BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|22748835 transmembrane protein 178 [Homo sapiens] (297 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|22748835 transmembrane protein 178 [Homo sapiens] 615 e-176 gi|169171558 PREDICTED: hypothetical protein [Homo sapiens] 130 1e-30 gi|169171977 PREDICTED: hypothetical protein [Homo sapiens] 129 2e-30 gi|169171016 PREDICTED: hypothetical protein [Homo sapiens] 129 2e-30 gi|239509059 PREDICTED: hypothetical protein [Homo sapiens] 129 2e-30 gi|169171548 PREDICTED: hypothetical protein [Homo sapiens] 122 4e-28 gi|169171930 PREDICTED: hypothetical protein [Homo sapiens] 122 4e-28 gi|169170986 PREDICTED: hypothetical protein [Homo sapiens] 122 4e-28 gi|239509056 PREDICTED: hypothetical protein [Homo sapiens] 122 4e-28 gi|21361975 voltage-dependent calcium channel gamma-7 subunit [H... 46 5e-05 gi|22027551 voltage-dependent calcium channel gamma-5 subunit is... 42 7e-04 gi|239756473 PREDICTED: transmembrane protein 114 [Homo sapiens] 39 0.007 gi|239752599 PREDICTED: transmembrane protein 114, partial [Homo... 39 0.007 gi|226437592 transmembrane protein 114 [Homo sapiens] 39 0.007 gi|7656950 voltage-dependent calcium channel gamma-5 subunit iso... 39 0.007 gi|67188443 CD276 antigen isoform a [Homo sapiens] 37 0.027 gi|13376852 CD276 antigen isoform b [Homo sapiens] 37 0.027 gi|22027554 voltage-dependent calcium channel gamma-6 subunit is... 37 0.027 gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho... 33 0.23 gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 33 0.23 gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 33 0.23 gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Ho... 32 0.52 gi|153792186 claudin 7 [Homo sapiens] 31 1.1 gi|5174405 voltage-dependent calcium channel gamma-2 subunit [Ho... 30 2.6 gi|157743252 pecanex-like 3 [Homo sapiens] 30 2.6 gi|15718767 TRAAK [Homo sapiens] 30 3.3 gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 29 4.4 gi|41352721 solute carrier family 36 member 1 [Homo sapiens] 29 5.7 gi|120587019 zinc finger protein 318 [Homo sapiens] 29 5.7 gi|48762934 alpha 2 type I collagen [Homo sapiens] 28 7.4 >gi|22748835 transmembrane protein 178 [Homo sapiens] Length = 297 Score = 615 bits (1586), Expect = e-176 Identities = 297/297 (100%), Positives = 297/297 (100%) Query: 1 MEPRALVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCERSRAGADPPDQKNRLM 60 MEPRALVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCERSRAGADPPDQKNRLM Sbjct: 1 MEPRALVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCERSRAGADPPDQKNRLM 60 Query: 61 PLSHLPLRDSPPLGRRLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYF 120 PLSHLPLRDSPPLGRRLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYF Sbjct: 61 PLSHLPLRDSPPLGRRLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYF 120 Query: 121 LGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGF 180 LGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGF Sbjct: 121 LGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGF 180 Query: 181 LGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLP 240 LGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLP