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Search of human proteins with 226498382
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|226498382 tetratricopeptide repeat domain 5 [Homo sapiens]
(440 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|226498382 tetratricopeptide repeat domain 5 [Homo sapiens] 875 0.0
gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens] 54 2e-07
gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens] 54 2e-07
gi|89179321 smooth muscle cell associated protein-1 isoform 3 [H... 40 0.003
gi|29725607 smooth muscle cell associated protein-1 isoform 2 [H... 40 0.003
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 40 0.004
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 40 0.004
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 39 0.007
gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens] 38 0.021
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 35 0.10
gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens] 35 0.10
gi|118766328 transmembrane and tetratricopeptide repeat containi... 35 0.10
gi|118766330 transmembrane and tetratricopeptide repeat containi... 35 0.10
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 35 0.10
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ... 35 0.18
gi|83415184 transmembrane and tetratricopeptide repeat containin... 35 0.18
gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens] 34 0.23
gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo sap... 34 0.30
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 34 0.30
gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo sap... 34 0.30
gi|153090207 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090203 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090201 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090191 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090182 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|148540145 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090209 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090205 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090199 Golgi-localized syntaphilin-related protein isoform... 34 0.30
gi|153090197 Golgi-localized syntaphilin-related protein isoform... 34 0.30
>gi|226498382 tetratricopeptide repeat domain 5 [Homo sapiens]
Length = 440
Score = 875 bits (2261), Expect = 0.0
Identities = 440/440 (100%), Positives = 440/440 (100%)
Query: 1 MMADEEEEVKPILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEV 60
MMADEEEEVKPILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEV
Sbjct: 1 MMADEEEEVKPILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEV 60
Query: 61 VGSVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVA 120
VGSVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVA
Sbjct: 61 VGSVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVA 120
Query: 121 AAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGR 180
AAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGR
Sbjct: 121 AAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGR 180
Query: 181 SWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240
SWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY
Sbjct: 181 SWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240
Query: 241 GEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAH 300
GEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAH
Sbjct: 241 GEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAH 300
Query: 301 LGPCSDGHYQSASGQKVTLELKPLSTLQPGVNSGAVILGKVVFSLTTEEKVPFTFGLVDS 360
LGPCSDGHYQSASGQKVTLELKPLSTLQPGVNSGAVILGKVVFSLTTEEKVPFTFGLVDS
Sbjct: 301 LGPCSDGHYQSASGQKVTLELKPLSTLQPGVNSGAVILGKVVFSLTTEEKVPFTFGLVDS 360
Query: 361 DGPCYAVMVYNIVQSWGVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNG 420
DGPCYAVMVYNIVQSWGVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNG
Sbjct: 361 DGPCYAVMVYNIVQSWGVLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVETPLLLVVNG 420
