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Search of human proteins with 22748699
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748699 hypothetical protein LOC121273 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748699 hypothetical protein LOC121273 [Homo sapiens] 258 7e-70
gi|63082035 hypothetical protein LOC51149 isoform 2 [Homo sapiens] 33 0.045
gi|63082033 hypothetical protein LOC51149 isoform 1 [Homo sapiens] 33 0.045
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.077
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.077
gi|38570099 glutamine-rich 1 [Homo sapiens] 33 0.077
gi|38570097 glutamine-rich 1 [Homo sapiens] 33 0.077
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 31 0.22
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 31 0.22
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 31 0.29
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 31 0.29
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 31 0.29
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 31 0.29
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 30 0.50
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ... 30 0.50
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ... 30 0.50
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ... 30 0.50
gi|197313748 SET domain containing 2 [Homo sapiens] 30 0.65
gi|209862789 microtubule associated monoxygenase, calponin and L... 29 0.85
gi|116686122 kinesin family member 4 [Homo sapiens] 29 1.1
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi... 28 1.9
gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens] 28 1.9
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 28 1.9
gi|13899338 activin beta E [Homo sapiens] 28 1.9
gi|148539558 dystrophin related protein 2 [Homo sapiens] 28 1.9
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 28 2.5
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i... 28 2.5
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 28 2.5
gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens] 27 3.2
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens] 27 3.2
>gi|22748699 hypothetical protein LOC121273 [Homo sapiens]
Length = 127
Score = 258 bits (660), Expect = 7e-70
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQED 60
MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQED
Sbjct: 1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQED 60
Query: 61 ARIRGMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQ 120
ARIRGMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQ
Sbjct: 61 ARIRGMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQ 120
Query: 121 SAYYPGP 127
SAYYPGP
Sbjct: 121 SAYYPGP 127
>gi|63082035 hypothetical protein LOC51149 isoform 2 [Homo sapiens]
Length = 288
Score = 33.5 bits (75), Expect = 0.045
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLT-------VFKDIQKEL 57
PC QE + ++ + R +E P + QVT T + W Q + V + + L
Sbjct: 139 PCL-QENSADCSAGELRGPG-KELWSPIQ-QVTATSSKWAQFVLPPRKSSHVDSEQPRSL 195
Query: 58 QEDARIRGMSNCSM-TPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSG 107
Q D R G + TP A R G RP ++ P+ S E+P G
Sbjct: 196 QRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPCG 246
>gi|63082033 hypothetical protein LOC51149 isoform 1 [Homo sapiens]
Length = 343
Score = 33.5 bits (75), Expect = 0.045
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLT-------VFKDIQKEL 57
PC QE + ++ + R +E P + QVT T + W Q + V + + L
Sbjct: 194 PCL-QENSADCSAGELRGPG-KELWSPIQ-QVTATSSKWAQFVLPPRKSSHVDSEQPRSL 250
Query: 58 QEDARIRGMSNCSM-TPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSG 107
Q D R G + TP A R G RP ++ P+ S E+P G
Sbjct: 251 QRDPRPAGPAQAKQGTPRAQASREGLSRPTAAVQLPRATHPVTSGSERPCG 301
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 32.7 bits (73), Expect = 0.077
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTV------------FKDIQ 54
Q +EQ+ +M +++R +E +R +E+++ E +W+QV + +D +
Sbjct: 384 QMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQE 443
Query: 55 KELQEDARIR 64
+++QE+ RIR
Sbjct: 444 EKMQEEERIR 453
Score = 28.9 bits (63), Expect = 1.1
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQV-TITETLWDQVLTVFKDIQKELQEDARI 63