Sbjct: 181 LGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLP 240 Query: 241 KLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFISRTKIAQLKSGRDSTV 297 KLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFISRTKIAQLKSGRDSTV Sbjct: 241 KLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFISRTKIAQLKSGRDSTV 297 >gi|169171558 PREDICTED: hypothetical protein [Homo sapiens] Length = 303 Score = 130 bits (327), Expect = 1e-30 Identities = 57/110 (51%), Positives = 77/110 (70%) Query: 172 HLRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAAS 231 +LRR+TAGF+GMAVA++L G I+ + W+ L Q+VAGLLFLM G FC ISLCT A Sbjct: 175 YLRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQYVAGLLFLMGGTFCIISLCTCVAG 234 Query: 232 ISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFI 281 I+++L+R P+ +Y LP D+ HGY WS+FCAW LG + +G C P + Sbjct: 235 INFELSRYPRYLYGLPDDISHGYGWSMFCAWGGLGLTLISGFFCTLAPSV 284 >gi|169171977 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 129 bits (325), Expect = 2e-30 Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 173 LRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASI 232 LRR+TAGF+GMAVA++L G I+ + W+ L Q+VAGLLFLM G FC ISLCT A I Sbjct: 68 LRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQYVAGLLFLMGGTFCIISLCTCVAGI 127 Query: 233 SYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFI 281 +++L+R P+ +Y LP D+ HGY WS+FCAW LG + +G C P + Sbjct: 128 NFELSRYPRYLYGLPDDISHGYGWSMFCAWGGLGLTLISGFFCTLAPSV 176 >gi|169171016 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 129 bits (325), Expect = 2e-30 Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 173 LRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASI 232 LRR+TAGF+GMAVA++L G I+ + W+ L Q+VAGLLFLM G FC ISLCT A I Sbjct: 68 LRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQYVAGLLFLMGGTFCIISLCTCVAGI 127 Query: 233 SYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFI 281 +++L+R P+ +Y LP D+ HGY WS+FCAW LG + +G C P + Sbjct: 128 NFELSRYPRYLYGLPDDISHGYGWSMFCAWGGLGLTLISGFFCTLAPSV 176 >gi|239509059 PREDICTED: hypothetical protein [Homo sapiens] Length = 195 Score = 129 bits (325), Expect = 2e-30 Identities = 57/109 (52%), Positives = 76/109 (69%) Query: 173 LRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASI 232 LRR+TAGF+GMAVA++L G I+ + W+ L Q+VAGLLFLM G FC ISLCT A I Sbjct: 68 LRRMTAGFMGMAVAIILFGWIIGVLGCCWDRGLMQYVAGLLFLMGGTFCIISLCTCVAGI 127 Query: 233 SYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGLCIAYPFI 281 +++L+R P+ +Y LP D+ HGY WS+FCAW LG + +G C P + Sbjct: 128 NFELSRYPRYLYGLPDDISHGYGWSMFCAWGGLGLTLISGFFCTLAPSV 176 >gi|169171548 PREDICTED: hypothetical protein [Homo sapiens] Length = 169 Score = 122 bits (306), Expect = 4e-28 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 10/168 (5%) Query: 6 LVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCER-SRAGADPPDQKNRLMPLSH 64 L+ L L+LC+LG+L AI +DHWYETD R+H++ C+ + DP N ++ Sbjct: 6 LLLYTGLSLALCALGMLAVAICSDHWYETDARKHRDRCKAFNTRRVDPGFIYNNN---NN 62 Query: 65 LPLRDSPPLGRRLLPGGPGRA-DPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGI 123 LPLR S R L G+ + R L + D EC R +T GLWRKC+ G Sbjct: 63 LPLRAS----RSRLDRWEGKLLRARNRRQLFAMSPAD-ECSRQYNSTNMGLWRKCHRQGF 