SCOC 15421

Name: SCOC	Sequence: fasta or formatted (94aa)		NCBI GI: 226528419
Description: short coiled-coil protein isoform 6		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [122aa] short coiled-coil protein isoform 4 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [159aa] short coiled-coil protein isoform 1 alt prot [131aa] short coiled-coil protein isoform 3 alt prot [122aa] short coiled-coil protein isoform 4 alt prot [121aa] short coiled-coil protein isoform 5 alt prot [158aa] short coiled-coil protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 5 1 C cysteine 0.0 0 0 D aspartate 10.6 10 2 E glutamate 8.5 8 4 F phenylalanine 2.1 2 1 G glycine 2.1 2 1 H histidine 1.1 1 1 I isoleucine 4.3 4 1 K lysine 9.6 9 1 L leucine 9.6 9 2 M methionine 5.3 5 2 N asparagine 5.3 5 1 P proline 3.2 3 1 Q glutamine 3.2 3 1 R arginine 5.3 5 1 S serine 12.8 12 2 T threonine 5.3 5 2 V valine 4.3 4 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short coiled-coil protein isoform 6 SCOC 0.912 short coiled-coil protein isoform 5 SCOC 0.906 short coiled-coil protein isoform 4 SCOC 0.906 short coiled-coil protein isoform 4 SCOC 0.906 short coiled-coil protein isoform 4 SCOC 0.723 short coiled-coil protein isoform 3 SCOC 0.629 short coiled-coil protein isoform 2 SCOC 0.629 short coiled-coil protein isoform 1 GCC2 0.038 GRIP and coiled-coil domain-containing 2 RUFY3 0.025 RUN and FYVE domain containing 3 isoform 2 RUFY3 0.025 RUN and FYVE domain containing 3 isoform 1 RUFY3 0.025 RUN and FYVE domain containing 3 isoform 3 CAPN12 0.019 calpain 12 KCNH4 0.019 potassium voltage-gated channel, subfamily H, member ... LOC728897 0.019 PREDICTED: similar to coiled-coil domain containing... LOC100287836 0.019 PREDICTED: hypothetical protein XP_002344496 CCDC88C 0.019 DVL-binding protein DAPLE CCDC29 0.019 coiled-coil domain containing 29 XBP1 0.013 X-box binding protein 1 isoform XBP1(U) XBP1 0.013 X-box binding protein 1 isoform XBP1(S) ANKRD18B 0.013 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.013 PREDICTED: ankyrin repeat domain 18B LOC100289454 0.013 PREDICTED: hypothetical protein XP_002342954 ANKRD18B 0.013 PREDICTED: ankyrin repeat domain 18B VPS39 0.013 vacuolar protein sorting 39 CCDC144B 0.013 coiled-coil domain containing 144B CEP290 0.013 centrosomal protein 290kDa MYO5B 0.013 myosin VB UACA 0.013 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.013 uveal autoantigen with coiled-coil domains and ankyr... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.