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Search of human proteins with 226530795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens] 501 e-142
gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens] 495 e-140
gi|21071074 Kruppel-like factor 12 [Homo sapiens] 123 1e-28
gi|108860697 zinc finger protein 592 [Homo sapiens] 40 0.002
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 40 0.003
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2... 38 0.008
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1... 38 0.008
gi|194272180 plexin B1 [Homo sapiens] 38 0.010
gi|40254442 plexin B1 [Homo sapiens] 38 0.010
gi|91982772 mucin 17 [Homo sapiens] 37 0.017
gi|161019170 mucin 5AC [Homo sapiens] 37 0.022
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 36 0.038
gi|31563338 forkhead box K2 [Homo sapiens] 35 0.049
gi|9945318 MAX binding protein [Homo sapiens] 35 0.064
gi|219802034 nuclear factor related to kappaB binding protein is... 35 0.064
gi|23346420 nuclear factor related to kappaB binding protein iso... 35 0.064
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 34 0.11
gi|33946327 nucleoporin 214kDa [Homo sapiens] 34 0.11
gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens] 34 0.11
gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens] 34 0.11
gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens] 34 0.11
gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens] 34 0.11
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 34 0.11
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 34 0.11
gi|153792294 myopalladin [Homo sapiens] 34 0.11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.11
gi|83367077 mucin 16 [Homo sapiens] 34 0.14
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 34 0.14
gi|67010025 Sp4 transcription factor [Homo sapiens] 34 0.14
gi|169214154 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
>gi|226530795 Kruppel-like factor 8 isoform 2 [Homo sapiens]
Length = 257
Score = 501 bits (1289), Expect = e-142
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP 60
MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP
Sbjct: 1 MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP 60
Query: 61 ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL 120
ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL
Sbjct: 61 ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL 120
Query: 121 VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV 180
VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV
Sbjct: 121 VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV 180
Query: 181 VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG 240
VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG
Sbjct: 181 VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG 240
Query: 241 SSALQSLQGLQQEREAL 257
SSALQSLQGLQQEREAL
Sbjct: 241 SSALQSLQGLQQEREAL 257
>gi|89111943 Kruppel-like factor 8 isoform 1 [Homo sapiens]
Length = 359
Score = 495 bits (1274), Expect = e-140
Identities = 254/257 (98%), Positives = 255/257 (99%)
Query: 1 MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP 60
MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP
Sbjct: 1 MVDMDKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENP 60
Query: 61 ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL 120
ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL
Sbjct: 61 ALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL 120
Query: 121 VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV 180
VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV
Sbjct: 121 VVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPV 180
Query: 181 VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG 240
VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG
Sbjct: 181 VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESG 240
Query: 241 SSALQSLQGLQQEREAL 257
SSALQSLQGLQQE A+
Sbjct: 241 SSALQSLQGLQQEPAAM 257
>gi|21071074 Kruppel-like factor 12 [Homo sapiens]
Length = 402
Score = 123 bits (309), Expect = 1e-28
Identities = 83/235 (35%), Positives = 127/235 (54%), Gaps = 29/235 (12%)
Query: 44 SNMTSPTLLDANPMEN-PALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPAS 102
S SP + + ME P L N++K EPPE+ L+ D Q EPVDLS +K + P +
Sbjct: 38 SEQGSPNVHNYPDMEAVPLLLNNVKGEPPEDSLSVDHFQTQTEPVDLSINKART--SPTA 95
Query: 103 MLQAPIRPPKPQSSPQTLVVSTSTSD-----------MSTSANIPTVLTPGSVLTSSQST 151
+ +P+ SSP + S+S+S +S++++ TVLTPG ++ S+
Sbjct: 96 VSSSPVSMTASASSPSSTSTSSSSSSRLASSPTVITSVSSASSSSTVLTPGPLVASASGV 155
Query: 152 GSQQILHVIHTIPSVS----LPNKMGGLKTIPVVVQSLPMVYTTLPADGG-PAAITVPLI 206
G QQ LH+IH +P S NK+ + IPVVVQS+P+VYT + + G I VPL+
Sbjct: 156 GGQQFLHIIHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLL 215