+EQ+ +M ++++ EE MR QE+++ E LW+Q + + QK ++ R+
Sbjct: 344 REQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERM 399
Score = 27.3 bits (59), Expect = 3.2
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 7 QDQEQKVE----MTSKQQRSTSIEETMRPQ-EKQVTITETLWDQ 45
+DQE+K++ + ++++ EETMR Q EK E +W+Q
Sbjct: 440 RDQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQ 483
Score = 26.2 bits (56), Expect = 7.2
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWD-----QVLTVFKDIQKELQEDARI 63
QEQ+ EM ++++ EE M Q++ E LW+ + +++ +K ++ ++
Sbjct: 744 QEQEEEMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKM 803
Query: 64 RG 65
RG
Sbjct: 804 RG 805
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.077
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIR 64
Q +EQ+ +M +++R +E +R +E+++ E +W+Q ++++QE+ RIR
Sbjct: 346 QMREQEQKMRDQEERMWEQDERLREKEERMREQEKMWEQ--------EEKMQEEERIR 395
Score = 28.9 bits (63), Expect = 1.1
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQV-TITETLWDQVLTVFKDIQKELQEDARI 63
+EQ+ +M ++++ EE MR QE+++ E LW+Q + + QK ++ R+
Sbjct: 306 REQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERM 361
Score = 25.8 bits (55), Expect = 9.4
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIR 64
++Q+ +M +++R E MR QE+++ E + ++ +KEL+E ++R
Sbjct: 251 RKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLR 306
Score = 25.8 bits (55), Expect = 9.4
Identities = 13/56 (23%), Positives = 33/56 (58%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIR 64
+EQ+ +M +++R E+ +R QEK++ + L +Q + + +K +++ ++R
Sbjct: 272 REQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMR 327
Score = 25.8 bits (55), Expect = 9.4
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 3 QHPCQDQEQKVE----MTSKQQRSTSIEETMRPQ-EKQVTITETLWDQ 45
Q +QE+K++ + ++++ EETMR Q EK E +W+Q
Sbjct: 378 QEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQ 425
>gi|38570099 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 32.7 bits (73), Expect = 0.077
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIR 64
P QEQ++++ QQ ++ PQ+ ++ LTV + ++ +Q +I+
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQ-----LTVHQPTEQPIQVQVQIQ 140
Query: 65 GMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQ 98
G + P ++AP SI+ P SL +P +LQ
Sbjct: 141 GQA-----PQSAAP---SIQTP-SLQSPSPSQLQ 165
>gi|38570097 glutamine-rich 1 [Homo sapiens]
Length = 776
Score = 32.7 bits (73), Expect = 0.077
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 14/94 (14%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIR 64
P QEQ++++ QQ ++ PQ+ ++ LTV + ++ +Q +I+
Sbjct: 86 PQTQQEQQIQVQQPQQVQVQVQVQQSPQQVSAQLSPQ-----LTVHQPTEQPIQVQVQIQ 140
Query: 65 GMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQ 98
G + P ++AP SI+ P SL +P +LQ
Sbjct: 141 GQA-----PQSAAP---SIQTP-SLQSPSPSQLQ 165
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 31.2 bits (69), Expect = 0.22
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARI 63
Q Q+ EM +K++ + E E ++T ETL Q++ +Q++LQ + +
Sbjct: 839 QVSRQEEEMMAKEEELVKVREKQLAAENRLTEMETLQSQLMAEKLQLQEQLQAETEL 895
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 31.2 bits (69), Expect = 0.22
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 21/88 (23%)
Query: 3 QHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDAR 62
+ P +D EQ +T +Q E +R Q+K+ EL ED R
Sbjct: 3225 EFPEEDAEQLKHVTEQQSMVQKQLEQIRKQQKE------------------HAELIEDYR 3266
Query: 63 IRGMSNCSMTPMTSAPRTGSIRPPDSLM 90
I+ C+M P T P S++P L+
Sbjct: 3267 IKQQQQCAMAPPTMMP---SVQPQPPLI 3291
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 30.8 bits (68), Expect = 0.29
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITE-TLWDQVLTVFKDIQKELQEDARIRGMS 67
QEQ + ++QR EE +R +E+++ E LWDQ ++K ++ +++ R+
Sbjct: 375 QEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQ 434
Query: 68 NCSMTPMTSAPR 79
N + + P+
Sbjct: 435 NHKLDKQLAEPQ 446
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 30.8 bits (68), Expect = 0.29
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITE-TLWDQVLTVFKDIQKELQEDARIRGMS 67
QEQ + ++QR EE +R +E+++ E LWDQ ++K ++ +++ R+
Sbjct: 375 QEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQ 434
Query: 68 NCSMTPMTSAPR 79
N + + P+
