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Search of human proteins with 226528419
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226528419 short coiled-coil protein isoform 6 [Homo sapiens]
(94 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226528419 short coiled-coil protein isoform 6 [Homo sapiens] 184 1e-47
gi|226528371 short coiled-coil protein isoform 5 [Homo sapiens] 170 3e-43
gi|226528212 short coiled-coil protein isoform 4 [Homo sapiens] 169 3e-43
gi|226528328 short coiled-coil protein isoform 4 [Homo sapiens] 169 3e-43
gi|226528258 short coiled-coil protein isoform 4 [Homo sapiens] 169 3e-43
gi|226528302 short coiled-coil protein isoform 3 [Homo sapiens] 140 2e-34
gi|226528395 short coiled-coil protein isoform 2 [Homo sapiens] 125 6e-30
gi|226528280 short coiled-coil protein isoform 1 [Homo sapiens] 125 7e-30
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 31 0.19
gi|7662352 RUN and FYVE domain containing 3 isoform 2 [Homo sapi... 29 0.93
gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo sap... 29 0.93
gi|195220720 RUN and FYVE domain containing 3 isoform 3 [Homo sa... 29 0.93
gi|38707981 calpain 12 [Homo sapiens] 28 1.2
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 28 1.6
gi|169178850 PREDICTED: similar to coiled-coil domain containing... 28 2.1
gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ... 28 2.1
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 28 2.1
gi|149363632 coiled-coil domain containing 29 [Homo sapiens] 28 2.1
gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens] 27 2.7
gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens] 27 2.7
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 27 2.7
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 27 2.7
gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo ... 27 2.7
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 27 2.7
gi|54234024 vacuolar protein sorting 39 [Homo sapiens] 27 2.7
gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 27 2.7
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 27 3.5
gi|122937345 myosin VB [Homo sapiens] 27 3.5
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 27 3.5
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 27 3.5
>gi|226528419 short coiled-coil protein isoform 6 [Homo sapiens]
Length = 94
Score = 184 bits (468), Expect = 1e-47
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEEN 60
MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEEN
Sbjct: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEEN 60
Query: 61 LKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
LKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
Sbjct: 61 LKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
>gi|226528371 short coiled-coil protein isoform 5 [Homo sapiens]
Length = 121
Score = 170 bits (430), Expect = 3e-43
Identities = 94/121 (77%), Positives = 94/121 (77%), Gaps = 27/121 (22%)
Query: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD------------- 47
MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD
Sbjct: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDVDAENQVELEEKT 60
Query: 48 --------------DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKR 93
DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKR
Sbjct: 61 RLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKR 120
Query: 94 K 94
K
Sbjct: 121 K 121
>gi|226528212 short coiled-coil protein isoform 4 [Homo sapiens]
Length = 122
Score = 169 bits (429), Expect = 3e-43
Identities = 94/122 (77%), Positives = 94/122 (77%), Gaps = 28/122 (22%)
Query: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD------------- 47
MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD
Sbjct: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDAVDAENQVELEEK 60
Query: 48 ---------------DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 92
DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK
Sbjct: 61 TRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 120
Query: 93 RK 94
RK
Sbjct: 121 RK 122
>gi|226528328 short coiled-coil protein isoform 4 [Homo sapiens]
Length = 122
Score = 169 bits (429), Expect = 3e-43
Identities = 94/122 (77%), Positives = 94/122 (77%), Gaps = 28/122 (22%)
Query: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD------------- 47
MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD
Sbjct: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDAVDAENQVELEEK 60
Query: 48 ---------------DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 92
DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK
Sbjct: 61 TRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 120
Query: 93 RK 94
RK
Sbjct: 121 RK 122
>gi|226528258 short coiled-coil protein isoform 4 [Homo sapiens]
Length = 122
Score = 169 bits (429), Expect = 3e-43
Identities = 94/122 (77%), Positives = 94/122 (77%), Gaps = 28/122 (22%)
Query: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD------------- 47
MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMD
Sbjct: 1 MDGSRKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDAVDAENQVELEEK 60
Query: 48 ---------------DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 92
DLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK
Sbjct: 61 TRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSK 120
Query: 93 RK 94
RK
Sbjct: 121 RK 122
>gi|226528302 short coiled-coil protein isoform 3 [Homo sapiens]
Length = 131
Score = 140 bits (353), Expect = 2e-34
Identities = 71/71 (100%), Positives = 71/71 (100%)
Query: 24 DHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSV 83
DHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSV
Sbjct: 61 DHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSV 120
Query: 84 FQTTDTKSKRK 94
FQTTDTKSKRK
Sbjct: 121 FQTTDTKSKRK 131
>gi|226528395 short coiled-coil protein isoform 2 [Homo sapiens]
Length = 158
Score = 125 bits (315), Expect = 6e-30
Identities = 71/98 (72%), Positives = 71/98 (72%), Gaps = 27/98 (27%)
Query: 24 DHSSRILYPRPKSLLPKMMNADMD---------------------------DLSARVDAV 56
DHSSRILYPRPKSLLPKMMNADMD DLSARVDAV
Sbjct: 61 DHSSRILYPRPKSLLPKMMNADMDVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAV 120
Query: 57 KEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
KEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
Sbjct: 121 KEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 158
>gi|226528280 short coiled-coil protein isoform 1 [Homo sapiens]
Length = 159
Score = 125 bits (314), Expect = 7e-30
Identities = 71/99 (71%), Positives = 71/99 (71%), Gaps = 28/99 (28%)
Query: 24 DHSSRILYPRPKSLLPKMMNADMD----------------------------DLSARVDA 55
DHSSRILYPRPKSLLPKMMNADMD DLSARVDA
Sbjct: 61 DHSSRILYPRPKSLLPKMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDA 120
Query: 56 VKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
VKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
Sbjct: 121 VKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 159
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 40 KMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMS 79
K+++ D + LSA V ++ EEN KL SE + L + +E +S
Sbjct: 674 KVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLS 713
>gi|7662352 RUN and FYVE domain containing 3 isoform 2 [Homo
sapiens]
Length = 469
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 38 LPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
L + +NA +++L A+VDA+++ N KL E V I L
Sbjct: 270 LNRHLNATVNNLQAKVDALEKSNTKLTEELAVANNRIITL 309
>gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 620
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 38 LPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
L + +NA +++L A+VDA+++ N KL E V I L
Sbjct: 270 LNRHLNATVNNLQAKVDALEKSNTKLTEELAVANNRIITL 309
>gi|195220720 RUN and FYVE domain containing 3 isoform 3 [Homo
sapiens]
Length = 506
Score = 28.9 bits (63), Expect = 0.93
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 38 LPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
L + +NA +++L A+VDA+++ N KL E V I L
Sbjct: 330 LNRHLNATVNNLQAKVDALEKSNTKLTEELAVANNRIITL 369
>gi|38707981 calpain 12 [Homo sapiens]
Length = 719
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 32 PRPKSLLPKMMNADMDDLSARVDAVK 57
PR +LLP+++ AD LSAR D +
Sbjct: 466 PRSHALLPRLLRADRSPLSARRDVTR 491
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 10 EDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQV 69
EDS T + A S R PRP+S P +L++ + VKE+ +L E
Sbjct: 832 EDSGST--AEAPSFRFSRRPELPRPRSQAPPTGTRPSPELASEAEEVKEKVCRLNQEISR 889
Query: 70 LGQYIENL 77
L Q + L
Sbjct: 890 LNQEVSQL 897
>gi|169178850 PREDICTED: similar to coiled-coil domain containing
29 [Homo sapiens]
Length = 197
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQ 85
+L K + DDL A +AV + + L +NQV+ Q L+S V Q
Sbjct: 29 ILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQ---ELLSMKKVQQ 74
>gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo
sapiens]
Length = 146
Score = 27.7 bits (60), Expect = 2.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQ 85