Query: 207 GGDGKNAGSVKVDPTSMSPLEIPSDSE---------ESTIESGSSALQSLQGLQQ 252
DG+ G ++DP +SP + SDS+ +S E+GS+AL + +Q+
Sbjct: 216 -EDGRGHGKAQMDPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQE 269
>gi|108860697 zinc finger protein 592 [Homo sapiens]
Length = 1267
Score = 40.0 bits (92), Expect = 0.002
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 9/184 (4%)
Query: 78 DFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVV-STSTSDMSTSANIP 136
D S P E S PK+P P S L+A + KP SP+++ S+S S +A+ P
Sbjct: 310 DLSGPTKESSKGSPKMPKSPKSPRSPLEATRKSIKPSDSPRSICSDSSSKGSPSVAASSP 369
Query: 137 TVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADG 196
+ + T S+G + V +P P+K + + P + +P D
Sbjct: 370 PAIPKVRIKTIKTSSGEIK-RTVTRILPDPDDPSKSPVGSPLGSAIAEAP---SEMPGDE 425
Query: 197 GPAAITVPLIG-GDGKNAGSVKVDP--TSMSPLEIPSDSEESTIESGSSALQSLQGLQQE 253
P P G G G+ K D T S PS S + G +A S G +Q+
Sbjct: 426 VPVEEHFPEAGTNSGSPQGARKGDESMTKASDSSSPSCSSGPRVPKG-AAPGSQTGKKQQ 484
Query: 254 REAL 257
AL
Sbjct: 485 STAL 488
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical
region 1 [Homo sapiens]
Length = 1400
Score = 39.7 bits (91), Expect = 0.003
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 25/231 (10%)
Query: 36 DPPEIEYRSNMTSPTLLDANPMENPALFNDIKI-----EPPEELLASDFSLPQVEPVDLS 90
+P E R+ T A P EN + K EP E + + P + +
Sbjct: 883 EPTENRERTANEKTTQFPAEPTENRESTANEKTTPFPAEPTENREWTANENTTLSPAEPT 942
Query: 91 FHKPKAPLQPASMLQAPIRPPKPQSSPQTL---VVSTSTSDMSTSANIPTVLTPGSVLTS 147
H+ PL LQAP R P+ + V ST+ S+ ST++ I T T SV +
Sbjct: 943 EHEEMTPLMVDENLQAPFRQGSCAERPKDICATVASTTGSESSTASEIITSSTM-SVSAT 1001
Query: 148 SQSTGSQQILHVIHTIPSVSLPNKMGGLKTI--------PVVVQSL----PMVYTTLPAD 195
+ ST S + T+ S ++P +TI PV L + +TT+
Sbjct: 1002 ASSTASSTASEI--TMSSAAIPVSSTAYETIRFSTAVSEPVTASILALESTLAFTTVSNT 1059
Query: 196 GGPAAIT-VPLIGGDGKNAGSVKVDPT-SMSPLEIPSDSEESTIESGSSAL 244
+ +T VP + + + T S + + + SE++T+ + +S +
Sbjct: 1060 TTSSTVTSVPTTASTSGSKNTTACEATMSETTIAAITASEDTTVSTQTSVI 1110
>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
[Homo sapiens]
Length = 1481
Score = 38.1 bits (87), Expect = 0.008
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 10 NLEVQLNSEGGSMQVF----KQVTASVR---NRDPPEIEYRSNMTSPTLLDANPMENPAL 62
N EV+ +S+ G +++ K + ++ RD I + + +P + + E P
Sbjct: 469 NTEVKNSSDTGKVKLDENSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETPPP 528
Query: 63 FNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVV 122
I PP L + PQ P+ P P QP P P SS TL
Sbjct: 529 LPTIASPPPP--LPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPP 586
Query: 123 ST--STSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHV-IHTIPSVSLPNKMGGLKTIP 179
ST TS +S+ AN P V +Q + + I H+ T+P + LP + G +
Sbjct: 587 STHSKTSAVSSQANSQ---PPVQVSVKTQVSVTAAIPHLKTSTLPPLPLPPLLPGDDDMD 643
Query: 180 VVVQSLP 186
++LP
Sbjct: 644 SPKETLP 650
>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
[Homo sapiens]
Length = 1490
Score = 38.1 bits (87), Expect = 0.008
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 15/187 (8%)
Query: 10 NLEVQLNSEGGSMQVF----KQVTASVR---NRDPPEIEYRSNMTSPTLLDANPMENPAL 62
N EV+ +S+ G +++ K + ++ RD I + + +P + + E P
Sbjct: 469 NTEVKNSSDTGKVKLDENSEKHLVKDLKAQGTRDSKPIALKEEIVTPKETETSEKETPPP 528
Query: 63 FNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVV 122
I PP L + PQ P+ P P QP P P SS TL
Sbjct: 529 LPTIASPPPP--LPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPP 586
Query: 123 ST--STSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHV-IHTIPSVSLPNKMGGLKTIP 179
ST TS +S+ AN P V +Q + + I H+ T+P + LP + G +
Sbjct: 587 STHSKTSAVSSQANSQ---PPVQVSVKTQVSVTAAIPHLKTSTLPPLPLPPLLPGDDDMD 643
Query: 180 VVVQSLP 186
++LP
Sbjct: 644 SPKETLP 650
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 37.7 bits (86), Expect = 0.010
Identities = 64/223 (28%), Positives = 92/223 (41%), Gaps = 49/223 (21%)
Query: 66 IKIEP--PEELLASDFSLPQVEPVDLSFHKPKA-------PLQPASMLQAPIRPPKPQSS 116
+ +EP P ASD S P P LS P A P S L PP PQ+
Sbjct: 709 LPVEPGAPSTATASDIS-PGASPSLLSPWGPWAGSGSISSPGSTGSPLHEEPSPPSPQNG 767
Query: 117 PQTLVVSTSTSDMSTSAN----IPTVLTPGSVLTSSQSTGSQQILHVI-------HTIPS 165
P T V + +D SA + + L+P V + + LH T+P+
Sbjct: 768 PGTAV--PAPTDFRPSATPEDLLASPLSPSEVAAVPPADPGPEALHPTVPLDLPPATVPA 825
Query: 166 VSLPNKMGGLKTIPVVVQSLPMVYTTLP-AD---GG--PAAITVPLIGGDGKNAGSVKVD 219
+ P MG +K + L LP AD GG PA T L+ GDG +A ++
Sbjct: 826 TTFPGAMGSVKP---ALDWLTREGGELPEADEWTGGDAPAFSTSTLLSGDGDSA-ELEGP 881
Query: 220 PTSMSPLEIPS------------DSEESTIESGS-SALQSLQG 249
P +PL +PS + EE+T+ + S ++S+QG
Sbjct: 882 P---APLILPSSLDYQYDTPGLWELEEATLGASSCPCVESVQG 921
>gi|40254442 plexin B1 [Homo sapiens]
Length = 2135
Score = 37.7 bits (86), Expect = 0.010
Identities = 64/223 (28%), Positives = 92/223 (41%), Gaps = 49/223 (21%)
Query: 66 IKIEP--PEELLASDFSLPQVEPVDLSFHKPKA-------PLQPASMLQAPIRPPKPQSS 116
+ +EP P ASD S P P LS P A P S L PP PQ+
