SCOC 15419

Name: SCOC	Sequence: fasta or formatted (121aa)		NCBI GI: 226528371
Description: short coiled-coil protein isoform 5		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [122aa] short coiled-coil protein isoform 4 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [159aa] short coiled-coil protein isoform 1 alt prot [131aa] short coiled-coil protein isoform 3 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [158aa] short coiled-coil protein isoform 2 alt prot [94aa] short coiled-coil protein isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 6 1 C cysteine 0.0 0 0 D aspartate 9.1 11 2 E glutamate 11.6 14 4 F phenylalanine 1.7 2 1 G glycine 1.7 2 1 H histidine 1.7 2 1 I isoleucine 4.1 5 1 K lysine 8.3 10 1 L leucine 11.6 14 2 M methionine 4.1 5 2 N asparagine 5.8 7 1 P proline 2.5 3 1 Q glutamine 5.0 6 1 R arginine 5.0 6 1 S serine 9.9 12 2 T threonine 5.8 7 2 V valine 5.8 7 1 W tryptophan 0.0 0 0 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short coiled-coil protein isoform 5 SCOC 0.976 short coiled-coil protein isoform 4 SCOC 0.976 short coiled-coil protein isoform 4 SCOC 0.976 short coiled-coil protein isoform 4 SCOC 0.790 short coiled-coil protein isoform 2 SCOC 0.767 short coiled-coil protein isoform 1 SCOC 0.690 short coiled-coil protein isoform 6 SCOC 0.476 short coiled-coil protein isoform 3 MYH10 0.057 myosin, heavy polypeptide 10, non-muscle KIAA0774 0.052 hypothetical protein LOC23281 isoform b KIAA0774 0.052 hypothetical protein LOC23281 isoform a CALCOCO2 0.043 calcium binding and coiled-coil domain 2 CCDC144B 0.043 coiled-coil domain containing 144B CXorf15 0.038 gamma-taxilin HOOK1 0.033 hook homolog 1 HOOK3 0.033 golgi-associated microtubule-binding protein HOOK3 [... GOLGA8B 0.033 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.033 golgi autoantigen, golgin subfamily a, 8A TPR 0.033 nuclear pore complex-associated protein TPR ANKRD26 0.033 ankyrin repeat domain 26 CCDC144A 0.033 coiled-coil domain containing 144A LOC643854 0.029 hypothetical protein LOC643854 CTAGE1 0.029 cutaneous T-cell lymphoma-associated antigen 1 isofo... VAMP7 0.029 vesicle-associated membrane protein 7 isoform 2 [Ho... VAMP7 0.029 vesicle-associated membrane protein 7 isoform 1 [Homo... GCC2 0.029 GRIP and coiled-coil domain-containing 2 CYTSA 0.029 cytospin A CYTSA 0.029 cytospin A MYH9 0.029 myosin, heavy polypeptide 9, non-muscle CUX1 0.029 cut-like homeobox 1 isoform c Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.