Sbjct: 435 NHKLDKQLAEPQ 446
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 30.8 bits (68), Expect = 0.29
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITE-TLWDQVLTVFKDIQKELQEDARIRGMS 67
QEQ + ++QR EE +R +E+++ E LWDQ ++K ++ +++ R+
Sbjct: 375 QEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQ 434
Query: 68 NCSMTPMTSAPR 79
N + + P+
Sbjct: 435 NHKLDKQLAEPQ 446
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 30.8 bits (68), Expect = 0.29
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITE-TLWDQVLTVFKDIQKELQEDARIRGMS 67
QEQ + ++QR EE +R +E+++ E LWDQ ++K ++ +++ R+
Sbjct: 375 QEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQ 434
Query: 68 NCSMTPMTSAPR 79
N + + P+
Sbjct: 435 NHKLDKQLAEPQ 446
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 30.0 bits (66), Expect = 0.50
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 51 KDIQKELQEDARIRGMSNCSMTPMTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGG 108
+D+ L++ + G+S S +P S PR+ S+ P + + SG +P GG
Sbjct: 682 RDLTFNLRQGSDTSGLSRFSRSPRLSQPRSESLGSSSDKTLPSITEAE--SGAEPGGG 737
>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
[Homo sapiens]
Length = 818
Score = 30.0 bits (66), Expect = 0.50
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDA------- 61
Q Q + Q R S + ++P+ ++ T+T + ++ K +Q +LQ++A
Sbjct: 293 QVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQ 352
Query: 62 -RIRGMSNCSMTPMTSAPRTGSIRPPD 87
++ + S+ P P S++PP+
Sbjct: 353 PQVHTQAQPSVQPQEHPPAQVSVQPPE 379
>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
[Homo sapiens]
Length = 837
Score = 30.0 bits (66), Expect = 0.50
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDA------- 61
Q Q + Q R S + ++P+ ++ T+T + ++ K +Q +LQ++A
Sbjct: 312 QVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQ 371
Query: 62 -RIRGMSNCSMTPMTSAPRTGSIRPPD 87
++ + S+ P P S++PP+
Sbjct: 372 PQVHTQAQPSVQPQEHPPAQVSVQPPE 398
>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
[Homo sapiens]
Length = 842
Score = 30.0 bits (66), Expect = 0.50
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDA------- 61
Q Q + Q R S + ++P+ ++ T+T + ++ K +Q +LQ++A
Sbjct: 317 QVQAQVQSQTQPRIPSTDTQVQPKLQKQAQTQTSPEHLVLQQKQVQPQLQQEAEPQKQVQ 376
Query: 62 -RIRGMSNCSMTPMTSAPRTGSIRPPD 87
++ + S+ P P S++PP+
Sbjct: 377 PQVHTQAQPSVQPQEHPPAQVSVQPPE 403
>gi|197313748 SET domain containing 2 [Homo sapiens]
Length = 2564
Score = 29.6 bits (65), Expect = 0.65
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWD--QVLTVFKDIQKELQEDAR 62
P QD+E+ V ++ ++T+ + + ++ D +V + K Q E +
Sbjct: 1979 PSQDEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKENTTT 2038
Query: 63 IRGMSNCSMTPMTSAPRTGS---IRPPDSLMTPKLRRLQFSSGEQPS 106
RG T AP+T + R PD K +R + SS PS
Sbjct: 2039 ERGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLSPPS 2085
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 29.3 bits (64), Expect = 0.85
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 5 PCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTIT-----ETLWDQVLTVFKDIQKELQE 59
P ++ + + + R ++E T++PQ++ + + E +++ K ++ +
Sbjct: 1551 PRPEKPRHPPLAKENGRLPALEGTLQPQKRGLPLVSAEAKELAEERMRAREKSVKSQALR 1610
Query: 60 DARIRGMSNCSMTPM----------TSAPRTGSIRPPDSLMTPKLR 95
DA R +S + +SAP G R PDS P LR
Sbjct: 1611 DAMARQLSRMQQMELASGAPRPRKASSAPSQGKERRPDSPTRPTLR 1656
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 7 QDQEQKVEMTSKQQRST----SIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDAR 62
Q QE+ + + S+ Q+S +EE++ +E+Q+ T D+ L +++ ++ Q+ R
Sbjct: 926 QHQEKVLYLLSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEELEKMREVCEQNQQLLR 985
Query: 63 IRGMSNCSMTPMTSAPRTGSIRPPDSLMTP 92
+ +T + A R + P D+L++P
Sbjct: 986 ENEIIKQKLTLLQVASRQKHL-PKDTLLSP 1014
>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 436
Score = 28.1 bits (61), Expect = 1.9
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMRPQEKQV-TITETLWDQ 45
Q +EQ+ +M ++++ EE MR QE+Q+ E +W+Q
Sbjct: 297 QMREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQ 336
Score = 26.9 bits (58), Expect = 4.2
Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQV-TITETLWDQVLTVFKDIQKELQE 59
M + Q +EQ+ +M ++++ EE M QE+Q+ E +W+Q ++K ++ ++