Query: 421 KPQGSSSQAVATVASRPQCE 440
KPQGSSSQAVATVASRPQCE
Sbjct: 421 KPQGSSSQAVATVASRPQCE 440
>gi|32307150 O-linked GlcNAc transferase isoform 2 [Homo sapiens]
Length = 1036
Score = 54.3 bits (129), Expect = 2e-07
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 94 KAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKV-SLQNLSMVLRQ---- 148
+A++L+P +A+ L +KG VA A C++ AL C SL NL+ + R+
Sbjct: 274 RAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 333
Query: 149 ----------LRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQ 198
L E +H + SV Q + +Q + + + ++ Y + G
Sbjct: 334 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 393
Query: 199 NPKISQQ---ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
K Q AL Y +A +++ + D H N A++HK + EA+ + A L P
Sbjct: 394 TLKEMQDVQGALQCYTRAIQIN---PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 450
Query: 256 AWPEPRQREQQLLEFLDRLTSLLESKGK----VKTKKLQSMLGSLRPAH--LGPCSDGHY 309
+P+ L+ + T E K V + ++ L S+ P H L P S G
Sbjct: 451 DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFR 510
Query: 310 QSASGQKVTLELKPLSTL 327
++ + + L L ++ L
Sbjct: 511 KAIAERHGNLCLDKINVL 528
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/191 (19%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRN----KVSLQNL 142
+A E A++L+P+ ++ + L GD+ A + AL + + + L NL
Sbjct: 97 EAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 156
Query: 143 -----------SMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLS 191
+ L+ + T + + V A+ + + +H L ++L
Sbjct: 157 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD 216
Query: 192 LYFSTG---QNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y + G + +I +A++AY +A + + ++ +H N A ++ + A++ +
Sbjct: 217 AYINLGNVLKEARIFDRAVAAYLRALSL---SPNHAVVHGNLACVYYEQGLIDLAIDTYR 273
Query: 249 RAAALDPAWPE 259
RA L P +P+
Sbjct: 274 RAIELQPHFPD 284
Score = 32.0 bits (71), Expect = 1.1
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQ-NLSMV 145
+A+ KA++ +P AW+ LG V+ +G++ A F A+T N + NL V
Sbjct: 165 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV 224
Query: 146 LRQLRTDTEDEHSHHVMDSVRQAKL-AVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQ 204
L++ R + D A L A+ + + ++ + +Y+ G +
Sbjct: 225 LKEAR----------IFDRAVAAYLRALSLSPNHA----VVHGNLACVYYEQG----LID 266
Query: 205 QALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
A+ Y +A ++ PD + N A K + S EA + ++ A L P
Sbjct: 267 LAIDTYRRAIELQ---PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 314
>gi|32307148 O-linked GlcNAc transferase isoform 1 [Homo sapiens]
Length = 1046
Score = 54.3 bits (129), Expect = 2e-07
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 27/258 (10%)
Query: 94 KAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKV-SLQNLSMVLRQ---- 148
+A++L+P +A+ L +KG VA A C++ AL C SL NL+ + R+
Sbjct: 284 RAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNI 343
Query: 149 ----------LRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQ 198
L E +H + SV Q + +Q + + + ++ Y + G
Sbjct: 344 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 403
Query: 199 NPKISQQ---ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
K Q AL Y +A +++ + D H N A++HK + EA+ + A L P
Sbjct: 404 TLKEMQDVQGALQCYTRAIQIN---PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 460
Query: 256 AWPEPRQREQQLLEFLDRLTSLLESKGK----VKTKKLQSMLGSLRPAH--LGPCSDGHY 309
+P+ L+ + T E K V + ++ L S+ P H L P S G
Sbjct: 461 DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFR 520
Query: 310 QSASGQKVTLELKPLSTL 327
++ + + L L ++ L
Sbjct: 521 KAIAERHGNLCLDKINVL 538
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/191 (19%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRN----KVSLQNL 142
+A E A++L+P+ ++ + L GD+ A + AL + + + L NL
Sbjct: 107 EAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNL 166
Query: 143 -----------SMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLS 191
+ L+ + T + + V A+ + + +H L ++L
Sbjct: 167 LKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD 226