117 Query: 124 DRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLL 171 D +I LI KG +RCT IKYH+S RN+ FN+TKTI+QDEWH L Sbjct: 118 DPEIAALIRKGEIERCTYIKYHYSSATIPRNLTFNITKTIRQDEWHAL 165 >gi|169171930 PREDICTED: hypothetical protein [Homo sapiens] Length = 169 Score = 122 bits (306), Expect = 4e-28 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 10/168 (5%) Query: 6 LVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCER-SRAGADPPDQKNRLMPLSH 64 L+ L L+LC+LG+L AI +DHWYETD R+H++ C+ + DP N ++ Sbjct: 6 LLLYTGLSLALCALGMLAVAICSDHWYETDARKHRDRCKAFNTRRVDPGFIYNNN---NN 62 Query: 65 LPLRDSPPLGRRLLPGGPGRA-DPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGI 123 LPLR S R L G+ + R L + D EC R +T GLWRKC+ G Sbjct: 63 LPLRAS----RSRLDRWEGKLLRARNRRQLFAMSPAD-ECSRQYNSTNMGLWRKCHRQGF 117 Query: 124 DRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLL 171 D +I LI KG +RCT IKYH+S RN+ FN+TKTI+QDEWH L Sbjct: 118 DPEIAALIRKGEIERCTYIKYHYSSATIPRNLTFNITKTIRQDEWHAL 165 >gi|169170986 PREDICTED: hypothetical protein [Homo sapiens] Length = 169 Score = 122 bits (306), Expect = 4e-28 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 10/168 (5%) Query: 6 LVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCER-SRAGADPPDQKNRLMPLSH 64 L+ L L+LC+LG+L AI +DHWYETD R+H++ C+ + DP N ++ Sbjct: 6 LLLYTGLSLALCALGMLAVAICSDHWYETDARKHRDRCKAFNTRRVDPGFIYNNN---NN 62 Query: 65 LPLRDSPPLGRRLLPGGPGRA-DPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGI 123 LPLR S R L G+ + R L + D EC R +T GLWRKC+ G Sbjct: 63 LPLRAS----RSRLDRWEGKLLRARNRRQLFAMSPAD-ECSRQYNSTNMGLWRKCHRQGF 117 Query: 124 DRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLL 171 D +I LI KG +RCT IKYH+S RN+ FN+TKTI+QDEWH L Sbjct: 118 DPEIAALIRKGEIERCTYIKYHYSSATIPRNLTFNITKTIRQDEWHAL 165 >gi|239509056 PREDICTED: hypothetical protein [Homo sapiens] Length = 169 Score = 122 bits (306), Expect = 4e-28 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 10/168 (5%) Query: 6 LVTALSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCER-SRAGADPPDQKNRLMPLSH 64 L+ L L+LC+LG+L AI +DHWYETD R+H++ C+ + DP N ++ Sbjct: 6 LLLYTGLSLALCALGMLAVAICSDHWYETDARKHRDRCKAFNTRRVDPGFIYNNN---NN 62 Query: 65 LPLRDSPPLGRRLLPGGPGRA-DPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGI 123 LPLR S R L G+ + R L + D EC R +T GLWRKC+ G Sbjct: 63 LPLRAS----RSRLDRWEGKLLRARNRRQLFAMSPAD-ECSRQYNSTNMGLWRKCHRQGF 117 Query: 124 DRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLL 171 D +I LI KG +RCT IKYH+S RN+ FN+TKTI+QDEWH L Sbjct: 118 DPEIAALIRKGEIERCTYIKYHYSSATIPRNLTFNITKTIRQDEWHAL 165 >gi|21361975 voltage-dependent calcium channel gamma-7 subunit [Homo sapiens] Length = 275 Score = 45.8 bits (107), Expect = 5e-05 Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 28/177 (15%) Query: 109 ATYSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEW 168 A ++GLWR C+F G ++ RC A +Y I L + ++ Sbjct: 53 ALHAGLWRVCFFAGREKG-----------RCVASEYFLEPEINL----------VTENTE 91 Query: 169 HLLHLRRITAGFLGMAVAVLLCGCIVATVSFFW-EESLTQHVAGLLFLMTGIFCTISLCT 227 ++L R F +++ ++ +++ + + ++ V+G+ F+++G+ + L Sbjct: 92 NILKTVRTATPFPMVSLFLVFTAFVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVL 151 Query: 228 YAASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAG-GLCIAYPFISR 283 Y +SI+ ++ P S + Y WS A+ + F++ G G+ Y F R Sbjct: 152 YISSINDEVMNRPS---SSEQYFHYRYGWSF--AFAASSFLLKEGAGVMSVYLFTKR 203 >gi|22027551 voltage-dependent calcium channel gamma-5 subunit isoform a [Homo sapiens] Length = 275 Score = 42.0 bits (97), Expect = 7e-04 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 28/175 (16%) Query: 111 YSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHL 170 +SGLWR C+ G +R RC I+Y +P N T+ + ++ Sbjct: 55 HSGLWRVCFLAGEERG-----------RCFTIEY---------VMPMN-TQLTSESTVNV 93 Query: 171 LHLRRITAGFLGMAVAVLLCGCIVATVSFFW-EESLTQHVAGLLFLMTGIFCTISLCTYA 229 L + R F +++ + G I+ + ++ V+G+ F+++G+ + L Y Sbjct: 94 LKMIRSATPFPLVSLFFMFIGFILNNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYI 153 Query: 230 ASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVA-AGGLCIAYPFISR 283 +SI+ ++ K + Y WS A+ ++ F++ + G+ Y F+ R Sbjct: 154 SSINDEMLNRTK---DAETYFNYKYGWSF--AFAAISFLLTESAGVMSVYLFMKR 203 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 4 RALVTALSLGLSLCSLGLLVTAIFTDHW 31 R +T LS ++C LGLL A+ TD+W Sbjct: 6 RKALTLLSSVFAVCGLGLLGIAVSTDYW 33 >gi|239756473 PREDICTED: transmembrane protein 114 [Homo sapiens] Length = 223 Score = 38.5 bits (88), Expect = 0.007 Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 36/191 (18%) Query: 76 RLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGIDRDIDTLILKGI 135 RL GPG D LG ++ P+ +++SGLWR C + Sbjct: 39 RLERTGPGAQDL--------LGSINRSQPEPL-SSHSGLWRTCR---------------V 74 Query: 136 AQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGFLGMAVAVLLCGCIVA 195 CT + P RL N+ T+ + LL + L +++ +++ G + Sbjct: 75 QSPCTPLM----NPFRLENV------TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTG 124 Query: 196 TVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLPKLI--YSLPADVEHG 253 +SF + L + G+LFL + + Y A + L+ +L V+ Sbjct: 125 FLSFLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEKALLDQVDIS 184 Query: 254 YSWSIFCAWCS 264 + WS+ W S Sbjct: 185 FGWSLALGWIS 195 >gi|239752599 PREDICTED: transmembrane protein 114, partial [Homo sapiens] Length = 217 Score = 38.5 bits (88), Expect = 0.007 Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 36/191 (18%) Query: 76 RLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGIDRDIDTLILKGI 135 RL GPG D LG ++ P+ +++SGLWR C + Sbjct: 33 RLERTGPGAQDL--------LGSINRSQPEPL-SSHSGLWRTCR---------------V 68 Query: 136 AQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGFLGMAVAVLLCGCIVA 195 CT + P RL N+ T+ + LL + L +++ +++ G + Sbjct: 69 QSPCTPLM----NPFRLENV------TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTG 118 Query: 196 TVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLPKLI--YSLPADVEHG 253 +SF + L + G+LFL + + Y A + L+ +L V+ Sbjct: 119 FLSFLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEKALLDQVDIS 178 Query: 254 YSWSIFCAWCS 264 + WS+ W S Sbjct: 179 FGWSLALGWIS 189 >gi|226437592 transmembrane protein 114 [Homo sapiens] Length = 223 Score = 38.5 bits (88), Expect = 0.007 Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 36/191 (18%) Query: 76 RLLPGGPGRADPESWRSLLGLGGLDAECGRPVFATYSGLWRKCYFLGIDRDIDTLILKGI 