Guide to the Human Genome
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Name: FRMD6 Sequence: fasta or formatted (614aa) NCBI GI: 22748721
Description:

FERM domain containing 6

Referenced in:

Cytoskeleton

Other entries for this name:
alt mRNA [614aa] FERM domain containing 6
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         25           2
 C cysteine            2.4         15           1
 D aspartate           6.7         41           2
 E glutamate           6.8         42           2
 F phenylalanine       3.3         20           1
 G glycine             4.7         29           2
 H histidine           4.2         26           1
 I isoleucine          5.2         32           3
 K lysine              7.2         44           2
 L leucine            11.2         69           2
 M methionine          2.6         16           1
 N asparagine          3.7         23           2
 P proline             3.3         20           2
 Q glutamine           4.6         28           2
 R arginine            6.2         38           2
 S serine              9.6         59           4
 T threonine           3.7         23           1
 V valine              4.9         30           2
 W tryptophan          0.7          4           1
 Y tyrosine            4.9         30           4
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FERM domain containing 6 
FRMD6                 1.000   FERM domain containing 6 
FRMD1                 0.289   FERM domain containing 1 isoform 1 
FRMD1                 0.278   FERM domain containing 1 isoform 2 
PTPN13                0.102   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.102   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.102   protein tyrosine phosphatase, non-receptor type 13 is...
PTPN13                0.100   protein tyrosine phosphatase, non-receptor type 13 i...
FRMPD2                0.082   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.082   FERM and PDZ domain containing 2 isoform 3 
MSN                   0.054   moesin 
EZR                   0.054   ezrin 
EZR                   0.054   ezrin 
RDX                   0.054   radixin 
NF2                   0.047   neurofibromin 2 isoform 2 
NF2                   0.047   neurofibromin 2 isoform 2 
NF2                   0.047   neurofibromin 2 isoform 2 
NF2                   0.047   neurofibromin 2 isoform 1 
FRMD4B                0.045   FERM domain containing 4B 
NF2                   0.043   neurofibromin 2 isoform 5 
PTPN14                0.043   protein tyrosine phosphatase, non-receptor type 14 [...
FRMD5                 0.043   FERM domain containing 5 isoform 2 
PTPN4                 0.041   protein tyrosine phosphatase, non-receptor type 4 [Ho...
FRMD4A                0.041   FERM domain containing 4A 
EPB41L4A              0.041   erythrocyte protein band 4.1-like 4 
PTPN3                 0.038   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.038   protein tyrosine phosphatase, non-receptor type 3 i...
FRMD3                 0.036   FERM domain containing 3 
PTPN21                0.035   protein tyrosine phosphatase, non-receptor type 21 ...
NF2                   0.034   neurofibromin 2 isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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