SCOC 15415

Name: SCOC	Sequence: fasta or formatted (122aa)		NCBI GI: 226528258
Description: short coiled-coil protein isoform 4		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt mRNA [122aa] short coiled-coil protein isoform 4 alt prot [159aa] short coiled-coil protein isoform 1 alt prot [131aa] short coiled-coil protein isoform 3 alt mRNA [122aa] short coiled-coil protein isoform 4 alt prot [121aa] short coiled-coil protein isoform 5 alt prot [158aa] short coiled-coil protein isoform 2 alt prot [94aa] short coiled-coil protein isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 7 1 C cysteine 0.0 0 0 D aspartate 9.0 11 2 E glutamate 11.5 14 4 F phenylalanine 1.6 2 1 G glycine 1.6 2 1 H histidine 1.6 2 1 I isoleucine 4.1 5 1 K lysine 8.2 10 1 L leucine 11.5 14 2 M methionine 4.1 5 2 N asparagine 5.7 7 1 P proline 2.5 3 1 Q glutamine 4.9 6 1 R arginine 4.9 6 1 S serine 9.8 12 2 T threonine 5.7 7 2 V valine 5.7 7 1 W tryptophan 0.0 0 0 Y tyrosine 1.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short coiled-coil protein isoform 4 SCOC 1.000 short coiled-coil protein isoform 4 SCOC 1.000 short coiled-coil protein isoform 4 SCOC 0.972 short coiled-coil protein isoform 5 SCOC 0.791 short coiled-coil protein isoform 1 SCOC 0.763 short coiled-coil protein isoform 2 SCOC 0.682 short coiled-coil protein isoform 6 SCOC 0.474 short coiled-coil protein isoform 3 KIAA0774 0.043 hypothetical protein LOC23281 isoform b KIAA0774 0.043 hypothetical protein LOC23281 isoform a CCDC88A 0.038 coiled-coil domain containing 88A isoform 2 CCDC88A 0.038 coiled-coil domain containing 88A isoform 1 CALCOCO2 0.038 calcium binding and coiled-coil domain 2 BST2 0.038 bone marrow stromal cell antigen 2 MYH10 0.038 myosin, heavy polypeptide 10, non-muscle HOOK1 0.033 hook homolog 1 CXorf15 0.033 gamma-taxilin TH1L 0.033 TH1-like protein CCDC144B 0.033 coiled-coil domain containing 144B GOLGA8B 0.033 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.033 golgi autoantigen, golgin subfamily a, 8A CUX1 0.033 cut-like homeobox 1 isoform c CUX1 0.033 cut-like homeobox 1 isoform b TPR 0.033 nuclear pore complex-associated protein TPR ANKRD26 0.033 ankyrin repeat domain 26 MYO5C 0.028 myosin VC GCC2 0.028 GRIP and coiled-coil domain-containing 2 CYTSA 0.028 cytospin A CYTSA 0.028 cytospin A LOC643854 0.028 hypothetical protein LOC643854 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.