SCOC 15417

Name: SCOC	Sequence: fasta or formatted (131aa)		NCBI GI: 226528302
Description: short coiled-coil protein isoform 3		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [122aa] short coiled-coil protein isoform 4 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [159aa] short coiled-coil protein isoform 1 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [121aa] short coiled-coil protein isoform 5 alt prot [158aa] short coiled-coil protein isoform 2 alt prot [94aa] short coiled-coil protein isoform 6
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 8 1 C cysteine 1.5 2 1 D aspartate 6.1 8 2 E glutamate 4.6 6 2 F phenylalanine 3.8 5 2 G glycine 6.1 8 1 H histidine 0.8 1 1 I isoleucine 1.5 2 1 K lysine 6.1 8 1 L leucine 9.2 12 3 M methionine 4.6 6 2 N asparagine 3.1 4 1 P proline 4.6 6 1 Q glutamine 5.3 7 1 R arginine 10.7 14 3 S serine 13.7 18 2 T threonine 3.1 4 2 V valine 6.1 8 1 W tryptophan 1.5 2 1 Y tyrosine 1.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short coiled-coil protein isoform 3 SCOC 0.937 short coiled-coil protein isoform 2 SCOC 0.937 short coiled-coil protein isoform 1 SCOC 0.483 short coiled-coil protein isoform 6 SCOC 0.420 short coiled-coil protein isoform 5 SCOC 0.420 short coiled-coil protein isoform 4 SCOC 0.420 short coiled-coil protein isoform 4 SCOC 0.420 short coiled-coil protein isoform 4 GCC2 0.025 GRIP and coiled-coil domain-containing 2 XBP1 0.021 X-box binding protein 1 isoform XBP1(U) XBP1 0.021 X-box binding protein 1 isoform XBP1(S) HNRNPC 0.021 heterogeneous nuclear ribonucleoprotein C isoform a... HNRNPC 0.021 heterogeneous nuclear ribonucleoprotein C isoform a... MLLT4 0.021 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.021 myeloid/lymphoid or mixed-lineage leukemia (trithora... MLLT4 0.021 myeloid/lymphoid or mixed-lineage leukemia (trithora... RUFY3 0.017 RUN and FYVE domain containing 3 isoform 2 RUFY3 0.017 RUN and FYVE domain containing 3 isoform 1 RUFY3 0.017 RUN and FYVE domain containing 3 isoform 3 CAPN12 0.013 calpain 12 PMS1 0.013 postmeiotic segregation 1 isoform c PMS1 0.013 postmeiotic segregation 1 isoform b PMS1 0.013 postmeiotic segregation 1 isoform a LOC342346 0.013 hypothetical protein LOC342346 KCNH4 0.013 potassium voltage-gated channel, subfamily H, member ... LOC728897 0.013 PREDICTED: similar to coiled-coil domain containing... LOC100287836 0.013 PREDICTED: hypothetical protein XP_002344496 VPS39 0.013 vacuolar protein sorting 39 CCDC88C 0.013 DVL-binding protein DAPLE CCDC29 0.013 coiled-coil domain containing 29 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.