Query: 192 LYFSTG---QNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y + G + +I +A++AY +A + + ++ +H N A ++ + A++ +
Sbjct: 227 AYINLGNVLKEARIFDRAVAAYLRALSL---SPNHAVVHGNLACVYYEQGLIDLAIDTYR 283
Query: 249 RAAALDPAWPE 259
RA L P +P+
Sbjct: 284 RAIELQPHFPD 294
Score = 32.0 bits (71), Expect = 1.1
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQ-NLSMV 145
+A+ KA++ +P AW+ LG V+ +G++ A F A+T N + NL V
Sbjct: 175 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV 234
Query: 146 LRQLRTDTEDEHSHHVMDSVRQAKL-AVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQ 204
L++ R + D A L A+ + + ++ + +Y+ G +
Sbjct: 235 LKEAR----------IFDRAVAAYLRALSLSPNHA----VVHGNLACVYYEQG----LID 276
Query: 205 QALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
A+ Y +A ++ PD + N A K + S EA + ++ A L P
Sbjct: 277 LAIDTYRRAIELQ---PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCP 324
>gi|89179321 smooth muscle cell associated protein-1 isoform 3 [Homo
sapiens]
Length = 929
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQ 265
AL+AY QA +D LH NRA H E Y +A S+A D + R
Sbjct: 25 ALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 84
Query: 266 QLLEFLDRLTSL---------LESKGKVKTKKLQSMLGSLR 297
Q LE L RL LE K KV + L+++ G ++
Sbjct: 85 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIGGQIQ 125
>gi|29725607 smooth muscle cell associated protein-1 isoform 2 [Homo
sapiens]
Length = 944
Score = 40.4 bits (93), Expect = 0.003
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQ 265
AL+AY QA +D LH NRA H E Y +A S+A D + R
Sbjct: 40 ALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 99
Query: 266 QLLEFLDRLTSL---------LESKGKVKTKKLQSMLGSLR 297
Q LE L RL LE K KV + L+++ G ++
Sbjct: 100 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIGGQIQ 140
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 40.0 bits (92), Expect = 0.004
Identities = 65/320 (20%), Positives = 130/320 (40%), Gaps = 50/320 (15%)
Query: 12 ILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEVVGSVQGKAQVL 71
++ LQ+ ++L + D S+++ +V+ E+E+ QQ EE + +++ + ++
Sbjct: 452 LIASLQDSQERLQNELD--LTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEEEKL- 508
Query: 72 MLTGKALNVTPDYSPK-AEELLSKAVKLEPEL--------VEAWNQLGEVYWKKGDVAAA 122
K + D K E L + KL EL A +QL ++ K + AA
Sbjct: 509 ----KVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQL--KDREKNAA 562
Query: 123 HTCFSGALTHCRNKVSL--QNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGR 180
+ + N++SL QNL + L Q +T + + + R + +++ +
Sbjct: 563 RDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQ 622
Query: 181 SWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240
L +++ + + + + Q+AL + Q + + A L ++++
Sbjct: 623 RHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQK--------------HSAELQSLKDAH 668
Query: 241 GEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAH 300
E++EGF ++E Q L F LE +GK L+S L A
Sbjct: 669 RESMEGFRIEM----------EQELQTLRFE------LEDEGKAMLASLRSELNHQHAAA 712
Query: 301 LGPCSDGHYQSASGQKVTLE 320
+ H+Q + K+ LE
Sbjct: 713 IDLLRHNHHQELAAAKMELE 732
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 40.0 bits (92), Expect = 0.004
Identities = 65/320 (20%), Positives = 130/320 (40%), Gaps = 50/320 (15%)
Query: 12 ILQKLQELVDQLYSFRDCYFETHSVEDAGRKQQDVQKEMEKTLQQMEEVVGSVQGKAQVL 71
++ LQ+ ++L + D S+++ +V+ E+E+ QQ EE + +++ + ++
Sbjct: 572 LIASLQDSQERLQNELD--LTKDSLKETKDALLNVEGELEQERQQHEETIAAMKEEEKL- 628
Query: 72 MLTGKALNVTPDYSPK-AEELLSKAVKLEPEL--------VEAWNQLGEVYWKKGDVAAA 122
K + D K E L + KL EL A +QL ++ K + AA
Sbjct: 629 ----KVDKMAHDLEIKWTENLRQECSKLREELRLQHEEDKKSAMSQLLQL--KDREKNAA 682
Query: 123 HTCFSGALTHCRNKVSL--QNLSMVLRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGR 180
+ + N++SL QNL + L Q +T + + + R + +++ +
Sbjct: 683 RDSWQKKVEDLLNQISLLKQNLEIQLSQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQ 742
Query: 181 SWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240
L +++ + + + + Q+AL + Q + + A L ++++
Sbjct: 743 RHKSLKEAHVLAFQTMEEEKEKEQRALENHLQQK--------------HSAELQSLKDAH 788
Query: 241 GEALEGFSRAAALDPAWPEPRQREQQLLEFLDRLTSLLESKGKVKTKKLQSMLGSLRPAH 300