+L K + DDL A +AV + + L +NQV+ Q L+S V Q
Sbjct: 29 ILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQ---ELLSMKKVQQ 74
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 43 NADMDDLSARV------DAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTK 90
NAD+ D S + + LKL+ ENQ L I+ L AS V + + K
Sbjct: 442 NADLSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDASLVLEESGLK 495
>gi|149363632 coiled-coil domain containing 29 [Homo sapiens]
Length = 161
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQ 72
+L K + DDL+A+ +A+ + + L +NQVL Q
Sbjct: 29 ILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQ 64
>gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens]
Length = 261
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 30 LYPRPKSLLPKMMN------------ADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
L P K+L K+ N A M +L +V ++EEN KL ENQ+L + L
Sbjct: 67 LSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGL 126
Query: 78 M 78
+
Sbjct: 127 V 127
>gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens]
Length = 376
Score = 27.3 bits (59), Expect = 2.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 30 LYPRPKSLLPKMMN------------ADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
L P K+L K+ N A M +L +V ++EEN KL ENQ+L + L
Sbjct: 67 LSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGL 126
Query: 78 M 78
+
Sbjct: 127 V 127
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
+L K + DDL A +AV + + L +N+VL Q L+S V + + K K
Sbjct: 849 ILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNEVLHQ---ELLSMGKVQEKCEKLEKDK 903
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
+L K + DDL A +AV + + L +N+VL Q L+S V + + K K
Sbjct: 878 ILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNEVLHQ---ELLSMGKVQEKCEKLEKDK 932
>gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo
sapiens]
Length = 183
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQ 72
+L K + DDL+A +A+ + + L +NQVL Q
Sbjct: 51 ILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQ 86
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 27.3 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 37 LLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 94
+L K + DDL A +AV + + L +N+VL Q L+S V + + K K
Sbjct: 878 ILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNEVLHQ---ELLSMGKVQEKCEKLEKDK 932
>gi|54234024 vacuolar protein sorting 39 [Homo sapiens]
Length = 875
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 25 HSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENLMSA 80
H S++ + +LLP N ++D+ ++ V EEN + K NQVL +NL+ A
Sbjct: 767 HHSKLDTTKALNLLPA--NTQINDIRIFLEKVLEENAQKKRFNQVL----KNLLHA 816
>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
Length = 725
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 18 SLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLKSENQVLGQYIENL 77
SL D D +S + L + + DM V+ ++EE L LK EN L + +E
Sbjct: 478 SLPPDSDRTSEVY-------LHEELQQDMQKFKNEVNTLEEEFLALKKENVQLHKEVEEE 530
Query: 78 M 78
M
Sbjct: 531 M 531
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 39 PKMMNADMDDLSARVDAVKEENLKLKSEN 67
P + + DD R +++ENLKL SEN
Sbjct: 2044 PSISGIESDDHCQREQELQKENLKLSSEN 2072
>gi|122937345 myosin VB [Homo sapiens]
Length = 1848
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 5 RKEEEEDSTFTNISLADDIDHSSRILYPRPKSLLPKMMNADMDDLSARVDAVKEENLKLK 64
R +EE +S T + A HS R +L + + D+L RV +++EN LK
Sbjct: 980 RLQEEVESLRTELQRA----HSER-------KILEDAHSREKDELRKRVADLEQENALLK 1028
Query: 65 SENQVLGQYI 74
E + L I
Sbjct: 1029 DEKEQLNNQI 1038
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/34 (26%), Positives = 23/34 (67%)
Query: 43 NADMDDLSARVDAVKEENLKLKSENQVLGQYIEN 76
N ++ D+ + + + +E +K+K +N++L + +EN
Sbjct: 867 NRELLDVKKKFEDINQEFVKIKDKNEILKRNLEN 900
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/34 (26%), Positives = 23/34 (67%)
Query: 43 NADMDDLSARVDAVKEENLKLKSENQVLGQYIEN 76
N ++ D+ + + + +E +K+K +N++L + +EN
Sbjct: 880 NRELLDVKKKFEDINQEFVKIKDKNEILKRNLEN 913
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,107,120
Number of Sequences: 37866
Number of extensions: 112659
Number of successful extensions: 499
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 446
Number of HSP's gapped (non-prelim): 60
length of query: 94
length of database: 18,247,518
effective HSP length: 65
effective length of query: 29
effective length of database: 15,786,228
effective search space: 457800612
effective search space used: 457800612
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.