++++ G++
Sbjct: 285 YTCLATNSRGVDEASADLVVWARTRIT------KPPQDQSVIKGTQ 324
>gi|7657359 contactin 5 isoform long [Homo sapiens]
Length = 1100
Score = 29.6 bits (65), Expect = 4.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 59 KKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKN--GRQVVQYEIDFQDVTTL 116
KKG N + I+P+GSL I + S G Y C +N G + + ++ T +
Sbjct: 516 KKGDRAVREN-KRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKEPTRI 574
Query: 117 HITHK----DLGQRPLQN-ETLHLGSKQLIFTWWEPWQDCNRCEEPG 158
+T K +G+ + N + +H S + F W Q + EE G
Sbjct: 575 ELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEEEGG 621
>gi|28373129 contactin 5 isoform short [Homo sapiens]
Length = 1026
Score = 29.6 bits (65), Expect = 4.5
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Query: 59 KKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYHCWNKN--GRQVVQYEIDFQDVTTL 116
KKG N + I+P+GSL I + S G Y C +N G + + ++ T +
Sbjct: 442 KKGDRAVREN-KRIAILPDGSLRILNASKSDEGKYVCRGENVFGSAEIIASLSVKEPTRI 500
Query: 117 HITHK----DLGQRPLQN-ETLHLGSKQLIFTWWEPWQDCNRCEEPG 158
+T K +G+ + N + +H S + F W Q + EE G
Sbjct: 501 ELTPKRTELTVGESIVLNCKAIHDASLDVTFYWTLKGQPIDFEEEGG 547
>gi|42822893 alpha-methylacyl-CoA racemase isoform 2 [Homo sapiens]
Length = 198
Score = 29.3 bits (64), Expect = 5.9
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 26 SGKQCQQALLSGNDILLYCNSSGAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDP 85
SG C+ L+G+DI S G + + F + + S+ + S E + S + D
Sbjct: 113 SGSFCR---LAGHDINYLALSGGRNSIFKFFSVENSEIESVGSTSRTEHVGWWSTFLYDL 169
Query: 86 LPSQTGLYHCWN 97
S+ G++ CW+
Sbjct: 170 QDSRWGIHGCWS 181
>gi|169162264 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 28.9 bits (63), Expect = 7.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 65 SLTNISNMEIMPEGSLLI-----KDPLPSQTGLYHC--WNKNGRQV 103
+L N S + +MP+GSL + + LPS+ YHC N+ GR V
Sbjct: 58 ALANESGVTLMPDGSLHLAALPSRRSLPSRAHEYHCVAQNRYGRLV 103
>gi|239747467 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 28.9 bits (63), Expect = 7.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 65 SLTNISNMEIMPEGSLLI-----KDPLPSQTGLYHC--WNKNGRQV 103
+L N S + +MP+GSL + + LPS+ YHC N+ GR V
Sbjct: 58 ALANESGVTLMPDGSLHLAALPSRRSLPSRAHEYHCVAQNRYGRLV 103
>gi|239741341 PREDICTED: similar to hCG1996527 [Homo sapiens]
Length = 654
Score = 28.9 bits (63), Expect = 7.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 65 SLTNISNMEIMPEGSLLI-----KDPLPSQTGLYHC--WNKNGRQV 103
+L N S + +MP+GSL + + LPS+ YHC N+ GR V
Sbjct: 58 ALANESGVTLMPDGSLHLAALPSRRSLPSRAHEYHCVAQNRYGRLV 103
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 28.9 bits (63), Expect = 7.7
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 220 NFRLDEKTEFVWLDCPL--GSMYRPVNWRANDTPLTWESQLSGQDFTTFLDPSTGGRQLQ 277
NF K V+ D + G+++RP N W +L +DF + + GRQ++
Sbjct: 74 NFDFSRKGLLVFTDGSITNGNVHRPSNNSTVSGLFPWTPKLGNEDFNSVIQQMAQGRQIE 133
>gi|219521831 adhesion molecule with Ig-like domain 2 [Homo sapiens]
Length = 522
Score = 28.9 bits (63), Expect = 7.7
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 37 GNDILLYCNSS--GAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYH 94
G ++++C+S A+ +++ L + N + GSL+I+ P G+Y
Sbjct: 303 GERLMVHCDSKTGNANTDFIWVGPDNRLLEPDKEMENFYVFHNGSLVIESPRFEDAGVYS 362
Query: 95 CWNKNGRQVVQYEID 109
C N ++++ +D
Sbjct: 363 CIAMNKQRLLNETVD 377
>gi|32469517 adhesion molecule with Ig-like domain 2 [Homo sapiens]
Length = 522
Score = 28.9 bits (63), Expect = 7.7
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 37 GNDILLYCNSS--GAHWYYLFTQGKKGRLTSLTNISNMEIMPEGSLLIKDPLPSQTGLYH 94
G ++++C+S A+ +++ L + N + GSL+I+ P G+Y
Sbjct: 303 GERLMVHCDSKTGNANTDFIWVGPDNRLLEPDKEMENFYVFHNGSLVIESPRFEDAGVYS 362
Query: 95 CWNKNGRQVVQYEID 109
C N ++++ +D
Sbjct: 363 CIAMNKQRLLNETVD 377
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,365,058
Number of Sequences: 37866
Number of extensions: 704307
Number of successful extensions: 1536
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1503
Number of HSP's gapped (non-prelim): 65
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.