E++EGF ++E Q L F LE +GK L+S L A
Sbjct: 789 RESMEGFRIEM----------EQELQTLRFE------LEDEGKAMLASLRSELNHQHAAA 832
Query: 301 LGPCSDGHYQSASGQKVTLE 320
+ H+Q + K+ LE
Sbjct: 833 IDLLRHNHHQELAAAKMELE 852
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 39.3 bits (90), Expect = 0.007
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQ 265
A+ Y +A VD + N L+ NR+ + + Y +AL+ +A L+P WP+ R+
Sbjct: 77 AIVLYNEALAVDPQ---NCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQG 133
Query: 266 QLLEFLDRLTSLLESKGK---VKTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTL 319
L++L R L + K LQ ++G + A P D YQ QK+ L
Sbjct: 134 VALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTYQQL--QKMKL 191
Query: 320 ELKP 323
+ P
Sbjct: 192 DKSP 195
>gi|60685231 tetratricopeptide repeat domain 7B [Homo sapiens]
Length = 843
Score = 37.7 bits (86), Expect = 0.021
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 88 AEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGAL 130
AE++L AV++ E WN LGEV +G+ AAA CF AL
Sbjct: 783 AEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTAL 825
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 35.4 bits (80), Expect = 0.10
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQ 265
AL Y++A K+D N L+ NR+ + + Y +A E + L P W + R+
Sbjct: 23 ALQCYSEAIKLD---PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKA 79
Query: 266 QLLEFLDR 273
LEFL+R
Sbjct: 80 AALEFLNR 87
>gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]
Length = 914
Score = 35.4 bits (80), Expect = 0.10
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 8 EVKPILQKLQELVDQLYSFRD--CYFETHSVEDAGRKQQ---DVQKEMEKTLQQMEEVVG 62
+++ + +KL+EL ++ + R C+ +T +V ++QQ D KE+ +T QM +
Sbjct: 209 QLEMLQEKLKELEEENMALRSKACHIKTETVTYEEKEQQLVSDCVKELRETNAQMSRMTE 268
Query: 63 SVQGKAQVLMLTGKALNVTPDYSPKAEELLSKAVKLEPELVE 104
+ GK+ L+ Y + LLS+ V L+ +L E
Sbjct: 269 ELSGKSDELI----------RYQEELSSLLSQIVDLQHKLKE 300
>gi|118766328 transmembrane and tetratricopeptide repeat containing
4 isoform 2 [Homo sapiens]
Length = 741
Score = 35.4 bits (80), Expect = 0.10
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVS-LQNLSMV 145
+AEELLS AV+++P+ AW LG V AA + A+ H R NL +
Sbjct: 534 EAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCYYNLGRL 593
Query: 146 LRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQ 205
L + HV D++ + A + +W N+ + L +TG
Sbjct: 594 YADL--------NRHV-DALNAWRNATVLKPEHSLAW----NNMIILLDNTGN------- 633
Query: 206 ALSAYAQAEKVDRKA----SSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
AQAE V R+A ++ L + A + + Y E+ F +A +P
Sbjct: 634 ----LAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANP 683
>gi|118766330 transmembrane and tetratricopeptide repeat containing
4 isoform 1 [Homo sapiens]
Length = 760
Score = 35.4 bits (80), Expect = 0.10
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVS-LQNLSMV 145
+AEELLS AV+++P+ AW LG V AA + A+ H R NL +
Sbjct: 553 EAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEAAEQSYRTAIKHRRKYPDCYYNLGRL 612
Query: 146 LRQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQ 205
L + HV D++ + A + +W N+ + L +TG
Sbjct: 613 YADL--------NRHV-DALNAWRNATVLKPEHSLAW----NNMIILLDNTGN------- 652
Query: 206 ALSAYAQAEKVDRKA----SSNPDLHLNRATLHKYEESYGEALEGFSRAAALDP 255
AQAE V R+A ++ L + A + + Y E+ F +A +P
Sbjct: 653 ----LAQAEAVGREALELIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANP 702
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 35.4 bits (80), Expect = 0.10
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 36/220 (16%)
Query: 46 VQKEMEKTLQQMEEVVGSVQGKAQV-LMLTGKALNVTP---DYSPKAEELLSKAVKLEPE 101
V +E+E TL Q E + ++ + + L LT ++L T DY K+ L++ L +
Sbjct: 144 VDEELEGTLAQGE--LNEMRTRLYLNLGLTFESLQQTALCNDYFRKSI-FLAEQNHLYED 200
Query: 102 LVEAWNQLGEVYWKKGDVAAAHTCFSGA--LTHCRNKVSLQN-LSMVLRQLRTDTED--- 155
L A LG ++W+ G + A C GA H K +++ +V+ Q+ D D
Sbjct: 201 LFRARYNLGTIHWRAGQHSQAMRCLEGARECAHTMRKRFMESECCVVIAQVLQDLGDFLA 260
Query: 156 -----------------------EHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSL 192