Sbjct: 709 LPVEPGAPSTATASDIS-PGASPSLLSPWGPWAGSGSISSPGSTGSPLHEEPSPPSPQNG 767
Query: 117 PQTLVVSTSTSDMSTSAN----IPTVLTPGSVLTSSQSTGSQQILHVI-------HTIPS 165
P T V + +D SA + + L+P V + + LH T+P+
Sbjct: 768 PGTAV--PAPTDFRPSATPEDLLASPLSPSEVAAVPPADPGPEALHPTVPLDLPPATVPA 825
Query: 166 VSLPNKMGGLKTIPVVVQSLPMVYTTLP-AD---GG--PAAITVPLIGGDGKNAGSVKVD 219
+ P MG +K + L LP AD GG PA T L+ GDG +A ++
Sbjct: 826 TTFPGAMGSVKP---ALDWLTREGGELPEADEWTGGDAPAFSTSTLLSGDGDSA-ELEGP 881
Query: 220 PTSMSPLEIPS------------DSEESTIESGS-SALQSLQG 249
P +PL +PS + EE+T+ + S ++S+QG
Sbjct: 882 P---APLILPSSLDYQYDTPGLWELEEATLGASSCPCVESVQG 921
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 37.0 bits (84), Expect = 0.017
Identities = 60/247 (24%), Positives = 91/247 (36%), Gaps = 40/247 (16%)
Query: 16 NSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELL 75
+SEG ++ VT++ I + + S T+ + PME L I +
Sbjct: 3708 SSEGSTLSTPSVVTSTPVTTSTEAISSSATLDSTTMSVSMPMEISTLGTTILVSTTPVTR 3767
Query: 76 ASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANI 135
+ S P + V S A + SSP TL T+T MST++
Sbjct: 3768 FPESSTPSIPSVYTSMSMTTAS--------------EGSSSPTTLE-GTTTMPMSTTSER 3812
Query: 136 PTVLTPGSVLTSSQSTGSQQILHVIHTIP--------------SVSLPNKMGGLKTIPVV 181
T+LT +VL S S S + T P S S+P ++ ++
Sbjct: 3813 STLLT--TVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITS 3870
Query: 182 VQSLP----MVYTTLPAD--GGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEES 235
+S P +V TTLP G A T PL D + D S + + + S
Sbjct: 3871 ERSTPLTTLLVSTTLPTSFPGASIASTPPL---DTSTTFTPSTDTASTPTIPVATTISVS 3927
Query: 236 TIESGSS 242
I GS+
Sbjct: 3928 VITEGST 3934
Score = 31.2 bits (69), Expect = 0.93
Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 33/235 (14%)
Query: 29 TASVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVD 88
T S + PP + S TS + P+ N + F+ + E S + PV
Sbjct: 3314 TYSQASSSPPIADGTSMPTSTYSEGSTPLTNMS-FSTTPVVSSEASTLSTTPVDTSTPVT 3372
Query: 89 LSFHKPKAPLQPASMLQAPIRPPKPQSSP-------QTLVVSTSTSDMST---------- 131
S +P A P P ++P T VVS+ + +ST
Sbjct: 3373 TSTEASLSPTT-AEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVT 3431
Query: 132 ----SANIPTVLTPGSVLTSSQSTGSQQI-LHVIHTIPSVSLPNKMGGLKTIPVVVQSLP 186
+++ PT+ S+ TS+ S GS + + + T P S ++ L T P V +
Sbjct: 3432 TSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVAS--SEASTLSTTP--VDTST 3487
Query: 187 MVYTTLPADGGPAAITVPLIGGDGKNAGSVKVD--PTSMSPLEIPSDSEESTIES 239
V T+ P + P V + GS + P S +P+ + SE ST+ +
Sbjct: 3488 PVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPV---ASSEASTLST 3539
Score = 28.9 bits (63), Expect = 4.6
Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 100 PASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHV 159
PA+ I + SSP T ++ + T + P TP S + + S S +
Sbjct: 299 PAATNIPVITSTEASSSPTTAEGTSIPTSTYTEGSTPLTSTPASTMPVATSEMSTLSITP 358
Query: 160 IHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGP----AAITVPLIGGDGKNAGS 215
+ T V+ + L P ++ M+ +TL P T+ + + +
Sbjct: 359 VDTSTLVTTSTEPSSL---PTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSEASTTST 415
Query: 216 VKVDPTSMSPLEIPSDSEESTIESGSSA 243
+ VD + + S +T E S A
Sbjct: 416 IPVDSKTFVTTASEASSSPTTAEDTSIA 443
Score = 28.9 bits (63), Expect = 4.6
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 123 STSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHV-IHTIPSVSLPNKMGGLKTIPVV 181
ST + + +++PT S+LTS+ S GS + ++ + TI S ++ TIP
Sbjct: 362 STLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVAS--SEASTTSTIP-- 417
Query: 182 VQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVD--PTSMSPLEIPSDSEEST 236
V S V T A P I + GS + P S +P+ S ST
Sbjct: 418 VDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLST 474
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 36.6 bits (83), Expect = 0.022
Identities = 46/198 (23%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 47 TSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQA 106
T+ T A P +P + PP S S + H A+M +A
Sbjct: 5069 TTTTGFTATPSSSPGT----ALTPPTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRA 5124
Query: 107 PIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSV 166
P S TL + ++++T+A T GS T S + G+ IL TI +V
Sbjct: 5125 TNSTATPSS---TLGTTRILTELTTTAT--TTAATGSTATLSSTPGTTWILTEPSTIATV 5179
Query: 167 SLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPL 226
+P + + P V TT+ A TVP S T+ +P
Sbjct: 5180 MVPTGSTATASSTLGTAHTPKVVTTMATMPTATASTVP----------SSSTVGTTRTPA 5229
Query: 227 EIPSDSEESTIESGSSAL 244
+PS ++ + SS++
Sbjct: 5230 VLPSSLPTFSVSTVSSSV 5247
Score = 30.4 bits (67), Expect = 1.6
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSL 168
PPK +SP T T+TS +TS++ P T VLT ST ++ + IPS +L
Sbjct: 4751 PPKVLTSPAT--TPTATSSKATSSSSPRTATTLPVLT---STATKSTATSVTPIPSSTL 4804
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 107 PIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSV 166
