XBP1 2215

Name: XBP1	Sequence: fasta or formatted (376aa)		NCBI GI: 118640873
Description: X-box binding protein 1 isoform XBP1(S)		Referenced in: CREB / ATF Family RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [261aa] X-box binding protein 1 isoform XBP1(U)
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 37 3 C cysteine 1.1 4 1 D aspartate 4.8 18 2 E glutamate 10.6 40 3 F phenylalanine 1.9 7 2 G glycine 6.1 23 2 H histidine 1.9 7 1 I isoleucine 2.9 11 1 K lysine 4.3 16 2 L leucine 12.5 47 3 M methionine 1.9 7 1 N asparagine 3.5 13 1 P proline 9.0 34 2 Q glutamine 3.7 14 2 R arginine 4.0 15 2 S serine 10.9 41 3 T threonine 2.4 9 1 V valine 7.4 28 3 W tryptophan 0.3 1 1 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 X-box binding protein 1 isoform XBP1(S) XBP1 0.410 X-box binding protein 1 isoform XBP1(U) CEBPD 0.032 CCAAT/enhancer binding protein delta CEBPE 0.031 CCAAT/enhancer binding protein epsilon JUND 0.030 jun D proto-oncogene CREB3L2 0.028 cAMP responsive element binding protein 3-like 2 [Ho... ATF6B 0.028 activating transcription factor 6 beta isoform b [H... ATF6B 0.028 activating transcription factor 6 beta isoform a [Ho... JUN 0.027 jun oncogene BATF3 0.027 basic leucine zipper transcription factor, ATF-like 3... CREM 0.027 cAMP responsive element modulator isoform a CREM 0.027 cAMP responsive element modulator isoform o CREM 0.027 cAMP responsive element modulator isoform m FOSB 0.025 FBJ murine osteosarcoma viral oncogene homolog B is... ATF7 0.025 activating transcription factor 7 isoform 3 ATF7 0.025 activating transcription factor 7 isoform 2 ATF7 0.025 activating transcription factor 7 isoform 1 MAFG 0.025 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... MAFG 0.025 v-maf musculoaponeurotic fibrosarcoma oncogene homol... CREM 0.025 cAMP responsive element modulator isoform k BSN 0.024 bassoon protein ATF6 0.024 activating transcription factor 6 FOSL2 0.024 FOS-like antigen 2 CREB5 0.024 cAMP responsive element binding protein 5 isoform de... CREB5 0.024 cAMP responsive element binding protein 5 isoform be... CREB5 0.024 cAMP responsive element binding protein 5 isoform ga... CREB5 0.024 cAMP responsive element binding protein 5 isoform al... CREB3L1 0.024 cAMP responsive element binding protein 3-like 1 [Ho... NFE2L2 0.024 nuclear factor erythroid 2-like 2 isoform 1 NFE2L2 0.024 nuclear factor erythroid 2-like 2 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.