135 RL GPG D LG ++ P+ +++SGLWR C + Sbjct: 39 RLERTGPGAQDL--------LGSINRSQPEPL-SSHSGLWRTCR---------------V 74 Query: 136 AQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHLLHLRRITAGFLGMAVAVLLCGCIVA 195 CT + P RL N+ T+ + LL + L +++ +++ G + Sbjct: 75 QSPCTPLM----NPFRLENV------TVSESSRQLLTMHGTFVILLPLSLILMVFGGMTG 124 Query: 196 TVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYDLNRLPKLI--YSLPADVEHG 253 +SF + L + G+LFL + + Y A + L+ +L V+ Sbjct: 125 FLSFLLQAYLLLLLTGILFLFGAMVTLAGISVYIAYSAAAFREALCLLEEKALLDQVDIS 184 Query: 254 YSWSIFCAWCS 264 + WS+ W S Sbjct: 185 FGWSLALGWIS 195 >gi|7656950 voltage-dependent calcium channel gamma-5 subunit isoform b [Homo sapiens] Length = 296 Score = 38.5 bits (88), Expect = 0.007 Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 27/160 (16%) Query: 111 YSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWHL 170 +SGLWR C+ G +R RC I+Y +P N T+ + ++ Sbjct: 55 HSGLWRVCFLAGEERG-----------RCFTIEY---------VMPMN-TQLTSESTVNV 93 Query: 171 LHLRRITAGFLGMAVAVLLCGCIVATVSFFW-EESLTQHVAGLLFLMTGIFCTISLCTYA 229 L + R F +++ + G I+ + ++ V+G+ F+++G+ + L Y Sbjct: 94 LKMIRSATPFPLVSLFFMFIGFILNNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYI 153 Query: 230 ASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIV 269 +SI+ ++ K + Y WS A+ ++ F++ Sbjct: 154 SSINDEMLNRTK---DAETYFNYKYGWSF--AFAAISFLL 188 Score = 29.6 bits (65), Expect = 3.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 4 RALVTALSLGLSLCSLGLLVTAIFTDHW 31 R +T LS ++C LGLL A+ TD+W Sbjct: 6 RKALTLLSSVFAVCGLGLLGIAVSTDYW 33 >gi|67188443 CD276 antigen isoform a [Homo sapiens] Length = 534 Score = 36.6 bits (83), Expect = 0.027 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 11/60 (18%) Query: 10 LSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCERSRAGADPPD-----QKNRLMPLSH 64 +++GLS+C + LLV F W R+ K+SCE AGA+ D K L PL H Sbjct: 469 VTVGLSVCLIALLVALAFVC-W-----RKIKQSCEEENAGAEDQDGEGEGSKTALQPLKH 522 >gi|13376852 CD276 antigen isoform b [Homo sapiens] Length = 316 Score = 36.6 bits (83), Expect = 0.027 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 11/60 (18%) Query: 10 LSLGLSLCSLGLLVTAIFTDHWYETDPRRHKESCERSRAGADPPD-----QKNRLMPLSH 64 +++GLS+C + LLV F W R+ K+SCE AGA+ D K L PL H Sbjct: 251 VTVGLSVCLIALLVALAFVC-W-----RKIKQSCEEENAGAEDQDGEGEGSKTALQPLKH 304 >gi|22027554 voltage-dependent calcium channel gamma-6 subunit isoform a [Homo sapiens] Length = 260 Score = 36.6 bits (83), Expect = 0.027 Identities = 47/181 (25%), Positives = 71/181 (39%), Gaps = 35/181 (19%) Query: 109 ATYSGLWRKCYF------LGIDRDI-DTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTK 161 A + GLW+ C + +DRD L G A CT K+ + + Sbjct: 78 AAHLGLWKACTKRLWQADVPVDRDTCGPAELPGEAN-CTYFKFFTTG---------ENAR 127 Query: 162 TIQQDEWHLLHLRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFC 221 Q+ ++L LG+AV L C CI+ +S E L V + F ++G+ Sbjct: 128 IFQRTTKKEVNLAAAVIAVLGLAVMALGCLCIIMVLSKGAEFLL--RVGAVCFGLSGLLL 185 Query: 222 TISLCTYAASISYDLNRL-------PKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGL 274 +SL + S+ L R+ P+L Y YSWS+ C G I+ G Sbjct: 186 LVSLEVFRHSVRALLQRVSPEPPPAPRLTYE--------YSWSLGCG-VGAGLILLLGAG 236 Query: 275 C 275 C Sbjct: 