P P P+ T T+TS +TS++ P T VLT ST ++ IPS
Sbjct: 3599 PGTAPPPKVLTSTATTPTATSSKATSSSSPRTATTLPVLT---STATKSTATSFTPIPSF 3655
Query: 167 SL 168
+L
Sbjct: 3656 TL 3657
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 35.8 bits (81), Expect = 0.038
Identities = 44/184 (23%), Positives = 69/184 (37%), Gaps = 26/184 (14%)
Query: 62 LFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLV 121
L D+ +P + +D + V P D +P+ P + +P+ P P SP LV
Sbjct: 1228 LVPDLADDPVVSVTIADSPVIPVTPAD-------SPVVPVTSADSPVVPVTPADSPVILV 1280
Query: 122 VSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVV 181
T+A+ P VL ST ++ V + S +P +PV
Sbjct: 1281 TPVGPVVSVTTADGPVVLV---------STADSPVIPVT-SADSPVVPVTPADGPVVPVT 1330
Query: 182 VQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEI-PSDSEESTIESG 240
P V T PAD P++ ++ V V P + + P+DS + S
Sbjct: 1331 SADSPFVPVT-PADD-------PIVPVTPADSPIVSVTPAESPAIPVTPADSPVVPVTSA 1382
Query: 241 SSAL 244
S L
Sbjct: 1383 DSPL 1386
Score = 29.6 bits (65), Expect = 2.7
Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 32/176 (18%)
Query: 65 DIKIEPPEELLASDFSLPQVEPVD---LSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLV 121
D+ +P + SD + V P D + P+ P + + +P+ P P SP V
Sbjct: 2378 DLADDPVVSVTTSDSPVIPVTPTDSPVVPVAPADGPVVPVTSVDSPVVPVTPADSP---V 2434
Query: 122 VSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVV 181
+ + +D S +P V++ + + G +P + I V
Sbjct: 2435 IPVTPAD---SLVVPATPADDPVVSVTPADGP-------------VVPVTTADIPVISVT 2478
Query: 182 VQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTI 237
P+V T PADG + VP+ D SV V T +P D +S I
Sbjct: 2479 SADSPVVPVT-PADG----LVVPVTSAD-----SVVVPATPADCPLVPVDPADSPI 2524
Score = 28.1 bits (61), Expect = 7.9
Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 15/184 (8%)
Query: 70 PPEELLASDFSLPQVEPVD---LSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTST 126
P + ++D L V P D + P+ P S P+ P P SP + T+
Sbjct: 466 PVVPVTSADIPLVPVTPPDGPVVPVTSADGPVAPVSSADGPVVPVTPADSP--FIPVTTA 523
Query: 127 SDM---STSANIPTV-LTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVV 182
D+ T A+ P + +TP + I+ V V +P +PV+
Sbjct: 524 DDLIVPVTPADSPVLSVTPAESPAIPVTPADSPIVPVTPANGPV-VPVTSADSPFVPVIP 582
Query: 183 QSLPMVYTTLPADGGPAAIT---VPLIGGDGKNAGSVKVDPTSMSPLEI-PSDSEESTIE 238
P+V T PAD +T P++ ++ +V V P + + P+D +
Sbjct: 583 ADGPVVPVT-PADSPVVPVTPADSPVLSVTLADSPAVPVTPADSPVVPVTPADGPVVPVA 641
Query: 239 SGSS 242
S S
Sbjct: 642 SADS 645
Score = 28.1 bits (61), Expect = 7.9
Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 39/159 (24%)
Query: 94 PKAPLQPASML-------QAPIRPPKPQSSPQTLVVSTSTSDMS-TSANIPTVL------ 139
P P+ PA L +PI P P SP LV S + + T A+ P V
Sbjct: 1664 PVVPVTPADGLVVPVTPADSPIVPVTPADSPVVLVTSADSPVIPVTPADSPVVPVTSADT 1723
Query: 140 -TPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGP 198
+PGS +TS+ V+ + SLP +PV P+V T ADG
Sbjct: 1724 DSPGSPVTSADGP-------VVPVTSADSLP--------VPVTPADGPVVPVT-SADGPV 1767
Query: 199 AAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTI 237
A P+ DG V V P SP+ + +++ T+
Sbjct: 1768 A----PVSSADGP---VVPVTPAD-SPVVPVTTADDPTV 1798
Score = 28.1 bits (61), Expect = 7.9
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 31 SVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLS 90
SV + D P + T ++ P + P + P + +D + V P D
Sbjct: 2147 SVASADSPVVPVTPADT--VVVPVTPADGPVIPVTPAESPAIPVTPADSPVVPVTPAD-- 2202
Query: 91 FHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQS 150
P P+ PA +PI P P S P VV + +D TPGS + S+
Sbjct: 2203 --DPVVPVTPAD---SPIVPVPPASDP---VVPVTPAD-----------TPGSPVASADG 2243
Query: 151 TGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITV 203
+ + + S +P G +PV P V+ ADG +T+
Sbjct: 2244 P-----VVPVTSADSPLVPVTPGDSPVVPVTPADSP-VFPVTSADGPVFPVTL 2290
>gi|31563338 forkhead box K2 [Homo sapiens]
Length = 660
Score = 35.4 bits (80), Expect = 0.049
Identities = 44/153 (28%), Positives = 61/153 (39%), Gaps = 18/153 (11%)
Query: 73 ELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTS 132
E L+ + S +EP + A +Q A Q+ P P SS L+ +
Sbjct: 391 ESLSREGSPAPLEPEPGAAQPKLAVIQEARFAQSA--PGSPLSSQPVLITVQRQLPQAIK 448
Query: 133 ANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTL 192
TV TP V TS+ Q +HV+H IP+VS+ + GL S V T
Sbjct: 449 PVTYTVATP--VTTSTSQPPVVQTVHVVHQIPAVSV-TSVAGLAPANTYTVSGQAVVT-- 503
Query: 193 PADGGPAAITVP-----LIGGDGKNAGSVKVDP 220
PAA+ P GD + VKV+P
Sbjct: 504 -----PAAVLAPPKAEAQENGDHREV-KVKVEP 530
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 35.0 bits (79), Expect = 0.064
Identities = 46/208 (22%), Positives = 76/208 (36%), Gaps = 32/208 (15%)
Query: 27 QVTASVRNRDPPEIEYRSNMTSPT---LLDANPMENPALFNDIKIE--PPEELLASDFSL 81
++ +R PE + S T+ +D + E+ A K+ P ELL S
Sbjct: 311 EIDRVLRQTGQPEDDQASTSTASEGEDNIDEDMEEDRAGLGPPKLSHRPQPELLKSTLPP 370