++ HV+ VR + + + D + ++ L
Sbjct: 261 AKRALKKAYRLGSQKPVQRAAICQNLQHVLAVVRLQQQLEEAEGRDPQGAMVICEQLGDL 320
Query: 193 YFSTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRAT 232
+ G P+ ++ AE +DR + +H++ AT
Sbjct: 321 FSKAGDFPRAAEAYQKQLRFAELLDRPGAERAIIHVSLAT 360
>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
chromosome [Homo sapiens]
Length = 1401
Score = 34.7 bits (78), Expect = 0.18
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 26/182 (14%)
Query: 48 KEMEKTLQQMEEVVGSVQGKAQVLMLTG---KALNVTPDYSPK---AEELLSKAVKLEPE 101
KE + L Q E + S Q KA VL G +++ D + K A + L K+++ +P
Sbjct: 225 KEAYEQLLQTENL--SAQVKATVLQQLGWMHHTVDLLGDKATKESYAIQYLQKSLEADPN 282
Query: 102 LVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHV 161
++W LG Y G V A + ++ VL Q +
Sbjct: 283 SGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQ--------QQNQP 334
Query: 162 MDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKAS 221
MD+++ AVQ+D +W LG +LY S Q Q A+ Y A + K+
Sbjct: 335 MDALQAYICAVQLDHGHAAAWMDLG----TLYESCNQ----PQDAIKCYLNATR--SKSC 384
Query: 222 SN 223
SN
Sbjct: 385 SN 386
Score = 32.3 bits (72), Expect = 0.88
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 159 HHVMD-----------SVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQAL 207
HH +D +++ + +++ D + G+SWY LG Y S+ K+ Q A
Sbjct: 253 HHTVDLLGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSI-------GKV-QDAF 304
Query: 208 SAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALD 254
+Y Q+ +D K+ ++ D + L++ + +AL+ + A LD
Sbjct: 305 ISYRQS--ID-KSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLD 348
>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
[Homo sapiens]
Length = 774
Score = 34.7 bits (78), Expect = 0.18
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 28/222 (12%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVL 146
+A LL ++K PE +A++ L + ++ A + + +C + L N V
Sbjct: 458 EAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSDLHNNYGVF 517
Query: 147 RQLRTDTEDEHSHHVMDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQA 206
+ T ++ H +++ + V+ GR LY S G+N A
Sbjct: 518 L-VDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGR-----------LYRSLGEN----SMA 561
Query: 207 LSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALDPAWPEPRQREQQ 266
Y +A +V KA L L+ Y EAL+ + AAAL P+ E R Q
Sbjct: 562 EEWYKRALQVAHKAEILSPL----GALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQ 617
Query: 267 LLEFL------DRLTS--LLESKGKVKTKKLQSMLGSLRPAH 300
+L + +++T+ + E G ++ +L S + S + H
Sbjct: 618 VLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIYSKQENH 659
Score = 29.3 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 87 KAEELLSKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGAL 130
KA E AV+L P+ +AW +G + KG +A + AL
Sbjct: 699 KAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERAL 742
>gi|110225358 tetratricopeptide repeat domain 7A [Homo sapiens]
Length = 858
Score = 34.3 bits (77), Expect = 0.23
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 33 THSVEDAGRKQQDVQKEMEKTLQQMEEVVGSVQGKAQVLMLTGKALNVTPDYSPKAEELL 92
+HSV + +V+ +E+ Q +E + +++ G L+ + A+++L
Sbjct: 744 SHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRL-GHKSLAQKVL 802
Query: 93 SKAVKLEPELVEAWNQLGEVYWKKGDVAAAHTCFSGAL 130
AV+ + EAW LGEV +G AA CF AL
Sbjct: 803 RDAVERQSTCHEAWQGLGEVLQAQGQNEAAVDCFLTAL 840
>gi|33188431 tetratricopeptide repeat protein isoform 3 [Homo
sapiens]
Length = 1347
Score = 33.9 bits (76), Expect = 0.30
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 48 KEMEKTLQQMEEVVGSVQGKAQVLMLTG---KALNVTPDYSPK---AEELLSKAVKLEPE 101
KE + L Q E + V KA VL G +++ D + K A + L K+++ +P
Sbjct: 222 KEAYEQLLQTENLPAQV--KATVLQQLGWMHHNMDLVGDKATKESYAIQYLQKSLEADPN 279
Query: 102 LVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHV 161
++W LG Y G V A + ++ VL Q +
Sbjct: 280 SGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQ--------QQNQP 331
Query: 162 MDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKAS 221
