Guide to the Human Genome
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Name: RUFY3 Sequence: fasta or formatted (506aa) NCBI GI: 195220720
Description:

RUN and FYVE domain containing 3 isoform 3

Referenced in:

Additional Interaction Domain Families
Zinc Finger Proteins

Other entries for this name:
alt prot [469aa] RUN and FYVE domain containing 3 isoform 2
alt prot [620aa] RUN and FYVE domain containing 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         42           2
 C cysteine            0.8          4           1
 D aspartate           4.2         21           2
 E glutamate          10.5         53           3
 F phenylalanine       2.4         12           2
 G glycine             7.9         40           4
 H histidine           1.4          7           2
 I isoleucine          3.0         15           2
 K lysine              7.5         38           2
 L leucine            12.3         62           3
 M methionine          3.8         19           2
 N asparagine          4.3         22           2
 P proline             6.5         33           4
 Q glutamine           5.1         26           3
 R arginine            4.9         25           2
 S serine              6.9         35           2
 T threonine           3.6         18           1
 V valine              4.2         21           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RUN and FYVE domain containing 3 isoform 3 
RUFY3                 0.736   RUN and FYVE domain containing 3 isoform 1 
RUFY3                 0.734   RUN and FYVE domain containing 3 isoform 2 
RUFY2                 0.472   RUN and FYVE domain-containing 2 isoform a 
RUFY1                 0.456   RUN and FYVE domain-containing 1 isoform a 
RUFY1                 0.449   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.449   RUN and FYVE domain-containing 1 isoform b 
RUFY2                 0.402   RUN and FYVE domain-containing 2 isoform b 
RUNDC3B               0.102   RUN domain containing 3B isoform c 
RUNDC3B               0.100   RUN domain containing 3B isoform b 
RUNDC3A               0.090   RUN domain containing 3A isoform 3 
RUNDC3B               0.089   RUN domain containing 3B isoform a 
RUNDC3A               0.085   RUN domain containing 3A isoform 1 
RUNDC3A               0.085   RUN domain containing 3A isoform 2 
FYCO1                 0.046   FYVE and coiled-coil domain containing 1 
MYH7                  0.037   myosin, heavy chain 7, cardiac muscle, beta 
MYH3                  0.035   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.035   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.035   myosin, heavy chain 2, skeletal muscle, adult [Homo...
PLEKHM1               0.034   pleckstrin homology domain containing, family M (wit...
MYH13                 0.034   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH1                  0.033   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH7B                 0.032   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH6                  0.031   myosin heavy chain 6 
MYH10                 0.031   myosin, heavy polypeptide 10, non-muscle 
TPR                   0.030   nuclear pore complex-associated protein TPR 
LMNB2                 0.029   lamin B2 
AKAP9                 0.029   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.029   A-kinase anchor protein 9 isoform 3 
MYH8                  0.028   myosin, heavy chain 8, skeletal muscle, perinatal [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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