237 C 237 >gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Homo sapiens] Length = 327 Score = 33.5 bits (75), Expect = 0.23 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 32/188 (17%) Query: 110 TYSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWH 169 T+SGLWR C G I KG C R+ + P + E + Sbjct: 62 THSGLWRVCCIEG--------IYKG---HC----------FRINHFPEDNDYDHDSSE-Y 99 Query: 170 LLHLRRITAGFLGMAVAVLLCG--CIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCT 227 LL + R ++ F ++ +LL G CI A + + ++ AG+LF+ G+ I + Sbjct: 100 LLRIVRASSVFPILSTILLLLGGLCIGAGRIYSRKNNIVLS-AGILFVAAGLSNIIGIIV 158 Query: 228 YAASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVA-AGGLCIAYPFISRTKI 286 Y +S + D P + Y WS + + +L FIVA G+ +I + K Sbjct: 159 YISSNTGD----PSDKRDEDKKNHYNYGWSFY--FGALSFIVAETVGVLAVNIYIEKNKE 212 Query: 287 AQLKSGRD 294 + K+ R+ Sbjct: 213 LRFKTKRE 220 >gi|5174607 NGFI-A binding protein 2 [Homo sapiens] Length = 525 Score = 33.5 bits (75), Expect = 0.23 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 9/49 (18%) Query: 73 LGRRL--LPGGPGRADPESW------RSLLGLGGLDAECGRPVFATYSG 113 LG +L LPGGPG DP W S +G GG + E G P F+ +G Sbjct: 166 LGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGG-EEEAGSPPFSPPAG 213 >gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo sapiens] Length = 425 Score = 33.5 bits (75), Expect = 0.23 Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 30/200 (15%) Query: 97 GGLDAECGRPVFATYSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIP 156 GG +E P T+SGLWR C G+ R + C I HF + Sbjct: 70 GGGASEKKDPGGLTHSGLWRICCLEGLKRGV-----------CVKIN-HFPED------- 110 Query: 157 FNLTKTIQQDEWHLLHLRRITAGF-LGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFL 215 T +LL + R ++ F + A+ +LL G VA + + AG+LF+ Sbjct: 111 ---TDYDHDSAEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFV 167 Query: 216 MTGIFCTISLCTYAASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVA-AGGL 274 G+ I + Y ++ + + P + Y WS + + L FI+A G+ Sbjct: 168 AAGLSNIIGVIVYISANAGE----PGPKRDEEKKNHYSYGWSFY--FGGLSFILAEVIGV 221 Query: 275 CIAYPFISRTKIAQLKSGRD 294 +I R++ A +S D Sbjct: 222 LAVNIYIERSREAHCQSRSD 241 >gi|4502539 voltage-dependent calcium channel gamma-1 subunit [Homo sapiens] Length = 222 Score = 32.3 bits (72), Expect = 0.52 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Query: 2 EPRALVTALSLGLSLCSLGLLVTAIFTDHWYETDP--RRHKESCERSRAGADPPDQKNRL 59 + + L ++L L + L +TA+ TDHW P H +CE + G Sbjct: 3 QTKMLKVRVTLFCILAGIVLAMTAVVTDHWAVLSPHMEHHNTTCEAAHFGL-------WR 55 Query: 60 MPLSHLPLRDSPPLGRRLLPG 80 + +P+ DS G LPG Sbjct: 56 ICTKRIPMDDSKTCGPITLPG 76 >gi|153792186 claudin 7 [Homo sapiens] Length = 211 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 176 ITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYAASISYD 235 + GFL M VA + C +++ G++F++ G+ ++ Y I D Sbjct: 88 LVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVACSWYGHQIVTD 147 Query: 236 L-NRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVAAGGL 274 N L +P ++++ + +IF W ++ G L Sbjct: 148 FYNPL------IPTNIKYEFGPAIFIGWAGSALVILGGAL 181 >gi|5174405 voltage-dependent calcium channel gamma-2 subunit [Homo sapiens] Length = 323 Score = 30.0 bits (66), Expect = 2.6 Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 30/177 (16%) Query: 110 TYSGLWRKCYFLGIDRDIDTLILKGIAQRCTAIKYHFSQPIRLRNIPFNLTKTIQQDEWH 169 T+SGLWR C G KG+ + ++ + P + E+ Sbjct: 59 THSGLWRTCCLEG--------NFKGLCK-------------QIDHFPEDADYEADTAEYF 97 Query: 170 LLHLRRITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFCTISLCTYA 229 L +R + + + + + G +A F+ AG+ F+ G+ I + Y Sbjct: 98 LRAVRASSIFPILSVILLFMGGLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYI 157 Query: 230 ASISYDLNRLPKLIYSLPADVEHGYSWSIFCAWCSLGFIVA-AGGLCIAYPFISRTK 285 ++ + D ++ S + Y WS + + +L FI+A G+ + FI R K Sbjct: 158 SANAGDPSK------SDSKKNSYSYGWSFY--FGALSFIIAEMVGVLAVHMFIDRHK 206 >gi|157743252 pecanex-like 3 [Homo sapiens] Length = 2034 Score = 30.0 bits (66), Expect = 2.6 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 13/82 (15%) Query: 211 GLLFLMTGIFCTI---SLCTYAASISYDLNRLPKLIYSLPADVEHGYSWSI-------FC 260 G L L+ G F I C AS Y L K + A HG++W I FC Sbjct: 807 GYLLLLKGFFTDIWVFQFCLVIASCQYSLL---KSVQPDAASPMHGHNWVIAYSRPVYFC 863 Query: 261 AWCSLGFIVAAGGLCIAYPFIS 282 C L +++ A G +P +S Sbjct: 864 ICCLLIWLLDALGSAQPFPPVS 885 >gi|15718767 TRAAK [Homo sapiens] Length = 393 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 44 ERSRAGADPPDQKNRLMPLSHLPLRDSPPLGRRLLPGGPGRADPES 89 +R+ A PP+++ L+P P + PLGR P P +A P S Sbjct: 288 QRAGPAAPPPEKEQPLLPPPPCPAQ---PLGRPRSPSPPEKAQPPS 330 >gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] Length = 1604 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/29 (44%), Positives = 16/29 (55%) Query: 78 LPGGPGRADPESWRSLLGLGGLDAECGRP 106 LPG PG P + GL GLD + G+P Sbjct: 1196 LPGSPGPPGPPGIQGPAGLDGLDGKDGKP 1224 >gi|41352721 solute carrier family 36 member 1 [Homo sapiens] Length = 476 Score = 28.9 bits (63), Expect = 5.7 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%) Query: 170 LLHLRR--ITAGFLGMAVAVLLCGCIVATVSFFWEESLTQHVAGLLFLMTGIFC---TIS 224 L+HL + I G LG+ +AV G ++ +S + H G+L FC S Sbjct: 53 LIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKCAHHFCRRLNKS 112 Query: 225 LCTYAASISYDLNRLP 240 Y ++ Y L P Sbjct: 113 FVDYGDTVMYGLESSP 128 >gi|120587019 zinc finger protein 318 [Homo sapiens] Length = 2279 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Query: 37 RRHKESCERSRAGADPPDQKNRLMPLSHLPLRDSP--PLGRRLLPGGP 82 R S R R + P + R+ P R SP P GRRL P GP Sbjct: 56 RPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGP 103 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 73 LGRRLLPGGPGRADPESWRSLLGLGGLDAECGRP 106 +G R LPG PG P +GL G+D GRP Sbjct: 447 MGPRGLPGSPGNIGPAGKEGPVGLPGID---GRP 477 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.326 0.141 0.461 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,409,405 Number of Sequences: 37866 Number of extensions: 598917 Number of successful extensions: 2385 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 2298 Number of HSP's gapped (non-prelim): 98 length of query: 297 length of database: 18,247,518 effective HSP length: 102 effective length of query: 195 effective length of database: 14,385,186 effective search space: 2805111270 effective search space used: 2805111270 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.