Query: 82 PQVEPVDLS--------------FHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVS---- 123
P P L H P QP P PP P + QTLV +
Sbjct: 371 PSTTPAPLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAPAQTLVPAPAHL 430
Query: 124 TSTSDMSTSANIPTVLTPGSVLTS----SQSTGSQQILHVIHTIPSVSL-----PNKMGG 174
+T+ ++ T T SV+ + Q G + I H+ + PS ++ +G
Sbjct: 431 VATAGGGSTVIAHTATTHASVIQTVNHVLQGPGGKHIAHIAPSAPSPAVQLAPATPPIGH 490
Query: 175 LKTIPVVVQSLPMVYTTLPADGGPAAIT 202
+ P + + + + LP P A++
Sbjct: 491 ITVHPATLNHVAHLGSQLPLYPQPVAVS 518
Score = 28.9 bits (63), Expect = 4.6
Identities = 30/125 (24%), Positives = 44/125 (35%), Gaps = 19/125 (15%)
Query: 80 SLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTL------VVSTSTSDMSTSA 133
+LP EP + +AP P S P PP P ++P L VV+ S +
Sbjct: 52 TLPVEEP------RMEAPPLPLSPPAPPPAPPPPLATPAPLTVIPIPVVTNSPQPLPPPP 105
Query: 134 NIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLP 193
+P P + + L + P S P +P LP T+P
Sbjct: 106 PLPAAAQPLPLAPRQPALVGAPGLSIKEPAPLPSRPQ-------VPTPAPLLPDSKATIP 158
Query: 194 ADGGP 198
+G P
Sbjct: 159 PNGSP 163
>gi|219802034 nuclear factor related to kappaB binding protein
isoform 1 [Homo sapiens]
Length = 1299
Score = 35.0 bits (79), Expect = 0.064
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 59/254 (23%)
Query: 35 RDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKP 94
+ P +++ S +S +L + P E ++ SD S+P P ++ P
Sbjct: 681 KPPSKVKSSSKESSIKVLSSGPSEQ------------SQMSLSDSSMP---PTPVTPVTP 725
Query: 95 KAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTS------DMSTSANIPTVLTPGS----- 143
P PA + P +S P T+ +S T ++ T+L+P S
Sbjct: 726 TTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGTMLSPASSQTAP 785
Query: 144 -------VLTSSQSTGSQQILHVIH-TIPSVSLPNKMGG-LKTIP--------------- 179
V++ S S G Q+ V ++P+V P + GG +T+P
Sbjct: 786 SSQAAARVVSHSGSAGLSQVRVVAQPSLPAV--PQQSGGPAQTLPQMPAGPQIRVPATAT 843
Query: 180 ---VVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEEST 236
VV Q+ V T+P A TV G G+ +V P + SP+ P+ S T
Sbjct: 844 QTKVVPQT---VMATVPVKAQTTAATVQR-PGPGQTGLTVTSLPATASPVSKPATSSPGT 899
Query: 237 IESGSSALQSLQGL 250
+S +Q +
Sbjct: 900 SAPSASTAAVIQNV 913
>gi|23346420 nuclear factor related to kappaB binding protein
isoform 2 [Homo sapiens]
Length = 1324
Score = 35.0 bits (79), Expect = 0.064
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 59/254 (23%)
Query: 35 RDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKP 94
+ P +++ S +S +L + P E ++ SD S+P P ++ P
Sbjct: 706 KPPSKVKSSSKESSIKVLSSGPSEQ------------SQMSLSDSSMP---PTPVTPVTP 750
Query: 95 KAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTS------DMSTSANIPTVLTPGS----- 143
P PA + P +S P T+ +S T ++ T+L+P S
Sbjct: 751 TTPALPAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGTMLSPASSQTAP 810
Query: 144 -------VLTSSQSTGSQQILHVIH-TIPSVSLPNKMGG-LKTIP--------------- 179
V++ S S G Q+ V ++P+V P + GG +T+P
Sbjct: 811 SSQAAARVVSHSGSAGLSQVRVVAQPSLPAV--PQQSGGPAQTLPQMPAGPQIRVPATAT 868
Query: 180 ---VVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEEST 236
VV Q+ V T+P A TV G G+ +V P + SP+ P+ S T
Sbjct: 869 QTKVVPQT---VMATVPVKAQTTAATVQR-PGPGQTGLTVTSLPATASPVSKPATSSPGT 924
Query: 237 IESGSSALQSLQGL 250
+S +Q +
Sbjct: 925 SAPSASTAAVIQNV 938
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 34.3 bits (77), Expect = 0.11
Identities = 51/225 (22%), Positives = 79/225 (35%), Gaps = 24/225 (10%)
Query: 29 TASVRNRDPPE-------IEYRSNMTSPTLLDANPME--NPALFNDIKIEPPEELLASDF 79
TA+VR P E + TSP P E +PA + PPEE +
Sbjct: 989 TAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAA----AVPPPEEPTSPAA 1044
Query: 80 SLPQVEPVD---LSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIP 136
++P E + P+ P PA+ + P P P ++ V T S +A +P
Sbjct: 1045 AVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAA-----VPTPEEPTSPAAAVP 1099
Query: 137 TVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADG 196
T P S + + ++ +P+ P P + P P +
Sbjct: 1100 TPEEPTSPAAAVPT--PEEPASPAAAVPTPEEPASPAAAVPTP-EEPAFPAPAVPTPEES 1156
Query: 197 GPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEESTIESGS 241
AA+ VP A +V S S + + EE T + S
Sbjct: 1157 ASAAVAVPTPEESASPAAAVPTPAESASFAAVVATLEEPTSPAAS 1201
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 34.3 bits (77), Expect = 0.11
Identities = 49/208 (23%), Positives = 75/208 (36%), Gaps = 28/208 (13%)
Query: 19 GGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASD 78
GG+ VF ++S+++ E S + A P P+ F+ + P + LA
Sbjct: 476 GGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFSFVP--PSKASLAPT 533
Query: 79 FSLPQVEPVDLSFH------KPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTS 132
+ V P SF KP P + AP KP P T V + S+ T+
Sbjct: 534 PAASPVAPSAASFSFGSSGFKPTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTA 593
Query: 133 ANIPTVLT------PGSVLTS-SQSTGSQQILHVI-------------HTIPSVSLPNKM 172