MD+++ AVQ+D +W LG +LY S Q Q A+ Y A + R ++
Sbjct: 332 MDALQAYICAVQLDHGHAAAWMDLG----TLYESCNQ----PQDAIKCYLNAARSKRCSN 383
Query: 222 SN 223
++
Sbjct: 384 TS 385
Score = 32.7 bits (73), Expect = 0.67
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 159 HHVMD-----------SVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQAL 207
HH MD +++ + +++ D + G+SWY LG Y S+ K+ Q A
Sbjct: 250 HHNMDLVGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSI-------GKV-QDAF 301
Query: 208 SAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALD 254
+Y Q+ +D K+ ++ D + L++ + +AL+ + A LD
Sbjct: 302 ISYRQS--ID-KSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLD 345
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo
sapiens]
Length = 1079
Score = 33.9 bits (76), Expect = 0.30
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 48 KEMEKTLQQMEEVVGSVQGKAQVLMLTG---KALNVTPDYSPK---AEELLSKAVKLEPE 101
KE + L Q E + V KA VL G +++ D + K A + L K+++ +P
Sbjct: 222 KEAYEQLLQTENLPAQV--KATVLQQLGWMHHNMDLVGDKATKESYAIQYLQKSLEADPN 279
Query: 102 LVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHV 161
++W LG Y G V A + ++ VL Q +
Sbjct: 280 SGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQ--------QQNQP 331
Query: 162 MDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKAS 221
MD+++ AVQ+D +W LG +LY S Q Q A+ Y A + R ++
Sbjct: 332 MDALQAYICAVQLDHGHAAAWMDLG----TLYESCNQ----PQDAIKCYLNAARSKRCSN 383
Query: 222 SN 223
++
Sbjct: 384 TS 385
Score = 32.7 bits (73), Expect = 0.67
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 159 HHVMD-----------SVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQAL 207
HH MD +++ + +++ D + G+SWY LG Y S+ K+ Q A
Sbjct: 250 HHNMDLVGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSI-------GKV-QDAF 301
Query: 208 SAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALD 254
+Y Q+ +D K+ ++ D + L++ + +AL+ + A LD
Sbjct: 302 ISYRQS--ID-KSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLD 345
>gi|33188427 tetratricopeptide repeat protein isoform 2 [Homo
sapiens]
Length = 1240
Score = 33.9 bits (76), Expect = 0.30
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 24/182 (13%)
Query: 48 KEMEKTLQQMEEVVGSVQGKAQVLMLTG---KALNVTPDYSPK---AEELLSKAVKLEPE 101
KE + L Q E + V KA VL G +++ D + K A + L K+++ +P
Sbjct: 222 KEAYEQLLQTENLPAQV--KATVLQQLGWMHHNMDLVGDKATKESYAIQYLQKSLEADPN 279
Query: 102 LVEAWNQLGEVYWKKGDVAAAHTCFSGALTHCRNKVSLQNLSMVLRQLRTDTEDEHSHHV 161
++W LG Y G V A + ++ VL Q +
Sbjct: 280 SGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQ--------QQNQP 331
Query: 162 MDSVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQALSAYAQAEKVDRKAS 221
MD+++ AVQ+D +W LG +LY S Q Q A+ Y A + R ++
Sbjct: 332 MDALQAYICAVQLDHGHAAAWMDLG----TLYESCNQ----PQDAIKCYLNAARSKRCSN 383
Query: 222 SN 223
++
Sbjct: 384 TS 385
Score = 32.7 bits (73), Expect = 0.67
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 22/107 (20%)
Query: 159 HHVMD-----------SVRQAKLAVQMDVHDGRSWYILGNSYLSLYFSTGQNPKISQQAL 207
HH MD +++ + +++ D + G+SWY LG Y S+ K+ Q A
Sbjct: 250 HHNMDLVGDKATKESYAIQYLQKSLEADPNSGQSWYFLGRCYSSI-------GKV-QDAF 301
Query: 208 SAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSRAAALD 254
+Y Q+ +D K+ ++ D + L++ + +AL+ + A LD
Sbjct: 302 ISYRQS--ID-KSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLD 345
>gi|153090207 Golgi-localized syntaphilin-related protein isoform c
[Homo sapiens]
Length = 660
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 247 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 301
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 302 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 361
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 362 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 420
>gi|153090203 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 249 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 303
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 304 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 363
