| Name: LOC100287836 | Sequence: fasta or formatted (146aa) | NCBI GI: 239747109 | |
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Description: PREDICTED: hypothetical protein XP_002344496
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 2.7 4 1 C cysteine 2.7 4 1 D aspartate 6.2 9 2 E glutamate 13.7 20 3 F phenylalanine 2.1 3 1 G glycine 1.4 2 1 H histidine 2.7 4 1 I isoleucine 4.8 7 1 K lysine 11.6 17 2 L leucine 13.0 19 2 M methionine 6.2 9 1 N asparagine 6.8 10 1 P proline 0.0 0 0 Q glutamine 8.2 12 2 R arginine 0.7 1 1 S serine 6.2 9 2 T threonine 2.7 4 1 V valine 6.8 10 1 W tryptophan 0.0 0 0 Y tyrosine 1.4 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002344496 LOC728897 0.882 PREDICTED: similar to coiled-coil domain containing... LOC728897 0.825 PREDICTED: similar to coiled-coil domain containing... LOC643166 0.821 PREDICTED: similar to hCG1744891 CCDC29 0.768 coiled-coil domain containing 29 LOC100289454 0.764 PREDICTED: hypothetical protein XP_002342954 ANKRD18B 0.730 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.730 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.730 PREDICTED: ankyrin repeat domain 18B ANKRD18A 0.707 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.707 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.707 PREDICTED: ankyrin repeat domain 18A LOC728384 0.574 PREDICTED: similar to coiled-coil domain containing... LOC100132733 0.544 PREDICTED: similar to FLJ00310 protein ANKRD26 0.464 ankyrin repeat domain 26 LOC100131673 0.308 PREDICTED: hypothetical protein LOC100131673 0.308 PREDICTED: hypothetical protein CCDC144A 0.217 coiled-coil domain containing 144A CEP135 0.095 centrosome protein 4 GCC2 0.091 GRIP and coiled-coil domain-containing 2 CCDC88A 0.091 coiled-coil domain containing 88A isoform 2 CCDC88A 0.091 coiled-coil domain containing 88A isoform 1 CENPE 0.084 centromere protein E MYH1 0.076 myosin, heavy chain 1, skeletal muscle, adult [Homo... CALCOCO2 0.076 calcium binding and coiled-coil domain 2 MYH8 0.076 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH4 0.076 myosin, heavy polypeptide 4, skeletal muscle MYH13 0.072 myosin, heavy polypeptide 13, skeletal muscle [Homo... WWC2 0.072 WW and C2 domain containing 2 MYH3 0.068 myosin, heavy chain 3, skeletal muscle, embryonic [H...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