A T ++ P S +S S+ S + H +PS S +
Sbjct: 594 AATSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQ 653
Query: 173 GGLKTIPVVVQSLPMVYTTLPADGGPAA 200
G +P +VQ P + G P A
Sbjct: 654 GSSSPVPSMVQKSPRITPPAAKPGSPQA 681
>gi|21536357 TBP-associated factor 6 isoform delta [Homo sapiens]
Length = 667
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLP 169
PP+P P +V MS+S++ P+ S+ TS+ +GS V T+PSV
Sbjct: 518 PPQPSPPPTKFIV------MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQ-- 569
Query: 170 NKMGGLKTIPVVVQSLPMVYTTLP---ADGGPAAITVPLI-----GGDGKNAGSVKVDPT 221
P+V L TT P A GP ++ ++ G+GK PT
Sbjct: 570 ---------PIV--KLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGG------PT 612
Query: 222 SMSPLEIPSDSEESTIESGSS 242
S P +P + + SGS+
Sbjct: 613 S-HPSPVPPPASSPSPLSGSA 632
>gi|21536355 TBP-associated factor 6 isoform gamma [Homo sapiens]
Length = 667
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLP 169
PP+P P +V MS+S++ P+ S+ TS+ +GS V T+PSV
Sbjct: 518 PPQPSPPPTKFIV------MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQ-- 569
Query: 170 NKMGGLKTIPVVVQSLPMVYTTLP---ADGGPAAITVPLI-----GGDGKNAGSVKVDPT 221
P+V L TT P A GP ++ ++ G+GK PT
Sbjct: 570 ---------PIV--KLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGG------PT 612
Query: 222 SMSPLEIPSDSEESTIESGSS 242
S P +P + + SGS+
Sbjct: 613 S-HPSPVPPPASSPSPLSGSA 632
>gi|5032147 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLP 169
PP+P P +V MS+S++ P+ S+ TS+ +GS V T+PSV
Sbjct: 528 PPQPSPPPTKFIV------MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQ-- 579
Query: 170 NKMGGLKTIPVVVQSLPMVYTTLP---ADGGPAAITVPLI-----GGDGKNAGSVKVDPT 221
P+V L TT P A GP ++ ++ G+GK PT
Sbjct: 580 ---------PIV--KLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGG------PT 622
Query: 222 SMSPLEIPSDSEESTIESGSS 242
S P +P + + SGS+
Sbjct: 623 S-HPSPVPPPASSPSPLSGSA 642
>gi|21536359 TBP-associated factor 6 isoform alpha [Homo sapiens]
Length = 677
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 34/141 (24%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLP 169
PP+P P +V MS+S++ P+ S+ TS+ +GS V T+PSV
Sbjct: 528 PPQPSPPPTKFIV------MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQ-- 579
Query: 170 NKMGGLKTIPVVVQSLPMVYTTLP---ADGGPAAITVPLI-----GGDGKNAGSVKVDPT 221
P+V L TT P A GP ++ ++ G+GK PT
Sbjct: 580 ---------PIV--KLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGG------PT 622
Query: 222 SMSPLEIPSDSEESTIESGSS 242
S P +P + + SGS+
Sbjct: 623 S-HPSPVPPPASSPSPLSGSA 642
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 34.3 bits (77), Expect = 0.11
Identities = 44/201 (21%), Positives = 72/201 (35%), Gaps = 15/201 (7%)
Query: 44 SNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASM 103
S T T P+ + L+ + S S + H A+M
Sbjct: 4743 STATKSTATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVLTTTATM 4802
Query: 104 LQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTI 163
+A P S TL + ++++T+A T GS T S + G+ IL TI
Sbjct: 4803 TRATNSTATPSS---TLGTTRILTELTTTAT--TTAATGSTATLSSTPGTTWILTEPSTI 4857
Query: 164 PSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSM 223
+V +P + + P V TT+ A TVP S T+
Sbjct: 4858 ATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTATASTVP----------SSSTVGTTR 4907
Query: 224 SPLEIPSDSEESTIESGSSAL 244
+P +PS ++ + SS++
Sbjct: 4908 TPAVLPSSLPTFSVSTVSSSV 4928
Score = 30.4 bits (67), Expect = 1.6
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 110 PPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSL 168
PPK +SP T T+TS +TS++ P T VLT ST ++ + IPS +L
Sbjct: 4281 PPKVLTSPAT--TPTATSSKATSSSSPRTATTLPVLT---STATKSTATSVTPIPSSTL 4334
Score = 28.1 bits (61), Expect = 7.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 107 PIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSV 166
P P P+ T T+TS +TS++ P T VLT ST ++ IPS
Sbjct: 3019 PGTAPPPKVLTSTATTPTATSSKATSSSSPRTATTLPVLT---STATKSTATSFTPIPSF 3075
Query: 167 SL 168
+L
Sbjct: 3076 TL 3077
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 34.3 bits (77), Expect = 0.11
Identities = 52/258 (20%), Positives = 95/258 (36%), Gaps = 27/258 (10%)
Query: 5 DKLINNLEVQLNSEGGSMQVFKQVTASVRNRDPPEIEYRSNMTSPTLLD---ANPMENPA 61
D+L + V + EG +++ K +A + +PP E P L++ A PA
Sbjct: 232 DELREEVTVPVVQEGSAVK--KVASAEI---EPPSTEKFPAKIQPPLVEEATAKAEPRPA 286
Query: 62 LFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLV 121
++++P E + V + P A P A I+PP + SP +
Sbjct: 287 EETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVEL 346
Query: 122 VS---TSTSDMSTSANIPTVLTPG--------SVLTSSQSTGSQQILHVIHTIPSVSLPN 170
++ +++ S S P + P +L +S +Q+ + +P+
Sbjct: 347 LAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALE 406
Query: 171 KMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPS 230
+ P V ++L V LP + P + P +P E S
Sbjct: 407 EAPAKVEPPTVEETLADVQPLLPEE-------APREEARELQLSTAMETPAEEAPTEFQS 459