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 364 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 422
>gi|153090201 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 249 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 303
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 304 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 363
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 364 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 422
>gi|153090191 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 249 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 303
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 304 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 363
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 364 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 422
>gi|153090182 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 249 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 303
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 304 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 363
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 364 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 422
>gi|148540145 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 249 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 303
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 304 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 363
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 364 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 422
>gi|153090209 Golgi-localized syntaphilin-related protein isoform d
[Homo sapiens]
Length = 544
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 131 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 185
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 186 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 245
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 246 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 304
>gi|153090205 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 250 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 304
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 305 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 364
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 365 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 423
>gi|153090199 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 250 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 304
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 305 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 364
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 365 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 423
>gi|153090197 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 33.9 bits (76), Expect = 0.30
Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 193 YFSTGQN----PKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248
Y S G+N P +Q L+ Q E R + L + LH+ E E +E S
Sbjct: 250 YMSCGENHGVRPPNPEQYLTPLQQKEVTVRHLKTK--LKESERRLHERES---EIVELKS 304
Query: 249 RAAALDPAW--------------PEPRQREQQLLEFLDRLTSLLESKGK----------V 284
+ A + W E R+ +QL + ++ + S L K K +
Sbjct: 305 QLARMREDWIEEECHRVEAQLALKEARKEIKQLKQVIETMRSSLADKDKGIQKYFVDINI 364
Query: 285 KTKKLQSMLGSLRPAHLGPCSDG---HYQSASGQKVTLELKPLSTLQPGVNSGAVILGK 340
+ KKL+S+L S+ AH G D + S +K PL T+ G++ + G+
Sbjct: 365 QNKKLESLLQSMEMAHSGSLRDELCLDFPCDSPEKSLTLNPPLDTMADGLSLEEQVTGE 423
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,190,170
Number of Sequences: 37866
Number of extensions: 701340
Number of successful extensions: 2311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 2191
Number of HSP's gapped (non-prelim): 219
length of query: 440
length of database: 18,247,518
effective HSP length: 105
effective length of query: 335
effective length of database: 14,271,588
effective search space: 4780981980
effective search space used: 4780981980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.