Sbjct: 298 MREQEEQMREQEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQ 357
Query: 60 DARIR 64
+ +++
Sbjct: 358 EEQMQ 362
Score = 26.6 bits (57), Expect = 5.5
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQE 59
M + Q EQ+ +M ++++ EE MR QE+Q+ E +QV + +QK+ ++
Sbjct: 201 MGEQEEQMGEQEEQMQKQEEQMGEQEEQMRKQEEQMGEQE---EQVQKQEEQVQKQEEQ 256
Score = 25.8 bits (55), Expect = 9.4
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQ 58
Q QE++V+ +Q R EE MR QE+Q+ E +Q+L + ++E Q
Sbjct: 244 QKQEEQVQKQEEQMRKQ--EEQMREQEEQMREQE---EQMLKQKEQTEQEEQ 290
>gi|114155140 tropomyosin 3 isoform 1 [Homo sapiens]
Length = 285
Score = 28.1 bits (61), Expect = 1.9
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQ 58
++ + E ++RS +E+ + +K++ TE D+ KD Q++L+
Sbjct: 24 EQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLE 73
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 28.1 bits (61), Expect = 1.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGM 66
+E+++E T Q IEE +EK++ I V D +KE +E+ + + M
Sbjct: 315 REEELEETGNQHNDVEIEEAGEEEEKEIAI----------VHSDAEKEQEEEEQKQEM 362
>gi|13899338 activin beta E [Homo sapiens]
Length = 350
Score = 28.1 bits (61), Expect = 1.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 74 MTSAPRTGSIRPPDSLMTPKLRRLQFSSGEQPSGGRIHNLKTQLFSQSAY 123
+TS PR + PP + +T LRRLQ S +G + + T S SAY
Sbjct: 57 LTSRPRI-THPPPQAALTRALRRLQPGSVAPGNGEEVISFATVTDSTSAY 105
>gi|148539558 dystrophin related protein 2 [Homo sapiens]
Length = 957
Score = 28.1 bits (61), Expect = 1.9
Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 1 MAQHPCQDQEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQV----LTVFKDIQKE 56
++QHP ++ E+ + I+ R KQ T+ LW+++ + + I++
Sbjct: 170 LSQHPFEELEEPHSESKDTSPKQRIQNLSRFVWKQATVASELWEKLTARCVDQHRHIERT 229
Query: 57 LQEDARIRGMSNCSMTPMTSA 77
L++ I+G T ++ A
Sbjct: 230 LEQLLEIQGAMEELSTTLSQA 250
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 27.7 bits (60), Expect = 2.5
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQVTITETLWDQVLTVFKDIQKELQEDARIRGMSN 68
QEQ+ +M +++ EE M+ QE E +W+Q + + +K +++ +++G
Sbjct: 121 QEQEEKMQEQEEMMWEQEEKMQEQE------EKMWEQEEKMREQEEKMREQEEKMQGQEE 174
Query: 69 CSMTPMTSAPRTGSIRPPDSLMTPKLRRL 97
+ G P D+ ++ +L
Sbjct: 175 KMRDVEPAGGEAGEGSPQDNPTAQEIMQL 203
Score = 25.8 bits (55), Expect = 9.4
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 9 QEQKVEMTSKQQRSTSIEETMRPQEKQV-TITETLWDQVLTVF------KDIQKELQEDA 61
QEQ+ +M ++++ EE M+ QE+++ E +W+Q ++ + +K ++D
Sbjct: 29 QEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKMWEQDE 88
Query: 62 RIR 64
R+R
Sbjct: 89 RLR 91
>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
isoform 1 [Homo sapiens]
Length = 721
Score = 27.7 bits (60), Expect = 2.5
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 3 QHPCQDQEQKVEMTSK--QQRSTSIEETMRPQEKQVTITETLWD-QVLTVFKD 52
+H C + K+E + +QR IEE R Q+K T+T+ ++D Q ++KD
Sbjct: 432 KHMCSVLQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKD 484
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 27.7 bits (60), Expect = 2.5
Identities = 13/27 (48%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Query: 37 TITETLWDQVLTVFKDIQKELQEDARI 63
T+ E L+D+VL +D+QKEL+E++ I
Sbjct: 393 TVQEKLFDEVLD--RDVQKELEEESPI 417
>gi|126362969 Nck-associated protein 5 isoform 2 [Homo sapiens]
Length = 590
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMR---------PQEKQVTITETLWDQVLTVFKDIQKEL 57
+ + +++M S QQ+ + +EET+R Q+K+ T+ ++ + L+ + KE
Sbjct: 97 ESERNRIQMRSLQQQFSRMEETVRNLLQSQGSPEQKKEETVNIMVYQEKLSEEERKHKEA 156
Query: 58 QED 60
ED
Sbjct: 157 LED 159
>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
Length = 1909
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 7 QDQEQKVEMTSKQQRSTSIEETMR---------PQEKQVTITETLWDQVLTVFKDIQKEL 57
+ + +++M S QQ+ + +EET+R Q+K+ T+ ++ + L+ + KE
Sbjct: 97 ESERNRIQMRSLQQQFSRMEETVRNLLQSQGSPEQKKEETVNIMVYQEKLSEEERKHKEA 156
Query: 58 QED 60
ED
Sbjct: 157 LED 159
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.126 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,299,189
Number of Sequences: 37866
Number of extensions: 221996
Number of successful extensions: 994
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 214
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.