Query: 231 D-SEESTIESGSSALQSL 247
+E+T E S+ +Q L
Sbjct: 460 PLPKETTAEEASAEIQLL 477
Score = 32.7 bits (73), Expect = 0.32
Identities = 52/223 (23%), Positives = 87/223 (39%), Gaps = 34/223 (15%)
Query: 36 DPPEIEYRSNMTSPTLLDANPMENPA-LFNDIKIEPPEELLASDFSLPQVEPVDLSFHKP 94
+PP +E P L + P E L +E P E ++F P P + + +
Sbjct: 413 EPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPL--PKETTAEEA 470
Query: 95 KAPLQPASMLQAPI-RPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGS 153
A +Q + + P P SP +S TS A + + L ++ T +
Sbjct: 471 SAEIQLLAATEPPADETPAEARSP----LSEETSAEEAHAEVQSPL--------AEETTA 518
Query: 154 QQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNA 213
++ I + ++ P P QS P+ T A+ PA + P +A
Sbjct: 519 EEASAEIQLLAAIEAP-----ADETPAEAQS-PLSEET-SAEEAPAEVQSP-------SA 564
Query: 214 GSVKVDPTSMSPLEI-PSDSEESTIESGSSALQSLQGLQQERE 255
V ++ +PLE+ P EE+T E S+A+Q L + E
Sbjct: 565 KGVSIEE---APLELQPPSGEETTAEEASAAIQLLAATEASAE 604
>gi|153792294 myopalladin [Homo sapiens]
Length = 1320
Score = 34.3 bits (77), Expect = 0.11
Identities = 47/217 (21%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Query: 35 RDPPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKP 94
++PP + + + S L + N L +++ P +F L+ + P
Sbjct: 647 KEPPPVLAKPKLDSTQL---QQLHNQVLLEQHQLQNPPPSSPKEFPFSMTV---LNSNAP 700
Query: 95 KAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQ 154
A + ++AP + P+ ST+T+ + + + V T S + Q T S+
Sbjct: 701 PAVTTSSKQVKAPSSQTFSLARPKYFFPSTNTTAATVAPSSSPVFTLSSTPQTIQRTVSK 760
Query: 155 QILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAG 214
+ L V H PSV + GGL +Q+ P+ P + P T + G+
Sbjct: 761 ESLLVSH--PSVQTKSP-GGLS-----IQNEPL--PPGPTEPTPPPFTFSIPSGN----- 805
Query: 215 SVKVDPTSMSPLEI-PSDSEESTIESGSSALQSLQGL 250
+ P +SP+ + P+ ++ + SS L SL +
Sbjct: 806 --QFQPRCVSPIPVSPTSRIQNPVAFLSSVLPSLPAI 840
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.3 bits (77), Expect = 0.11
Identities = 39/158 (24%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 48 SPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPK-APLQPASMLQA 106
+PT A P P+ + PP+ + + P L+ PK AP PA+ +
Sbjct: 1148 APTTPAATP---PSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1204
Query: 107 P---IRPPKPQSSPQTLVVSTST--SDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIH 161
P + P P+ +P T + + ++T + TP + S + +
Sbjct: 1205 PKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAP 1264
Query: 162 TIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPA 199
T P+ + P+ GGL T P P V T GGPA
Sbjct: 1265 TPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA 1302
Score = 32.0 bits (71), Expect = 0.54
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 23/155 (14%)
Query: 37 PPEIEYRSNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKA 96
P E+ + + + L E P ++ I PP A + P + P A
Sbjct: 77 PLEVPFPQSSSGTALPLGTAPEAPTFLPNL-IGPPISPAALALASPMIAPTLKGTPSSSA 135
Query: 97 PLQ-----PASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQST 151
PL P S+ ++ PP +SP ++ V+ S GSV+T S
Sbjct: 136 PLALVALAPHSVQKSSAFPPNLLTSPPSVAVAES----------------GSVITLSAPI 179
Query: 152 GSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLP 186
+ ++ +PS +PN G + P +V ++P
Sbjct: 180 APSEPKTNLNKVPSEVVPNPK-GTPSPPCIVSTVP 213
Score = 32.0 bits (71), Expect = 0.54
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 10/106 (9%)
Query: 94 PKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGS 153
P P + + PP P+ SP + + A+ P TP S S +T
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSP-------AATPFPKGASTPPAATPPSPKGSPAAT-- 1050
Query: 154 QQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPA 199
+ T P+ +LP+ GG T + P T GGPA
Sbjct: 1051 -PLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Score = 28.9 bits (63), Expect = 4.6
Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 41/152 (26%)
Query: 97 PLQPASMLQAPIRPPKPQSSPQT---LVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGS 153
P PA+++ AP+ P +P + T + VS D N+P+ SVL
Sbjct: 477 PTSPAALVMAPVAPKEPSTQVATTLRIPVSPPLPDPEDLKNLPS-----SVL-------- 523
Query: 154 QQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAA----ITVPLIGGD 209
V P + L+T+P ++ P PA G +PL+
Sbjct: 524 ------------VKFPTQK-DLQTVPASLEGAPF----SPAQAGLTTKKDPTVLPLVQAA 566
Query: 210 GKNAGSVKVDPTSMSPLEIPSDSEESTIESGS 241
KN+ S + TS SP EIP S E+T+ S
Sbjct: 567 PKNSPSFQ--STSSSP-EIPL-SPEATLAKKS 594
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.9 bits (76), Expect = 0.14
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 44 SNMTSPTLLDANPMENPALFNDIKIEPPEELLASDFSLPQVEPVDLSFHKPKAPLQPASM 103
SN++ + +A ME P+ F+ I P A P + V S P+ ++
Sbjct: 4623 SNVSVGAITEATKMEVPS-FDATFIPTP----AQSTKFPDIFSVASSRLSNSPPMTISTH 4677
Query: 104 LQAPIRPPKPQSSPQTLVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTI 163
