SCOC 15416

Name: SCOC	Sequence: fasta or formatted (159aa)		NCBI GI: 226528280
Description: short coiled-coil protein isoform 1		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [122aa] short coiled-coil protein isoform 4 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [131aa] short coiled-coil protein isoform 3 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [121aa] short coiled-coil protein isoform 5 alt prot [158aa] short coiled-coil protein isoform 2 alt prot [94aa] short coiled-coil protein isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 10 1 C cysteine 1.3 2 1 D aspartate 5.7 9 1 E glutamate 7.5 12 2 F phenylalanine 3.1 5 2 G glycine 5.0 8 1 H histidine 1.3 2 1 I isoleucine 1.9 3 1 K lysine 5.7 9 1 L leucine 10.7 17 3 M methionine 3.8 6 2 N asparagine 3.8 6 1 P proline 3.8 6 1 Q glutamine 6.3 10 1 R arginine 9.4 15 3 S serine 11.3 18 2 T threonine 3.8 6 2 V valine 6.9 11 1 W tryptophan 1.3 2 1 Y tyrosine 1.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short coiled-coil protein isoform 1 SCOC 0.976 short coiled-coil protein isoform 2 SCOC 0.769 short coiled-coil protein isoform 3 SCOC 0.576 short coiled-coil protein isoform 4 SCOC 0.576 short coiled-coil protein isoform 4 SCOC 0.576 short coiled-coil protein isoform 4 SCOC 0.555 short coiled-coil protein isoform 5 SCOC 0.345 short coiled-coil protein isoform 6 CCDC88A 0.028 coiled-coil domain containing 88A isoform 2 CCDC88A 0.028 coiled-coil domain containing 88A isoform 1 BST2 0.028 bone marrow stromal cell antigen 2 MYH10 0.028 myosin, heavy polypeptide 10, non-muscle CXorf15 0.024 gamma-taxilin KIAA0774 0.024 hypothetical protein LOC23281 isoform b CALCOCO2 0.024 calcium binding and coiled-coil domain 2 KIAA0774 0.024 hypothetical protein LOC23281 isoform a GOLGA8B 0.024 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.024 golgi autoantigen, golgin subfamily a, 8A CUX1 0.024 cut-like homeobox 1 isoform c CUX1 0.024 cut-like homeobox 1 isoform b HOOK1 0.024 hook homolog 1 TPR 0.024 nuclear pore complex-associated protein TPR ANKRD26 0.024 ankyrin repeat domain 26 TXLNB 0.021 taxilin beta MYO5C 0.021 myosin VC GCC2 0.021 GRIP and coiled-coil domain-containing 2 CYTSA 0.021 cytospin A CYTSA 0.021 cytospin A LOC643854 0.021 hypothetical protein LOC643854 CYTSB 0.021 spectrin domain with coiled-coils 1 NSP5a3b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.