+ +S L + TST + TSA P+V+T G + + + + V T
Sbjct: 4678 MTTTQTGSSGATSKIPLALDTST--LETSAGTPSVVTEGFAHSKITTAMNNDVKDVSQTN 4735
Query: 164 P----SVSLPNKMGGLKTIPVVVQSLPMVYTTLP---ADGGPAAITVPLIGGDGKNAGSV 216
P S P+ PV+V +LP P + P +++ L K AG V
Sbjct: 4736 PPFQDEASSPSSQA-----PVLVTTLPSSVAFTPQWHSTSSPVSMSSVLTSSLVKTAGKV 4790
Query: 217 --KVDPTSMSPLEIPSDSEESTIESGSS 242
++ + SP + + ++ ++ S ++
Sbjct: 4791 DTSLETVTSSPQSMSNTLDDISVTSAAT 4818
Score = 30.0 bits (66), Expect = 2.1
Identities = 50/226 (22%), Positives = 86/226 (38%), Gaps = 35/226 (15%)
Query: 19 GGSMQVFKQVTASVRNRDPPEIEYRSNMTS----PTLLDANPMENPALFNDIKIEPPEEL 74
GG+ ++ TA + R+ +T+ PTL P+ A P E +
Sbjct: 10467 GGTKRMETTTTALKTTTTALKTTSRATLTTSVYTPTLGTLTPLN--ASMQMASTIPTEMM 10524
Query: 75 LASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDMSTS-- 132
+ + + P V P+ A+ L A P+++P + T+ S
Sbjct: 10525 ITTPYVFPDV---------PETTSSLATSLGAETSTALPRTTPSVFNRESETTASLVSRS 10575
Query: 133 -ANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQS-LPMVYT 190
A V+ V +S T + ++H TIP+VS KT P S L V +
Sbjct: 10576 GAERSPVIQTLDVSSSEPDTTASWVIHPAETIPTVS--------KTTPNFFHSELDTVSS 10627
Query: 191 TLPADGGPAAITVPLIGGDGKNAGSVKVDPTSMSPLEIPSDSEEST 236
T + G + +P N ++D +++PL S ++ ST
Sbjct: 10628 TATSHGADVSSAIP------TNISPSELD--ALTPLVTISGTDTST 10665
Score = 28.9 bits (63), Expect = 4.6
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 70 PPEELLASDFSLPQVEPVDLSFHKPKAPLQPASMLQAPIRPPKPQSSPQTLVVSTSTSDM 129
PP E +S FSL + P ++ P + P S+ +P+ P ++ T V+ T+T+ +
Sbjct: 5623 PPVEETSSGFSL--MSP-SMTSPSPVSSTSPESIPSSPL----PVTALLTSVLVTTTNVL 5675
Query: 130 STSANIPTVLTPGSV-------LTSSQSTGSQQILHV-IHTIPSVS 167
T++ P +P ++ LT+ + T + +H +HT +V+
Sbjct: 5676 GTTSPEPVTSSPPNLSSPTQERLTTYKDTAHTEAMHASMHTNTAVA 5721
Score = 28.5 bits (62), Expect = 6.0
Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 30/141 (21%)
Query: 120 LVVSTSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLP--------NK 171
L +S+ +S MST A P + TP L+ S++ S I S +L +
Sbjct: 1474 LDISSPSSPMSTFAIFPPMSTPSHELSKSEADTS-----AIRNTDSTTLDQHLGIRSLGR 1528
Query: 172 MGGLKTIPV---------VVQSLPMVYTTLPADGGPAAITVPLIGGDGKNAGSVKVDPTS 222
G L T+P+ V++ TL A P +T L K+ S+ P S
Sbjct: 1529 TGDLTTVPITPLTTTWTSVIEHSTQAQDTLSATMSPTHVTQSL-----KDQTSI---PAS 1580
Query: 223 MSPLEIPSDSEESTIESGSSA 243
SP + E + SS+
Sbjct: 1581 ASPSHLTEVYPELGTQGRSSS 1601
Score = 28.1 bits (61), Expect = 7.9
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 99 QPASMLQAPIRPPKPQSS------PQTLVVSTSTSDMSTSANIPTVLTPGSVLTS 147
+P+S+ PP Q S P + + S S+SA++ ++LTPG V T+
Sbjct: 7380 RPSSLPVEETSPPSSQLSLSAMISPSPVSSTLPASSHSSSASVTSLLTPGQVKTT 7434
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 33.9 bits (76), Expect = 0.14
Identities = 38/144 (26%), Positives = 56/144 (38%), Gaps = 17/144 (11%)
Query: 13 VQLNSEGGSMQVFKQVTASVRNRDPPE---IEYRSNMTSPTLLDANPMENPALFNDIKIE 69
V L + G +Q V + RNR+ Y+ + T L + +PA
Sbjct: 1437 VPLRALGQRVQCSPDVGLTCRNREQASGLCYNYQIRVQCCTPLACSTSSSPAQTTPPTTS 1496
Query: 70 PPEELLASDFSLPQVEPVDLSFHKPKAPLQP--ASMLQAPIRPPKPQSSPQTLVVSTSTS 127
E AS S P P +S + P A+ ++ P P P +TSTS
Sbjct: 1497 KTTETRASGSSAPSSTPGTVSLSTARTTPAPGTATSVKKTFSTPSPPPVP-----ATSTS 1551
Query: 128 DMSTSANIPTVLTPGSVLTSSQST 151
MST+ TPG+ + SS+ T
Sbjct: 1552 SMSTT-------TPGTSVVSSKPT 1568
>gi|67010025 Sp4 transcription factor [Homo sapiens]
Length = 784
Score = 33.9 bits (76), Expect = 0.14
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 123 STSTSDMSTSANIPTVLTPGSVLTSSQSTGSQQILHVIHTIPSVSLPNKMGGLKTIPVVV 182
S+S D+ + + ++LT++ T S IL + + ++P ++ +IP+ +
Sbjct: 186 SSSLQDLQGQIQLISAGNNQAILTAANRTASGNIL--AQNLANQTVPVQIRPGVSIPLQL 243
Query: 183 QSLP----MVYTTLPADGGPAAITVPLIGGDGKNAGSVKV 218
Q+LP V TTLP + G + +P+I G+ +V
Sbjct: 244 QTLPGTQAQVVTTLPINIGGVTLALPVINNVAAGGGTGQV 283
>gi|169214154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 737
Score = 33.5 bits (75), Expect = 0.19
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 102 SMLQAPIRPPKPQS--SPQTLVV--------STSTSDMSTSANIPTVLTPGSVLTSSQST 151
S+L + I P P S S TL + S++TS STS+ I + T + +TS+ ST
Sbjct: 88 SVLSSTITPAPPMSVLSHHTLHITSNSSTSSSSTTSSTSTSSFITSSFTTSTSITSTSST 147
Query: 152 GSQQILHVIHTIPSVSLPNKMGGLKTIPVVVQSLPMVYTTLPADGGPAAITVPLIGGDGK 211
S T S+S+ + +I + S T+ ++ + +T
Sbjct: 148 -SSFTTSTATTSTSISITS----TSSISSSITSTSTSTTSTSSNSTTSTVTSTSTSTSTS 202
Query: 212 NAGSVKVDPTSMSPLEIPSDSEESTIESGSSALQSLQGLQQEREAL 257
+ S TS + S S ST S +S+++ L Q++ AL
Sbjct: 203 TSTSTSSTFTSTTSTSTTSTSTTSTSTSATSSIRKLTPHQKQCGAL 248
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.126 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,885,095
Number of Sequences: 37866
Number of extensions: 563612
Number of successful extensions: 2913
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 2617
Number of HSP's gapped (non-prelim): 493
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.